RNA–Protein interactions for RNA: ENST00000613954.4

ATF3-211, Transcript of activating transcription factor 3, humanhuman

TSL 5 BASIC

Gene ATF3, Length 2,031 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATF3-211ENST00000613954 ANTXR1Q9H6X2 564 aa14.2□□□□□ -0.14
ATF3-211ENST00000613954 TTC21BQ7Z4L5 1316 aa14.2□□□□□ -0.14
ATF3-211ENST00000613954 NWD1Q149M9 1564 aa14.2□□□□□ -0.14
ATF3-211ENST00000613954 PNPLA6Q8IY17 1366 aa14.2□□□□□ -0.14
ATF3-211ENST00000613954 NALCNQ8IZF0 1738 aa14.2□□□□□ -0.14
ATF3-211ENST00000613954 AATKQ6ZMQ8 1374 aa14.19□□□□□ -0.14
ATF3-211ENST00000613954 SLKQ9H2G2 1235 aaPredicted RBP14.19□□□□□ -0.14
ATF3-211ENST00000613954 ADGRL3Q9HAR2 1447 aa14.19□□□□□ -0.14
ATF3-211ENST00000613954 SSH2Q76I76 1423 aa14.18□□□□□ -0.14
ATF3-211ENST00000613954 MYH16Q9H6N6 1097 aa14.18□□□□□ -0.14
ATF3-211ENST00000613954 POLKQ9UBT6 870 aa14.18□□□□□ -0.14
ATF3-211ENST00000613954 ZRANB1Q9UGI0 708 aa14.18□□□□□ -0.14
ATF3-211ENST00000613954 RGPD8O14715 1765 aaPredicted RBP14.17□□□□□ -0.14
ATF3-211ENST00000613954 CT47B1P0C2W7 299 aaPredicted RBP14.17□□□□□ -0.14
ATF3-211ENST00000613954 TCP11L2Q8N4U5 519 aa14.17□□□□□ -0.14
ATF3-211ENST00000613954 PDZRN3Q9UPQ7 1066 aa14.17□□□□□ -0.14
ATF3-211ENST00000613954 TTC21AQ8NDW8 1320 aa14.17□□□□□ -0.14
ATF3-211ENST00000613954 DIAPH1O60610 1272 aaKnown RBP14.17□□□□□ -0.14
ATF3-211ENST00000613954 U2AF1L5P0DN76 240 aaPredicted RBP14.17□□□□□ -0.14
ATF3-211ENST00000613954 U2AF1Q01081 240 aaKnown RBP eCLIP14.17□□□□□ -0.14
ATF3-211ENST00000613954 NGDNQ8NEJ9 315 aaKnown RBP14.17□□□□□ -0.14
ATF3-211ENST00000613954 PCDHB15Q9Y5E8 787 aa14.17□□□□□ -0.14
ATF3-211ENST00000613954 TBC1D2Q9BYX2 928 aa14.16□□□□□ -0.14
ATF3-211ENST00000613954 OVOS2A0A0J9YW53 1432 aa14.15□□□□□ -0.14
ATF3-211ENST00000613954 OVOS2Q6IE36 1432 aa14.15□□□□□ -0.14
ATF3-211ENST00000613954 MAP2P11137 1827 aaKnown RBP14.15□□□□□ -0.14
ATF3-211ENST00000613954 CDK12Q9NYV4 1490 aaPredicted RBP14.15□□□□□ -0.14
ATF3-211ENST00000613954 U2SURPO15042 1029 aaKnown RBP14.14□□□□□ -0.15
ATF3-211ENST00000613954 MVPQ14764 893 aaKnown RBP14.14□□□□□ -0.15
ATF3-211ENST00000613954 KDM4FA0A1W2PPD8 638 aa14.14□□□□□ -0.15
ATF3-211ENST00000613954 RLBP1P12271 317 aa14.14□□□□□ -0.15
ATF3-211ENST00000613954 NEUROD2Q15784 382 aa14.14□□□□□ -0.15
ATF3-211ENST00000613954 ZKSCAN2Q63HK3 967 aa14.14□□□□□ -0.15
ATF3-211ENST00000613954 FBLN1P23142 703 aa14.13□□□□□ -0.15
ATF3-211ENST00000613954 EMILIN1Q9Y6C2 1016 aa14.13□□□□□ -0.15
ATF3-211ENST00000613954 EIF5BO60841 1220 aaKnown RBP14.12□□□□□ -0.15
ATF3-211ENST00000613954 RBM33Q96EV2 1170 aaKnown RBP14.12□□□□□ -0.15
ATF3-211ENST00000613954 PNNQ9H307 717 aaKnown RBP14.12□□□□□ -0.15
ATF3-211ENST00000613954 USP31Q70CQ4 1352 aa14.12□□□□□ -0.15
ATF3-211ENST00000613954 GOLGA6L3A6NEY3 463 aa14.12□□□□□ -0.15
ATF3-211ENST00000613954 C14orf37Q86TY3 774 aa14.12□□□□□ -0.15
ATF3-211ENST00000613954 FTSJ3Q8IY81 847 aaKnown RBP14.12□□□□□ -0.15
ATF3-211ENST00000613954 CHMP5Q9NZZ3 219 aa14.12□□□□□ -0.15
ATF3-211ENST00000613954 RRP7AQ9Y3A4 280 aaKnown RBP14.12□□□□□ -0.15
ATF3-211ENST00000613954 MCM4P33991 863 aa14.11□□□□□ -0.15
ATF3-211ENST00000613954 PROSER2Q86WR7 435 aaPredicted RBP14.11□□□□□ -0.15
ATF3-211ENST00000613954 PHF8Q9UPP1 1060 aa14.11□□□□□ -0.15
ATF3-211ENST00000613954 DZIP1LQ8IYY4 767 aaKnown RBP14.1□□□□□ -0.15
ATF3-211ENST00000613954 PLEKHF1Q96S99 279 aa14.1□□□□□ -0.15
ATF3-211ENST00000613954 C22orf23Q9BZE7 217 aa14.1□□□□□ -0.15
ATF3-211ENST00000613954 HDAC1Q13547 482 aaPredicted RBP14.1□□□□□ -0.15
ATF3-211ENST00000613954 RRS1Q15050 365 aaKnown RBP14.1□□□□□ -0.15
ATF3-211ENST00000613954 FSD2A1L4K1 749 aa14.09□□□□□ -0.15
ATF3-211ENST00000613954 PIK3C2AO00443 1686 aa14.09□□□□□ -0.15
ATF3-211ENST00000613954 FCHSD2O94868 740 aa14.08□□□□□ -0.15
ATF3-211ENST00000613954 IL13P35225 146 aa14.08□□□□□ -0.15
ATF3-211ENST00000613954 HSPA2P54652 639 aa14.08□□□□□ -0.15
ATF3-211ENST00000613954 ISY1Q9ULR0 285 aaKnown RBP14.08□□□□□ -0.15
ATF3-211ENST00000613954 DDX19BQ9UMR2 479 aa14.08□□□□□ -0.15
ATF3-211ENST00000613954 BCL2L13Q9BXK5 485 aa14.08□□□□□ -0.16
ATF3-211ENST00000613954 USP54Q70EL1 1684 aa14.08□□□□□ -0.16
ATF3-211ENST00000613954 LMTK3Q96Q04 1460 aa14.07□□□□□ -0.16
ATF3-211ENST00000613954 DDX11L8A8MPP1 907 aa14.07□□□□□ -0.16
ATF3-211ENST00000613954 TNNQ9UQP3 1299 aa14.07□□□□□ -0.16
ATF3-211ENST00000613954 LRRC7Q96NW7 1537 aa14.07□□□□□ -0.16
ATF3-211ENST00000613954 NCOA3Q9Y6Q9 1424 aa14.06□□□□□ -0.16
ATF3-211ENST00000613954 ESCO1Q5FWF5 840 aa14.06□□□□□ -0.16
ATF3-211ENST00000613954 HSCBQ8IWL3 235 aa14.06□□□□□ -0.16
ATF3-211ENST00000613954 XRCC6P12956 609 aaKnown RBP eCLIP14.05□□□□□ -0.16
ATF3-211ENST00000613954 TMPOP42166 694 aaKnown RBP14.05□□□□□ -0.16
ATF3-211ENST00000613954 C19orf44Q9H6X5 657 aa14.05□□□□□ -0.16
ATF3-211ENST00000613954 MRE11P49959 708 aa14.05□□□□□ -0.16
ATF3-211ENST00000613954 NLRP6P59044 892 aa14.05□□□□□ -0.16
ATF3-211ENST00000613954 RRAGDQ9NQL2 400 aaPredicted RBP14.05□□□□□ -0.16
ATF3-211ENST00000613954 SMC4Q9NTJ3 1288 aa14.05□□□□□ -0.16
ATF3-211ENST00000613954 IL16Q14005 1332 aa14.04□□□□□ -0.16
ATF3-211ENST00000613954 STRCP1A6NGW2 1772 aa14.04□□□□□ -0.16
ATF3-211ENST00000613954 TRAK2O60296 914 aa14.04□□□□□ -0.16
ATF3-211ENST00000613954 MFAP1P55081 439 aaKnown RBP14.04□□□□□ -0.16
ATF3-211ENST00000613954 SMC5Q8IY18 1101 aa14.04□□□□□ -0.16
ATF3-211ENST00000613954 PEAK1Q9H792 1746 aa14.04□□□□□ -0.16
ATF3-211ENST00000613954 PRKAR2BP31323 418 aa14.03□□□□□ -0.16
ATF3-211ENST00000613954 MARF1Q9Y4F3 1742 aaKnown RBP14.03□□□□□ -0.16
ATF3-211ENST00000613954 TMEM94Q12767 1356 aa14.03□□□□□ -0.16
ATF3-211ENST00000613954 PTMSP20962 102 aa14.03□□□□□ -0.16
ATF3-211ENST00000613954 PSME1Q06323 249 aa14.03□□□□□ -0.16
ATF3-211ENST00000613954 ATF7IPQ6VMQ6 1270 aa14.03□□□□□ -0.16
ATF3-211ENST00000613954 ABTB2Q8N961 1025 aa14.03□□□□□ -0.16
ATF3-211ENST00000613954 DCCP43146 1447 aa14.03□□□□□ -0.16
ATF3-211ENST00000613954 SBNO1A3KN83 1393 aa14.02□□□□□ -0.16
ATF3-211ENST00000613954 CLCN1P35523 988 aa14.02□□□□□ -0.16
ATF3-211ENST00000613954 EIF4A2Q14240 407 aaKnown RBP14.02□□□□□ -0.16
ATF3-211ENST00000613954 SNX21Q969T3 373 aa14.02□□□□□ -0.16
ATF3-211ENST00000613954 C1orf167Q5SNV9 1468 aa14.02□□□□□ -0.17
ATF3-211ENST00000613954 MAP3K19Q56UN5 1328 aa14.02□□□□□ -0.17
ATF3-211ENST00000613954 KIF1AQ12756 1690 aa14.02□□□□□ -0.17
ATF3-211ENST00000613954 FLT4P35916 1363 aa14.02□□□□□ -0.17
ATF3-211ENST00000613954 STRCQ7RTU9 1775 aa14.02□□□□□ -0.17
ATF3-211ENST00000613954 SOX12O15370 315 aa14.02□□□□□ -0.17
ATF3-211ENST00000613954 IPO8O15397 1037 aaKnown RBP14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms