RNA–Protein interactions for RNA: ENST00000613575.4

CDKAL1-204, Transcript of CDK5 regulatory subunit associated protein 1 like 1, humanhuman

TSL 1 (best) BASIC

Gene CDKAL1, Length 1,673 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKAL1-204ENST00000613575 TMF1P82094 1093 aa8.69□□□□□ -1.02
CDKAL1-204ENST00000613575 TSR1Q2NL82 804 aaKnown RBP8.69□□□□□ -1.02
CDKAL1-204ENST00000613575 BRPF3Q9ULD4 1205 aa8.69□□□□□ -1.02
CDKAL1-204ENST00000613575 TRPM1Q7Z4N2 1603 aa8.68□□□□□ -1.02
CDKAL1-204ENST00000613575 PRDM15P57071 1507 aaPredicted RBP8.68□□□□□ -1.02
CDKAL1-204ENST00000613575 ZC3H15Q8WU90 426 aaKnown RBP8.68□□□□□ -1.02
CDKAL1-204ENST00000613575 POLR3GLQ9BT43 218 aa8.68□□□□□ -1.02
CDKAL1-204ENST00000613575 SCAPERQ9BY12 1400 aa8.68□□□□□ -1.02
CDKAL1-204ENST00000613575 HMGB1P09429 215 aaKnown RBP8.67□□□□□ -1.02
CDKAL1-204ENST00000613575 PDE3BQ13370 1112 aa8.67□□□□□ -1.02
CDKAL1-204ENST00000613575 C6orf132Q5T0Z8 1188 aa8.67□□□□□ -1.02
CDKAL1-204ENST00000613575 VWDEQ8N2E2 1590 aa8.67□□□□□ -1.02
CDKAL1-204ENST00000613575 NEURL4Q96JN8 1562 aa8.67□□□□□ -1.02
CDKAL1-204ENST00000613575 COL17A1Q9UMD9 1497 aaPredicted RBP8.67□□□□□ -1.02
CDKAL1-204ENST00000613575 CDHR5Q9HBB8 845 aa8.66□□□□□ -1.02
CDKAL1-204ENST00000613575 FANCAO15360 1455 aa8.66□□□□□ -1.02
CDKAL1-204ENST00000613575 ZMYM4Q5VZL5 1548 aa8.66□□□□□ -1.02
CDKAL1-204ENST00000613575 ZFYVE16Q7Z3T8 1539 aa8.66□□□□□ -1.02
CDKAL1-204ENST00000613575 PTPREP23469 700 aa8.65□□□□□ -1.02
CDKAL1-204ENST00000613575 ANP32AP39687 249 aaKnown RBP8.65□□□□□ -1.02
CDKAL1-204ENST00000613575 CDCA8Q53HL2 280 aa8.65□□□□□ -1.02
CDKAL1-204ENST00000613575 PANK3Q9H999 370 aa8.65□□□□□ -1.02
CDKAL1-204ENST00000613575 EIF2AK4Q9P2K8 1649 aaKnown RBP8.65□□□□□ -1.02
CDKAL1-204ENST00000613575 KANK1Q14678 1352 aa8.65□□□□□ -1.02
CDKAL1-204ENST00000613575 TRPM2O94759 1503 aa8.65□□□□□ -1.02
CDKAL1-204ENST00000613575 ABCA9Q8IUA7 1624 aa8.65□□□□□ -1.03
CDKAL1-204ENST00000613575 FCHSD2O94868 740 aa8.65□□□□□ -1.03
CDKAL1-204ENST00000613575 BCL2L12Q9HB09 334 aa8.65□□□□□ -1.03
CDKAL1-204ENST00000613575 ASXL2Q76L83 1435 aa8.64□□□□□ -1.03
CDKAL1-204ENST00000613575 KIF3BO15066 747 aa8.64□□□□□ -1.03
CDKAL1-204ENST00000613575 SECISBP2LQ93073 1101 aaKnown RBP8.64□□□□□ -1.03
CDKAL1-204ENST00000613575 IPO9Q96P70 1041 aaKnown RBP8.64□□□□□ -1.03
CDKAL1-204ENST00000613575 KCNK17Q96T54 332 aa8.64□□□□□ -1.03
CDKAL1-204ENST00000613575 PDCL3Q9H2J4 239 aa8.64□□□□□ -1.03
CDKAL1-204ENST00000613575 ADGRL1O94910 1474 aa8.63□□□□□ -1.03
CDKAL1-204ENST00000613575 NPC1L1Q9UHC9 1359 aa8.63□□□□□ -1.03
CDKAL1-204ENST00000613575 DEPDC5O75140 1603 aa8.63□□□□□ -1.03
CDKAL1-204ENST00000613575 SCAF11Q99590 1463 aaKnown RBP8.63□□□□□ -1.03
CDKAL1-204ENST00000613575 IRX6P78412 446 aaPredicted RBP8.62□□□□□ -1.03
CDKAL1-204ENST00000613575 PTGDRQ13258 359 aa8.62□□□□□ -1.03
CDKAL1-204ENST00000613575 KRI1Q8N9T8 703 aaKnown RBP8.62□□□□□ -1.03
CDKAL1-204ENST00000613575 E9PCH4 1651 aa8.62□□□□□ -1.03
CDKAL1-204ENST00000613575 ATP7AQ04656 1500 aa8.62□□□□□ -1.03
CDKAL1-204ENST00000613575 LMTK2Q8IWU2 1503 aa8.62□□□□□ -1.03
CDKAL1-204ENST00000613575 RGS3P49796 1198 aa8.62□□□□□ -1.03
CDKAL1-204ENST00000613575 ANP32BQ92688 251 aaKnown RBP8.62□□□□□ -1.03
CDKAL1-204ENST00000613575 HIC1Q14526 733 aa8.61□□□□□ -1.03
CDKAL1-204ENST00000613575 ZNF687Q8N1G0 1237 aa8.61□□□□□ -1.03
CDKAL1-204ENST00000613575 ARID3AQ99856 593 aa8.61□□□□□ -1.03
CDKAL1-204ENST00000613575 CCDC9Q9Y3X0 531 aaKnown RBP8.61□□□□□ -1.03
CDKAL1-204ENST00000613575 INO80Q9ULG1 1556 aaPredicted RBP8.61□□□□□ -1.03
CDKAL1-204ENST00000613575 GNPATO15228 680 aa8.6□□□□□ -1.03
CDKAL1-204ENST00000613575 ZMYND10O75800 440 aa8.6□□□□□ -1.03
CDKAL1-204ENST00000613575 CERKQ8TCT0 537 aa8.6□□□□□ -1.03
CDKAL1-204ENST00000613575 NPDC1Q9NQX5 325 aaPredicted RBP8.6□□□□□ -1.03
CDKAL1-204ENST00000613575 AXIN2Q9Y2T1 843 aa8.6□□□□□ -1.03
CDKAL1-204ENST00000613575 MLH3Q9UHC1 1453 aa8.6□□□□□ -1.03
CDKAL1-204ENST00000613575 TET3O43151 1660 aa8.6□□□□□ -1.03
CDKAL1-204ENST00000613575 ARHGAP33O14559 1287 aa8.59□□□□□ -1.03
CDKAL1-204ENST00000613575 GPR37O15354 613 aa8.59□□□□□ -1.03
CDKAL1-204ENST00000613575 COL9A1P20849 921 aa8.59□□□□□ -1.03
CDKAL1-204ENST00000613575 PSEN2P49810 448 aa8.59□□□□□ -1.03
CDKAL1-204ENST00000613575 RNF17Q9BXT8 1623 aaKnown RBP8.59□□□□□ -1.03
CDKAL1-204ENST00000613575 MYOM2P54296 1465 aa8.59□□□□□ -1.03
CDKAL1-204ENST00000613575 NRXN1Q9ULB1 1477 aa8.59□□□□□ -1.03
CDKAL1-204ENST00000613575 PPP1R3GB7ZBB8 358 aa8.59□□□□□ -1.03
CDKAL1-204ENST00000613575 KNSTRNQ9Y448 316 aa8.59□□□□□ -1.03
CDKAL1-204ENST00000613575 RPGRIP1LQ68CZ1 1315 aa8.58□□□□□ -1.04
CDKAL1-204ENST00000613575 MADDQ8WXG6 1647 aa8.58□□□□□ -1.04
CDKAL1-204ENST00000613575 ZNF518AQ6AHZ1 1483 aa8.58□□□□□ -1.04
CDKAL1-204ENST00000613575 CC2D1BQ5T0F9 858 aaKnown RBP8.58□□□□□ -1.04
CDKAL1-204ENST00000613575 B4GALNT3Q6L9W6 998 aa8.58□□□□□ -1.04
CDKAL1-204ENST00000613575 BARGINQ6ZT62 677 aa8.58□□□□□ -1.04
CDKAL1-204ENST00000613575 EIF3AQ14152 1382 aaKnown RBP8.58□□□□□ -1.04
CDKAL1-204ENST00000613575 SBNO2Q9Y2G9 1366 aa8.58□□□□□ -1.04
CDKAL1-204ENST00000613575 BLMP54132 1417 aaPredicted RBP8.57□□□□□ -1.04
CDKAL1-204ENST00000613575 CD109Q6YHK3 1445 aa8.57□□□□□ -1.04
CDKAL1-204ENST00000613575 PPP2R1AP30153 589 aa8.57□□□□□ -1.04
CDKAL1-204ENST00000613575 PBX2P40425 430 aa8.57□□□□□ -1.04
CDKAL1-204ENST00000613575 CFAP70Q5T0N1 1121 aa8.57□□□□□ -1.04
CDKAL1-204ENST00000613575 TICAM2Q86XR7 235 aa8.57□□□□□ -1.04
CDKAL1-204ENST00000613575 SMAP1Q8IYB5 467 aaPredicted RBP8.57□□□□□ -1.04
CDKAL1-204ENST00000613575 CNPY4Q8N129 248 aa8.57□□□□□ -1.04
CDKAL1-204ENST00000613575 PUS7Q96PZ0 661 aaKnown RBP8.57□□□□□ -1.04
CDKAL1-204ENST00000613575 C14orf93Q9H972 538 aaKnown RBP8.57□□□□□ -1.04
CDKAL1-204ENST00000613575 MROH1Q8NDA8 1641 aa8.57□□□□□ -1.04
CDKAL1-204ENST00000613575 ADGRF5Q8IZF2 1346 aa8.57□□□□□ -1.04
CDKAL1-204ENST00000613575 CLTCL1P53675 1640 aa8.56□□□□□ -1.04
CDKAL1-204ENST00000613575 PTMAP06454 111 aaKnown RBP8.56□□□□□ -1.04
CDKAL1-204ENST00000613575 FECHP22830 423 aa8.56□□□□□ -1.04
CDKAL1-204ENST00000613575 POTEEQ6S8J3 1075 aa8.56□□□□□ -1.04
CDKAL1-204ENST00000613575 PNNQ9H307 717 aaKnown RBP8.56□□□□□ -1.04
CDKAL1-204ENST00000613575 RCAN3Q9UKA8 241 aa8.56□□□□□ -1.04
CDKAL1-204ENST00000613575 KIAA1210Q9ULL0 1709 aa8.56□□□□□ -1.04
CDKAL1-204ENST00000613575 TPM2P07951 284 aa8.56□□□□□ -1.04
CDKAL1-204ENST00000613575 PRSS12P56730 875 aa8.56□□□□□ -1.04
CDKAL1-204ENST00000613575 PADI6Q6TGC4 694 aa8.56□□□□□ -1.04
CDKAL1-204ENST00000613575 CDCA7LQ96GN5 454 aa8.56□□□□□ -1.04
CDKAL1-204ENST00000613575 MAP7D2Q96T17 732 aa8.56□□□□□ -1.04
CDKAL1-204ENST00000613575 SLC24A3Q9HC58 644 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms