RNA–Protein interactions for RNA: ENST00000612814.4

SLC46A1-207, Transcript of solute carrier family 46 member 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SLC46A1, Length 6,376 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC46A1-207ENST00000612814 SIL1Q9H173 461 aa15.37■□□□□ 0.05
SLC46A1-207ENST00000612814 GCC1Q96CN9 775 aa15.37■□□□□ 0.05
SLC46A1-207ENST00000612814 SMARCA2P51531 1590 aa15.37■□□□□ 0.05
SLC46A1-207ENST00000612814 LRRCC1Q9C099 1032 aa15.37■□□□□ 0.05
SLC46A1-207ENST00000612814 SYCE3A1L190 88 aa15.36■□□□□ 0.05
SLC46A1-207ENST00000612814 AEBP1Q8IUX7 1158 aa15.36■□□□□ 0.05
SLC46A1-207ENST00000612814 TWISTNBQ3B726 338 aaPredicted RBP15.36■□□□□ 0.05
SLC46A1-207ENST00000612814 CCDC30Q5VVM6 783 aa15.36■□□□□ 0.05
SLC46A1-207ENST00000612814 TAF3Q5VWG9 929 aa15.36■□□□□ 0.05
SLC46A1-207ENST00000612814 SPATA32Q96LK8 384 aa15.36■□□□□ 0.05
SLC46A1-207ENST00000612814 TRERF1Q96PN7 1200 aa15.36■□□□□ 0.05
SLC46A1-207ENST00000612814 GNAI2P04899 355 aa15.35■□□□□ 0.05
SLC46A1-207ENST00000612814 CAMK4Q16566 473 aa15.35■□□□□ 0.05
SLC46A1-207ENST00000612814 TTC39AQ5SRH9 613 aa15.35■□□□□ 0.05
SLC46A1-207ENST00000612814 HIP1O00291 1037 aa15.35■□□□□ 0.05
SLC46A1-207ENST00000612814 PRKAR2BP31323 418 aa15.35■□□□□ 0.05
SLC46A1-207ENST00000612814 JMYQ8N9B5 988 aa15.35■□□□□ 0.05
SLC46A1-207ENST00000612814 SEPT11Q9NVA2 429 aaKnown RBP15.35■□□□□ 0.05
SLC46A1-207ENST00000612814 PPP2R1AP30153 589 aa15.35■□□□□ 0.05
SLC46A1-207ENST00000612814 NUP62CLQ9H1M0 184 aa15.34■□□□□ 0.05
SLC46A1-207ENST00000612814 LUC7LQ9NQ29 371 aaKnown RBP15.34■□□□□ 0.05
SLC46A1-207ENST00000612814 DACH1Q9UI36 760 aa15.34■□□□□ 0.05
SLC46A1-207ENST00000612814 CBFA2T2O43439 604 aa15.33■□□□□ 0.05
SLC46A1-207ENST00000612814 PTPRGP23470 1445 aa15.33■□□□□ 0.05
SLC46A1-207ENST00000612814 ATP2B2Q01814 1243 aa15.33■□□□□ 0.05
SLC46A1-207ENST00000612814 NUP133Q8WUM0 1156 aa15.33■□□□□ 0.05
SLC46A1-207ENST00000612814 STRN4Q9NRL3 753 aa15.33■□□□□ 0.04
SLC46A1-207ENST00000612814 UPF3BQ9BZI7 483 aaKnown RBP15.32■□□□□ 0.04
SLC46A1-207ENST00000612814 SLC4A2P04920 1241 aa15.32■□□□□ 0.04
SLC46A1-207ENST00000612814 KIF6Q6ZMV9 814 aa15.32■□□□□ 0.04
SLC46A1-207ENST00000612814 STIM1Q13586 685 aa15.32■□□□□ 0.04
SLC46A1-207ENST00000612814 UBXN4Q92575 508 aa15.32■□□□□ 0.04
SLC46A1-207ENST00000612814 RBM42Q9BTD8 480 aaKnown RBP15.32■□□□□ 0.04
SLC46A1-207ENST00000612814 PDE3AQ14432 1141 aa15.31■□□□□ 0.04
SLC46A1-207ENST00000612814 NLRP6P59044 892 aa15.31■□□□□ 0.04
SLC46A1-207ENST00000612814 ZSCAN30Q86W11 494 aa15.31■□□□□ 0.04
SLC46A1-207ENST00000612814 PDRG1Q9NUG6 133 aa15.31■□□□□ 0.04
SLC46A1-207ENST00000612814 USP8P40818 1118 aa15.31■□□□□ 0.04
SLC46A1-207ENST00000612814 CHD1LQ86WJ1 897 aa15.31■□□□□ 0.04
SLC46A1-207ENST00000612814 JAKMIP1Q96N16 626 aaKnown RBP15.31■□□□□ 0.04
SLC46A1-207ENST00000612814 CCDC69A6NI79 296 aa15.31■□□□□ 0.04
SLC46A1-207ENST00000612814 EZRP15311 586 aaKnown RBP15.31■□□□□ 0.04
SLC46A1-207ENST00000612814 CEP57L1Q8IYX8 460 aa15.31■□□□□ 0.04
SLC46A1-207ENST00000612814 XPCQ01831 940 aaPredicted RBP15.3■□□□□ 0.04
SLC46A1-207ENST00000612814 ANKRD1Q15327 319 aa15.3■□□□□ 0.04
SLC46A1-207ENST00000612814 KIAA1328Q86T90 577 aa15.3■□□□□ 0.04
SLC46A1-207ENST00000612814 CWC27Q6UX04 472 aaKnown RBP15.3■□□□□ 0.04
SLC46A1-207ENST00000612814 TXLNBQ8N3L3 684 aa15.3■□□□□ 0.04
SLC46A1-207ENST00000612814 TMX1Q9H3N1 280 aa15.3■□□□□ 0.04
SLC46A1-207ENST00000612814 CNNM1Q9NRU3 951 aa15.3■□□□□ 0.04
SLC46A1-207ENST00000612814 GNL3LQ9NVN8 582 aaKnown RBP15.3■□□□□ 0.04
SLC46A1-207ENST00000612814 TMCO3Q6UWJ1 677 aa15.3■□□□□ 0.04
SLC46A1-207ENST00000612814 SKAP1Q86WV1 359 aa15.3■□□□□ 0.04
SLC46A1-207ENST00000612814 TRIM22Q8IYM9 498 aa15.3■□□□□ 0.04
SLC46A1-207ENST00000612814 PIBF1Q8WXW3 757 aa15.3■□□□□ 0.04
SLC46A1-207ENST00000612814 CCDC158Q5M9N0 1113 aa15.29■□□□□ 0.04
SLC46A1-207ENST00000612814 ERC1Q8IUD2 1116 aa15.29■□□□□ 0.04
SLC46A1-207ENST00000612814 DDX11Q96FC9 970 aa15.29■□□□□ 0.04
SLC46A1-207ENST00000612814 SSBP05455 408 aaKnown RBP eCLIP15.29■□□□□ 0.04
SLC46A1-207ENST00000612814 POLR3GO15318 223 aaPredicted RBP15.29■□□□□ 0.04
SLC46A1-207ENST00000612814 EPB41L2O43491 1005 aaKnown RBP15.29■□□□□ 0.04
SLC46A1-207ENST00000612814 DHX8Q14562 1220 aaKnown RBP15.29■□□□□ 0.04
SLC46A1-207ENST00000612814 CFAP100Q494V2 611 aa15.29■□□□□ 0.04
SLC46A1-207ENST00000612814 ESCO1Q5FWF5 840 aa15.29■□□□□ 0.04
SLC46A1-207ENST00000612814 GIMAP7Q8NHV1 300 aa15.29■□□□□ 0.04
SLC46A1-207ENST00000612814 MIA2Q96PC5 1412 aa15.29■□□□□ 0.04
SLC46A1-207ENST00000612814 NUTM2BA6NNL0 878 aaPredicted RBP15.28■□□□□ 0.04
SLC46A1-207ENST00000612814 NUTM2EB1AL46 878 aaPredicted RBP15.28■□□□□ 0.04
SLC46A1-207ENST00000612814 ARHGAP29Q52LW3 1261 aa15.28■□□□□ 0.04
SLC46A1-207ENST00000612814 BLOC1S2Q6QNY1 142 aa15.28■□□□□ 0.04
SLC46A1-207ENST00000612814 NUTM2AQ8IVF1 878 aaPredicted RBP15.28■□□□□ 0.04
SLC46A1-207ENST00000612814 DYDC1Q8WWB3 177 aa15.28■□□□□ 0.04
SLC46A1-207ENST00000612814 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.28■□□□□ 0.04
SLC46A1-207ENST00000612814 CADPSQ9ULU8 1353 aa15.28■□□□□ 0.04
SLC46A1-207ENST00000612814 FERMT3Q86UX7 667 aa15.27■□□□□ 0.04
SLC46A1-207ENST00000612814 ABTB2Q8N961 1025 aa15.27■□□□□ 0.04
SLC46A1-207ENST00000612814 IQCEQ6IPM2 695 aa15.27■□□□□ 0.04
SLC46A1-207ENST00000612814 TICAM2Q86XR7 235 aa15.27■□□□□ 0.04
SLC46A1-207ENST00000612814 MAP3K11Q16584 847 aa15.27■□□□□ 0.03
SLC46A1-207ENST00000612814 IL1RAPL2Q9NP60 686 aa15.27■□□□□ 0.03
SLC46A1-207ENST00000612814 MVPQ14764 893 aaKnown RBP15.27■□□□□ 0.03
SLC46A1-207ENST00000612814 CCDC113Q9H0I3 377 aa15.27■□□□□ 0.03
SLC46A1-207ENST00000612814 CGNQ9P2M7 1197 aaKnown RBP15.27■□□□□ 0.03
SLC46A1-207ENST00000612814 PRDM2Q13029 1718 aa15.26■□□□□ 0.03
SLC46A1-207ENST00000612814 EIF5P55010 431 aaKnown RBP15.26■□□□□ 0.03
SLC46A1-207ENST00000612814 PTPN14Q15678 1187 aa15.26■□□□□ 0.03
SLC46A1-207ENST00000612814 INCENPQ9NQS7 918 aa15.26■□□□□ 0.03
SLC46A1-207ENST00000612814 SOGA3Q5TF21 947 aa15.26■□□□□ 0.03
SLC46A1-207ENST00000612814 CRACR2AQ9BSW2 395 aa15.26■□□□□ 0.03
SLC46A1-207ENST00000612814 FKBP4Q02790 459 aaKnown RBP eCLIP15.26■□□□□ 0.03
SLC46A1-207ENST00000612814 ZHX1Q9UKY1 873 aaPredicted RBP15.26■□□□□ 0.03
SLC46A1-207ENST00000612814 AACSQ86V21 672 aa15.26■□□□□ 0.03
SLC46A1-207ENST00000612814 NACAP1Q9BZK3 213 aa15.26■□□□□ 0.03
SLC46A1-207ENST00000612814 GOLGA6L10A0A0M3HER8 536 aa15.25■□□□□ 0.03
SLC46A1-207ENST00000612814 HDGFL1Q5TGJ6 251 aa15.25■□□□□ 0.03
SLC46A1-207ENST00000612814 GAS2L2Q8NHY3 880 aa15.25■□□□□ 0.03
SLC46A1-207ENST00000612814 CFAP45Q9UL16 551 aa15.25■□□□□ 0.03
SLC46A1-207ENST00000612814 URI1O94763 535 aaPredicted RBP15.25■□□□□ 0.03
SLC46A1-207ENST00000612814 CCDC148Q8NFR7 591 aa15.25■□□□□ 0.03
SLC46A1-207ENST00000612814 SPINK5Q9NQ38 1064 aaPredicted RBP15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms