RNA–Protein interactions for RNA: ENST00000612045.4

CBWD1-220, Transcript of COBW domain containing 1, humanhuman

TSL 1 (best)

Gene CBWD1, Length 1,813 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-220ENST00000612045 DDX17Q92841 729 aaKnown RBP16.18■□□□□ 0.18
CBWD1-220ENST00000612045 SLAIN2Q9P270 581 aa16.18■□□□□ 0.18
CBWD1-220ENST00000612045 NFAT5O94916 1531 aa16.18■□□□□ 0.18
CBWD1-220ENST00000612045 NEFLP07196 543 aa16.17■□□□□ 0.18
CBWD1-220ENST00000612045 PRKAR2BP31323 418 aa16.17■□□□□ 0.18
CBWD1-220ENST00000612045 ALS2Q96Q42 1657 aa16.17■□□□□ 0.18
CBWD1-220ENST00000612045 SLFN5Q08AF3 891 aa16.17■□□□□ 0.18
CBWD1-220ENST00000612045 SLIT3O75094 1523 aa16.16■□□□□ 0.18
CBWD1-220ENST00000612045 HOXC9P31274 260 aa16.16■□□□□ 0.18
CBWD1-220ENST00000612045 TMPOP42166 694 aaKnown RBP16.16■□□□□ 0.18
CBWD1-220ENST00000612045 USP19O94966 1318 aa16.15■□□□□ 0.18
CBWD1-220ENST00000612045 PXDNQ92626 1479 aa16.15■□□□□ 0.18
CBWD1-220ENST00000612045 DUSP27Q5VZP5 1158 aa16.15■□□□□ 0.18
CBWD1-220ENST00000612045 TRMT2AQ8IZ69 625 aaKnown RBP16.15■□□□□ 0.18
CBWD1-220ENST00000612045 RTL1A6NKG5 1358 aa16.15■□□□□ 0.18
CBWD1-220ENST00000612045 E9PSI1 815 aa16.15■□□□□ 0.18
CBWD1-220ENST00000612045 GCP02774 474 aa16.15■□□□□ 0.18
CBWD1-220ENST00000612045 NEFMP07197 916 aa16.15■□□□□ 0.18
CBWD1-220ENST00000612045 FKBP8Q14318 412 aa16.15■□□□□ 0.18
CBWD1-220ENST00000612045 SPINK5Q9NQ38 1064 aaPredicted RBP16.15■□□□□ 0.18
CBWD1-220ENST00000612045 LTN1O94822 1766 aa16.14■□□□□ 0.17
CBWD1-220ENST00000612045 RGPD1P0DJD0 1748 aa16.14■□□□□ 0.17
CBWD1-220ENST00000612045 WDR63Q8IWG1 891 aa16.14■□□□□ 0.17
CBWD1-220ENST00000612045 SULT6B1Q6IMI4 303 aa16.13■□□□□ 0.17
CBWD1-220ENST00000612045 PHACTR3Q96KR7 559 aa16.13■□□□□ 0.17
CBWD1-220ENST00000612045 TNS3Q68CZ2 1445 aa16.13■□□□□ 0.17
CBWD1-220ENST00000612045 AEBP1Q8IUX7 1158 aa16.12■□□□□ 0.17
CBWD1-220ENST00000612045 IP6K1Q92551 441 aa16.12■□□□□ 0.17
CBWD1-220ENST00000612045 ARHGEF10O15013 1369 aa16.12■□□□□ 0.17
CBWD1-220ENST00000612045 RIPK4P57078 832 aa16.12■□□□□ 0.17
CBWD1-220ENST00000612045 RCAN3Q9UKA8 241 aa16.12■□□□□ 0.17
CBWD1-220ENST00000612045 TRIM35Q9UPQ4 493 aa16.12■□□□□ 0.17
CBWD1-220ENST00000612045 SPATA31A3Q5VYP0 1347 aa16.11■□□□□ 0.17
CBWD1-220ENST00000612045 RNF123Q5XPI4 1314 aa16.11■□□□□ 0.17
CBWD1-220ENST00000612045 PLEKHG5O94827 1062 aa16.11■□□□□ 0.17
CBWD1-220ENST00000612045 NFE2L2Q16236 605 aa16.11■□□□□ 0.17
CBWD1-220ENST00000612045 ARHGEF25Q86VW2 580 aa16.11■□□□□ 0.17
CBWD1-220ENST00000612045 LTBP4Q8N2S1 1624 aa16.11■□□□□ 0.17
CBWD1-220ENST00000612045 PHRF1Q9P1Y6 1649 aaKnown RBP16.11■□□□□ 0.17
CBWD1-220ENST00000612045 MED1Q15648 1581 aaPredicted RBP16.1■□□□□ 0.17
CBWD1-220ENST00000612045 EYA1Q99502 592 aa16.1■□□□□ 0.17
CBWD1-220ENST00000612045 IGSF1Q8N6C5 1336 aa16.09■□□□□ 0.17
CBWD1-220ENST00000612045 SOS2Q07890 1332 aaPredicted RBP16.09■□□□□ 0.17
CBWD1-220ENST00000612045 KDRP35968 1356 aa16.09■□□□□ 0.17
CBWD1-220ENST00000612045 ZBTB7CA1YPR0 619 aa16.08■□□□□ 0.17
CBWD1-220ENST00000612045 IRX6P78412 446 aaPredicted RBP16.08■□□□□ 0.16
CBWD1-220ENST00000612045 LTV1Q96GA3 475 aaPredicted RBP16.08■□□□□ 0.16
CBWD1-220ENST00000612045 IL16Q14005 1332 aa16.05■□□□□ 0.16
CBWD1-220ENST00000612045 NHSL1Q5SYE7 1610 aa16.05■□□□□ 0.16
CBWD1-220ENST00000612045 MYH16Q9H6N6 1097 aa16.05■□□□□ 0.16
CBWD1-220ENST00000612045 RRP1P56182 461 aaKnown RBP16.04■□□□□ 0.16
CBWD1-220ENST00000612045 ZC3H6P61129 1189 aaKnown RBP16.04■□□□□ 0.16
CBWD1-220ENST00000612045 CABLES1Q8TDN4 633 aa16.04■□□□□ 0.16
CBWD1-220ENST00000612045 CRYBG1Q9Y4K1 1723 aa16.04■□□□□ 0.16
CBWD1-220ENST00000612045 DLG5Q8TDM6 1919 aa16.03■□□□□ 0.16
CBWD1-220ENST00000612045 LMOD3Q0VAK6 560 aa16.03■□□□□ 0.16
CBWD1-220ENST00000612045 AXIN2Q9Y2T1 843 aa16.03■□□□□ 0.16
CBWD1-220ENST00000612045 ERICH6BQ5W0A0 696 aa16.02■□□□□ 0.16
CBWD1-220ENST00000612045 NBPF6Q5VWK0 638 aa16.01■□□□□ 0.15
CBWD1-220ENST00000612045 NBPF4Q96M43 638 aa16.01■□□□□ 0.15
CBWD1-220ENST00000612045 FANCIQ9NVI1 1328 aa16.01■□□□□ 0.15
CBWD1-220ENST00000612045 CALD1Q05682 793 aaKnown RBP16.01■□□□□ 0.15
CBWD1-220ENST00000612045 USHBP1Q8N6Y0 703 aa16.01■□□□□ 0.15
CBWD1-220ENST00000612045 ANKRD24Q8TF21 1146 aa16.01■□□□□ 0.15
CBWD1-220ENST00000612045 CPDO75976 1380 aa16■□□□□ 0.15
CBWD1-220ENST00000612045 MTHFSDQ2M296 383 aaKnown RBP16■□□□□ 0.15
CBWD1-220ENST00000612045 ROBO1Q9Y6N7 1651 aa16■□□□□ 0.15
CBWD1-220ENST00000612045 TSR2Q969E8 191 aaKnown RBP15.99■□□□□ 0.15
CBWD1-220ENST00000612045 LRRC59Q96AG4 307 aaKnown RBP15.99■□□□□ 0.15
CBWD1-220ENST00000612045 THUMPD2Q9BTF0 503 aaKnown RBP15.99■□□□□ 0.15
CBWD1-220ENST00000612045 FAM83GA6ND36 823 aa15.98■□□□□ 0.15
CBWD1-220ENST00000612045 GAS2L2Q8NHY3 880 aa15.98■□□□□ 0.15
CBWD1-220ENST00000612045 RGPD2P0DJD1 1756 aa15.98■□□□□ 0.15
CBWD1-220ENST00000612045 COL18A1P39060 1754 aa15.98■□□□□ 0.15
CBWD1-220ENST00000612045 KIAA0232Q92628 1395 aa15.98■□□□□ 0.15
CBWD1-220ENST00000612045 ABCC6O95255 1503 aa15.98■□□□□ 0.15
CBWD1-220ENST00000612045 ERBB3P21860 1342 aa15.98■□□□□ 0.15
CBWD1-220ENST00000612045 RGPD5Q99666 1765 aa15.98■□□□□ 0.15
CBWD1-220ENST00000612045 NCAPD2Q15021 1401 aa15.97■□□□□ 0.15
CBWD1-220ENST00000612045 DCTN1Q14203 1278 aa15.97■□□□□ 0.15
CBWD1-220ENST00000612045 IFT57Q9NWB7 429 aa15.97■□□□□ 0.15
CBWD1-220ENST00000612045 AHDC1Q5TGY3 1603 aaPredicted RBP15.96■□□□□ 0.14
CBWD1-220ENST00000612045 PLIN1O60240 522 aa15.96■□□□□ 0.14
CBWD1-220ENST00000612045 GNAI1P63096 354 aa15.96■□□□□ 0.14
CBWD1-220ENST00000612045 CHRNA2Q15822 529 aa15.96■□□□□ 0.14
CBWD1-220ENST00000612045 LAS1LQ9Y4W2 734 aaKnown RBP15.96■□□□□ 0.14
CBWD1-220ENST00000612045 CAMTA1Q9Y6Y1 1673 aa15.95■□□□□ 0.14
CBWD1-220ENST00000612045 CT47B1P0C2W7 299 aaPredicted RBP15.95■□□□□ 0.14
CBWD1-220ENST00000612045 ZNF853P0CG23 659 aa15.95■□□□□ 0.14
CBWD1-220ENST00000612045 EXOSC9Q06265 439 aaKnown RBP15.95■□□□□ 0.14
CBWD1-220ENST00000612045 BCAR3O75815 825 aa15.94■□□□□ 0.14
CBWD1-220ENST00000612045 HAP1P54257 671 aaPredicted RBP15.94■□□□□ 0.14
CBWD1-220ENST00000612045 MCM10Q7L590 875 aa15.94■□□□□ 0.14
CBWD1-220ENST00000612045 CFAP44Q96MT7 982 aa15.94■□□□□ 0.14
CBWD1-220ENST00000612045 ABCA3Q99758 1704 aa15.94■□□□□ 0.14
CBWD1-220ENST00000612045 RARSP54136 660 aaKnown RBP15.94■□□□□ 0.14
CBWD1-220ENST00000612045 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.94■□□□□ 0.14
CBWD1-220ENST00000612045 RTF1Q92541 710 aaKnown RBP15.94■□□□□ 0.14
CBWD1-220ENST00000612045 HTATSF1O43719 755 aaKnown RBP15.93■□□□□ 0.14
CBWD1-220ENST00000612045 PRDM11Q9NQV5 511 aa15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms