RNA–Protein interactions for RNA: ENST00000611963.4

TARDBP-213, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 739 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-213ENST00000611963 NGDNQ8NEJ9 315 aaKnown RBP10.89□□□□□ -0.67
TARDBP-213ENST00000611963 PNISRQ8TF01 805 aaKnown RBP10.89□□□□□ -0.67
TARDBP-213ENST00000611963 POLR3AO14802 1390 aaPredicted RBP10.89□□□□□ -0.67
TARDBP-213ENST00000611963 KIF1AQ12756 1690 aa10.89□□□□□ -0.67
TARDBP-213ENST00000611963 TTC21BQ7Z4L5 1316 aa10.88□□□□□ -0.67
TARDBP-213ENST00000611963 CENPBP07199 599 aaPredicted RBP10.88□□□□□ -0.67
TARDBP-213ENST00000611963 HNRNPUQ00839 825 aaKnown RBP eCLIP10.87□□□□□ -0.67
TARDBP-213ENST00000611963 ZNF772Q68DY9 489 aaPredicted RBP10.87□□□□□ -0.67
TARDBP-213ENST00000611963 PHF8Q9UPP1 1060 aa10.87□□□□□ -0.67
TARDBP-213ENST00000611963 PIK3C2AO00443 1686 aa10.87□□□□□ -0.67
TARDBP-213ENST00000611963 AFF2P51816 1311 aa10.86□□□□□ -0.67
TARDBP-213ENST00000611963 SSH2Q76I76 1423 aa10.86□□□□□ -0.67
TARDBP-213ENST00000611963 ADAMTS2O95450 1211 aa10.86□□□□□ -0.67
TARDBP-213ENST00000611963 EVX2Q03828 476 aa10.86□□□□□ -0.67
TARDBP-213ENST00000611963 C8orf37Q96NL8 207 aa10.86□□□□□ -0.67
TARDBP-213ENST00000611963 SPATA31A3Q5VYP0 1347 aa10.85□□□□□ -0.67
TARDBP-213ENST00000611963 MARF1Q9Y4F3 1742 aaKnown RBP10.85□□□□□ -0.67
TARDBP-213ENST00000611963 HAX1O00165 279 aa10.85□□□□□ -0.67
TARDBP-213ENST00000611963 KRT28Q7Z3Y7 464 aa10.85□□□□□ -0.67
TARDBP-213ENST00000611963 SENP3-EIF4A1A0A087X0R7 540 aa10.84□□□□□ -0.67
TARDBP-213ENST00000611963 FBLN1P23142 703 aa10.84□□□□□ -0.67
TARDBP-213ENST00000611963 MTHFSP49914 203 aa10.84□□□□□ -0.67
TARDBP-213ENST00000611963 COG3Q96JB2 828 aa10.84□□□□□ -0.67
TARDBP-213ENST00000611963 OVOS2A0A0J9YW53 1432 aa10.84□□□□□ -0.67
TARDBP-213ENST00000611963 OVOS2Q6IE36 1432 aa10.84□□□□□ -0.67
TARDBP-213ENST00000611963 WDR43Q15061 677 aaKnown RBP eCLIP10.83□□□□□ -0.68
TARDBP-213ENST00000611963 FNBP4Q8N3X1 1017 aaPredicted RBP10.83□□□□□ -0.68
TARDBP-213ENST00000611963 FARP1Q9Y4F1 1045 aaPredicted RBP10.83□□□□□ -0.68
TARDBP-213ENST00000611963 TRPM3Q9HCF6 1732 aaPredicted RBP10.83□□□□□ -0.68
TARDBP-213ENST00000611963 TNS3Q68CZ2 1445 aa10.83□□□□□ -0.68
TARDBP-213ENST00000611963 TTC21AQ8NDW8 1320 aa10.83□□□□□ -0.68
TARDBP-213ENST00000611963 USP54Q70EL1 1684 aa10.82□□□□□ -0.68
TARDBP-213ENST00000611963 COL3A1P02461 1466 aaPredicted RBP10.82□□□□□ -0.68
TARDBP-213ENST00000611963 NGLY1Q96IV0 654 aa10.82□□□□□ -0.68
TARDBP-213ENST00000611963 BLMP54132 1417 aaPredicted RBP10.82□□□□□ -0.68
TARDBP-213ENST00000611963 SBNO1A3KN83 1393 aa10.81□□□□□ -0.68
TARDBP-213ENST00000611963 PAK3O75914 559 aaPredicted RBP10.81□□□□□ -0.68
TARDBP-213ENST00000611963 RXRBP28702 533 aa10.81□□□□□ -0.68
TARDBP-213ENST00000611963 NUTM2GQ5VZR2 741 aa10.81□□□□□ -0.68
TARDBP-213ENST00000611963 ADAMTS8Q9UP79 889 aa10.81□□□□□ -0.68
TARDBP-213ENST00000611963 CDK12Q9NYV4 1490 aaPredicted RBP10.81□□□□□ -0.68
TARDBP-213ENST00000611963 PSME1Q06323 249 aa10.8□□□□□ -0.68
TARDBP-213ENST00000611963 RRS1Q15050 365 aaKnown RBP10.8□□□□□ -0.68
TARDBP-213ENST00000611963 CFAP53Q96M91 514 aa10.8□□□□□ -0.68
TARDBP-213ENST00000611963 QTRT2Q9H974 415 aaKnown RBP10.8□□□□□ -0.68
TARDBP-213ENST00000611963 POLKQ9UBT6 870 aa10.8□□□□□ -0.68
TARDBP-213ENST00000611963 EMILIN1Q9Y6C2 1016 aa10.8□□□□□ -0.68
TARDBP-213ENST00000611963 PEAK1Q9H792 1746 aa10.8□□□□□ -0.68
TARDBP-213ENST00000611963 BCL9LQ86UU0 1499 aa10.8□□□□□ -0.68
TARDBP-213ENST00000611963 USP31Q70CQ4 1352 aa10.79□□□□□ -0.68
TARDBP-213ENST00000611963 RGS12O14924 1447 aa10.79□□□□□ -0.68
TARDBP-213ENST00000611963 ATRNO75882 1429 aa10.79□□□□□ -0.68
TARDBP-213ENST00000611963 SMG6Q86US8 1419 aaKnown RBP10.79□□□□□ -0.68
TARDBP-213ENST00000611963 PPM1GO15355 546 aaPredicted RBP10.79□□□□□ -0.68
TARDBP-213ENST00000611963 SOX12O15370 315 aa10.79□□□□□ -0.68
TARDBP-213ENST00000611963 CABLES1Q8TDN4 633 aa10.79□□□□□ -0.68
TARDBP-213ENST00000611963 USP21Q9UK80 565 aa10.79□□□□□ -0.68
TARDBP-213ENST00000611963 ALS2Q96Q42 1657 aa10.79□□□□□ -0.68
TARDBP-213ENST00000611963 AATKQ6ZMQ8 1374 aa10.78□□□□□ -0.68
TARDBP-213ENST00000611963 ABCA3Q99758 1704 aa10.78□□□□□ -0.68
TARDBP-213ENST00000611963 NLRP6P59044 892 aa10.78□□□□□ -0.68
TARDBP-213ENST00000611963 RBM6P78332 1123 aaKnown RBP10.78□□□□□ -0.68
TARDBP-213ENST00000611963 CCDC146Q8IYE0 955 aa10.78□□□□□ -0.68
TARDBP-213ENST00000611963 ZBED9Q6R2W3 1325 aa10.78□□□□□ -0.68
TARDBP-213ENST00000611963 SLIT2O94813 1529 aa10.78□□□□□ -0.68
TARDBP-213ENST00000611963 ARHGEF10O15013 1369 aa10.77□□□□□ -0.68
TARDBP-213ENST00000611963 INSRP06213 1382 aa10.77□□□□□ -0.68
TARDBP-213ENST00000611963 LTN1O94822 1766 aa10.77□□□□□ -0.68
TARDBP-213ENST00000611963 ABTB2Q8N961 1025 aa10.77□□□□□ -0.69
TARDBP-213ENST00000611963 PLEKHG5O94827 1062 aa10.76□□□□□ -0.69
TARDBP-213ENST00000611963 MNX1P50219 401 aaPredicted RBP10.76□□□□□ -0.69
TARDBP-213ENST00000611963 TRPC5Q9UL62 973 aaPredicted RBP10.76□□□□□ -0.69
TARDBP-213ENST00000611963 SALL2Q9Y467 1007 aaPredicted RBP10.76□□□□□ -0.69
TARDBP-213ENST00000611963 CRYBG1Q9Y4K1 1723 aa10.75□□□□□ -0.69
TARDBP-213ENST00000611963 LMOD2Q6P5Q4 547 aa10.75□□□□□ -0.69
TARDBP-213ENST00000611963 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.75□□□□□ -0.69
TARDBP-213ENST00000611963 NFAT5O94916 1531 aa10.74□□□□□ -0.69
TARDBP-213ENST00000611963 U2SURPO15042 1029 aaKnown RBP10.74□□□□□ -0.69
TARDBP-213ENST00000611963 DIAPH1O60610 1272 aaKnown RBP10.74□□□□□ -0.69
TARDBP-213ENST00000611963 U2AF1L5P0DN76 240 aaPredicted RBP10.74□□□□□ -0.69
TARDBP-213ENST00000611963 U2AF1Q01081 240 aaKnown RBP eCLIP10.74□□□□□ -0.693e-7■■■□□ 15.3
TARDBP-213ENST00000611963 UPF1Q92900 1129 aaKnown RBP eCLIP10.74□□□□□ -0.692e-11■■■□□ 15.1
TARDBP-213ENST00000611963 MAP3K19Q56UN5 1328 aa10.74□□□□□ -0.69
TARDBP-213ENST00000611963 UNC5CLQ8IV45 518 aa10.73□□□□□ -0.69
TARDBP-213ENST00000611963 PLCD3Q8N3E9 789 aa10.73□□□□□ -0.69
TARDBP-213ENST00000611963 GJD4Q96KN9 370 aaPredicted RBP10.73□□□□□ -0.69
TARDBP-213ENST00000611963 NUDCQ9Y266 331 aa10.73□□□□□ -0.69
TARDBP-213ENST00000611963 GLI3P10071 1580 aa10.73□□□□□ -0.69
TARDBP-213ENST00000611963 PLCH1Q4KWH8 1693 aa10.73□□□□□ -0.69
TARDBP-213ENST00000611963 FAM83GA6ND36 823 aa10.72□□□□□ -0.69
TARDBP-213ENST00000611963 HAP1P54257 671 aaPredicted RBP10.72□□□□□ -0.69
TARDBP-213ENST00000611963 SLIT3O75094 1523 aa10.72□□□□□ -0.69
TARDBP-213ENST00000611963 PHRF1Q9P1Y6 1649 aaKnown RBP10.72□□□□□ -0.69
TARDBP-213ENST00000611963 RGPD5Q99666 1765 aa10.72□□□□□ -0.69
TARDBP-213ENST00000611963 C19orf67A6NJJ6 358 aa10.71□□□□□ -0.69
TARDBP-213ENST00000611963 APAF1O14727 1248 aa10.71□□□□□ -0.69
TARDBP-213ENST00000611963 USP19O94966 1318 aa10.71□□□□□ -0.69
TARDBP-213ENST00000611963 IL13P35225 146 aa10.71□□□□□ -0.69
TARDBP-213ENST00000611963 FLT4P35916 1363 aa10.71□□□□□ -0.69
TARDBP-213ENST00000611963 AMPHP49418 695 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms