RNA–Protein interactions for RNA: ENST00000611640.4

KDM4B-211, Transcript of lysine demethylase 4B, humanhuman

TSL 5 BASIC

Gene KDM4B, Length 5,703 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM4B-211ENST00000611640 ATAD2Q6PL18 1390 aa19.72■□□□□ 0.75
KDM4B-211ENST00000611640 STK3Q13188 491 aa19.71■□□□□ 0.75
KDM4B-211ENST00000611640 CCP110O43303 1012 aa19.71■□□□□ 0.75
KDM4B-211ENST00000611640 SLC52A1Q9NWF4 448 aa19.71■□□□□ 0.75
KDM4B-211ENST00000611640 TMPOP42166 694 aaKnown RBP19.71■□□□□ 0.75
KDM4B-211ENST00000611640 TNMDQ9H2S6 317 aa19.71■□□□□ 0.75
KDM4B-211ENST00000611640 ATP2B1P20020 1258 aa19.7■□□□□ 0.74
KDM4B-211ENST00000611640 TTC39AQ5SRH9 613 aa19.7■□□□□ 0.74
KDM4B-211ENST00000611640 KRT85P78386 507 aa19.7■□□□□ 0.74
KDM4B-211ENST00000611640 RPAP2Q8IXW5 612 aaPredicted RBP19.7■□□□□ 0.74
KDM4B-211ENST00000611640 CCDC158Q5M9N0 1113 aa19.69■□□□□ 0.74
KDM4B-211ENST00000611640 SIL1Q9H173 461 aa19.69■□□□□ 0.74
KDM4B-211ENST00000611640 KIF6Q6ZMV9 814 aa19.69■□□□□ 0.74
KDM4B-211ENST00000611640 RBM10P98175 930 aaKnown RBP19.69■□□□□ 0.74
KDM4B-211ENST00000611640 NFE2L2Q16236 605 aa19.69■□□□□ 0.74
KDM4B-211ENST00000611640 LARP1BQ659C4 914 aaKnown RBP19.68■□□□□ 0.74
KDM4B-211ENST00000611640 CAGE1Q8TC20 777 aa19.68■□□□□ 0.74
KDM4B-211ENST00000611640 SNAPC4Q5SXM2 1469 aa19.68■□□□□ 0.74
KDM4B-211ENST00000611640 PATL2C9JE40 543 aaKnown RBP19.68■□□□□ 0.74
KDM4B-211ENST00000611640 C20orf194Q5TEA3 1177 aa19.68■□□□□ 0.74
KDM4B-211ENST00000611640 TTLL5Q6EMB2 1281 aa19.68■□□□□ 0.74
KDM4B-211ENST00000611640 HMGXB3Q12766 1538 aa19.68■□□□□ 0.74
KDM4B-211ENST00000611640 RRS1Q15050 365 aaKnown RBP19.68■□□□□ 0.74
KDM4B-211ENST00000611640 CDR1P51861 262 aa19.68■□□□□ 0.74
KDM4B-211ENST00000611640 FILIP1LQ4L180 1135 aa19.68■□□□□ 0.74
KDM4B-211ENST00000611640 CCDC43Q96MW1 224 aaKnown RBP19.67■□□□□ 0.74
KDM4B-211ENST00000611640 PTPN23Q9H3S7 1636 aa19.67■□□□□ 0.74
KDM4B-211ENST00000611640 MTMR7Q9Y216 660 aa19.67■□□□□ 0.74
KDM4B-211ENST00000611640 SRGAP3O43295 1099 aa19.66■□□□□ 0.74
KDM4B-211ENST00000611640 EPS15P42566 896 aa19.66■□□□□ 0.74
KDM4B-211ENST00000611640 JMYQ8N9B5 988 aa19.66■□□□□ 0.74
KDM4B-211ENST00000611640 SMARCE1Q969G3 411 aa19.66■□□□□ 0.74
KDM4B-211ENST00000611640 PDRG1Q9NUG6 133 aa19.66■□□□□ 0.74
KDM4B-211ENST00000611640 RRP12Q5JTH9 1297 aaKnown RBP19.66■□□□□ 0.74
KDM4B-211ENST00000611640 ZNF530Q6P9A1 599 aaPredicted RBP19.66■□□□□ 0.74
KDM4B-211ENST00000611640 TATP17735 454 aaPredicted RBP19.66■□□□□ 0.74
KDM4B-211ENST00000611640 NOM1Q5C9Z4 860 aaKnown RBP19.66■□□□□ 0.74
KDM4B-211ENST00000611640 ERCC4Q92889 916 aaPredicted RBP19.66■□□□□ 0.74
KDM4B-211ENST00000611640 NKTRP30414 1462 aaKnown RBP19.66■□□□□ 0.74
KDM4B-211ENST00000611640 DNMBPQ6XZF7 1577 aa19.65■□□□□ 0.74
KDM4B-211ENST00000611640 AACSQ86V21 672 aa19.65■□□□□ 0.74
KDM4B-211ENST00000611640 OFD1O75665 1012 aa19.65■□□□□ 0.74
KDM4B-211ENST00000611640 RARSP54136 660 aaKnown RBP19.65■□□□□ 0.74
KDM4B-211ENST00000611640 DDX24Q9GZR7 859 aaKnown RBP eCLIP19.65■□□□□ 0.741e-6■■■□□ 17.8
KDM4B-211ENST00000611640 ME1P48163 572 aa19.65■□□□□ 0.74
KDM4B-211ENST00000611640 MPNDQ8N594 471 aa19.65■□□□□ 0.74
KDM4B-211ENST00000611640 ZSCAN31Q96LW9 406 aaPredicted RBP19.65■□□□□ 0.74
KDM4B-211ENST00000611640 BLOC1S2Q6QNY1 142 aa19.64■□□□□ 0.74
KDM4B-211ENST00000611640 CWC27Q6UX04 472 aaKnown RBP19.64■□□□□ 0.73
KDM4B-211ENST00000611640 CNNM1Q9NRU3 951 aa19.64■□□□□ 0.73
KDM4B-211ENST00000611640 JAKMIP1Q96N16 626 aaKnown RBP19.64■□□□□ 0.73
KDM4B-211ENST00000611640 IL1RAPL2Q9NP60 686 aa19.64■□□□□ 0.73
KDM4B-211ENST00000611640 FAM177BA6PVY3 158 aa19.64■□□□□ 0.73
KDM4B-211ENST00000611640 SKAP1Q86WV1 359 aa19.64■□□□□ 0.73
KDM4B-211ENST00000611640 ESPNB1AK53 854 aa19.63■□□□□ 0.73
KDM4B-211ENST00000611640 SERPINC1P01008 464 aa19.63■□□□□ 0.73
KDM4B-211ENST00000611640 DHX8Q14562 1220 aaKnown RBP19.63■□□□□ 0.73
KDM4B-211ENST00000611640 CAMSAP2Q08AD1 1489 aa19.63■□□□□ 0.73
KDM4B-211ENST00000611640 TXLNAP40222 546 aa19.63■□□□□ 0.73
KDM4B-211ENST00000611640 RBM42Q9BTD8 480 aaKnown RBP19.63■□□□□ 0.73
KDM4B-211ENST00000611640 CCDC141Q6ZP82 1450 aa19.63■□□□□ 0.73
KDM4B-211ENST00000611640 BRPF1P55201 1214 aaPredicted RBP19.62■□□□□ 0.73
KDM4B-211ENST00000611640 SPATA32Q96LK8 384 aa19.62■□□□□ 0.73
KDM4B-211ENST00000611640 MAGEC2Q9UBF1 373 aaPredicted RBP19.62■□□□□ 0.73
KDM4B-211ENST00000611640 SLC3A2P08195 630 aaKnown RBP19.61■□□□□ 0.73
KDM4B-211ENST00000611640 NCOA1Q15788 1441 aa19.61■□□□□ 0.73
KDM4B-211ENST00000611640 PIP4K2AP48426 406 aaPredicted RBP19.61■□□□□ 0.73
KDM4B-211ENST00000611640 ABCC5O15440 1437 aa19.61■□□□□ 0.73
KDM4B-211ENST00000611640 CT47A1Q5JQC4 288 aaPredicted RBP19.61■□□□□ 0.73
KDM4B-211ENST00000611640 MYL6BP14649 208 aa19.6■□□□□ 0.73
KDM4B-211ENST00000611640 CABP4P57796 275 aa19.6■□□□□ 0.73
KDM4B-211ENST00000611640 MAP3K1Q13233 1512 aa19.6■□□□□ 0.73
KDM4B-211ENST00000611640 ALDH1L2Q3SY69 923 aa19.6■□□□□ 0.73
KDM4B-211ENST00000611640 SSH1Q8WYL5 1049 aa19.6■□□□□ 0.73
KDM4B-211ENST00000611640 CCDC112Q8NEF3 446 aa19.6■□□□□ 0.73
KDM4B-211ENST00000611640 CWC15Q9P013 229 aaKnown RBP19.6■□□□□ 0.73
KDM4B-211ENST00000611640 PPP6R1Q9UPN7 881 aa19.6■□□□□ 0.73
KDM4B-211ENST00000611640 UQCRHLA0A096LP55 91 aa19.6■□□□□ 0.73
KDM4B-211ENST00000611640 UQCRHP07919 91 aa19.6■□□□□ 0.73
KDM4B-211ENST00000611640 SAMD1Q6SPF0 538 aaPredicted RBP19.6■□□□□ 0.73
KDM4B-211ENST00000611640 NUP62CLQ9H1M0 184 aa19.6■□□□□ 0.73
KDM4B-211ENST00000611640 ARHGEF11O15085 1522 aa19.59■□□□□ 0.73
KDM4B-211ENST00000611640 TRIM22Q8IYM9 498 aa19.59■□□□□ 0.73
KDM4B-211ENST00000611640 THUMPD2Q9BTF0 503 aaKnown RBP19.59■□□□□ 0.73
KDM4B-211ENST00000611640 EXOC6BQ9Y2D4 811 aa19.59■□□□□ 0.73
KDM4B-211ENST00000611640 KIAA0586Q9BVV6 1533 aa19.59■□□□□ 0.73
KDM4B-211ENST00000611640 BTBD11A6QL63 1104 aa19.58■□□□□ 0.73
KDM4B-211ENST00000611640 DACH1Q9UI36 760 aa19.58■□□□□ 0.73
KDM4B-211ENST00000611640 CFAP45Q9UL16 551 aa19.58■□□□□ 0.73
KDM4B-211ENST00000611640 NUTM1Q86Y26 1132 aa19.58■□□□□ 0.73
KDM4B-211ENST00000611640 CDK5RAP3Q96JB5 506 aa19.58■□□□□ 0.73
KDM4B-211ENST00000611640 CCDC66A2RUB6 948 aa19.58■□□□□ 0.72
KDM4B-211ENST00000611640 LRPPRCP42704 1394 aaKnown RBP19.58■□□□□ 0.72
KDM4B-211ENST00000611640 SPG7Q9UQ90 795 aa19.58■□□□□ 0.72
KDM4B-211ENST00000611640 IQGAP2Q13576 1575 aa19.58■□□□□ 0.72
KDM4B-211ENST00000611640 ABCC11Q96J66 1382 aa19.58■□□□□ 0.72
KDM4B-211ENST00000611640 KRT32Q14532 448 aa19.57■□□□□ 0.72
KDM4B-211ENST00000611640 PROSER2Q86WR7 435 aaPredicted RBP19.57■□□□□ 0.72
KDM4B-211ENST00000611640 SYCE3A1L190 88 aa19.57■□□□□ 0.72
KDM4B-211ENST00000611640 NACAP1Q9BZK3 213 aa19.57■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms