RNA–Protein interactions for RNA: ENST00000611598.1

PCDHGB1-202, Transcript of protocadherin gamma subfamily B, 1, humanhuman

APPRIS ALT2 BASIC

Gene PCDHGB1, Length 2,592 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1-202ENST00000611598 HMOX1P09601 288 aa18.84■□□□□ 0.61
PCDHGB1-202ENST00000611598 MLH3Q9UHC1 1453 aa18.84■□□□□ 0.61
PCDHGB1-202ENST00000611598 BRPF1P55201 1214 aaPredicted RBP18.84■□□□□ 0.61
PCDHGB1-202ENST00000611598 FAM135BQ49AJ0 1406 aa18.83■□□□□ 0.61
PCDHGB1-202ENST00000611598 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.82■□□□□ 0.6
PCDHGB1-202ENST00000611598 CABP1Q9NZU7 370 aa18.82■□□□□ 0.6
PCDHGB1-202ENST00000611598 TRIM44Q96DX7 344 aaPredicted RBP18.82■□□□□ 0.6
PCDHGB1-202ENST00000611598 PIK3R4Q99570 1358 aa18.82■□□□□ 0.6
PCDHGB1-202ENST00000611598 PTCH1Q13635 1447 aa18.82■□□□□ 0.6
PCDHGB1-202ENST00000611598 SKOR2Q2VWA4 1001 aaPredicted RBP18.81■□□□□ 0.6
PCDHGB1-202ENST00000611598 HDGFL2Q7Z4V5 671 aaPredicted RBP18.81■□□□□ 0.6
PCDHGB1-202ENST00000611598 GSPT1P15170 499 aaKnown RBP18.81■□□□□ 0.6
PCDHGB1-202ENST00000611598 POLKQ9UBT6 870 aa18.81■□□□□ 0.6
PCDHGB1-202ENST00000611598 ZNF428Q96B54 188 aa18.8■□□□□ 0.6
PCDHGB1-202ENST00000611598 NFE2L2Q16236 605 aa18.8■□□□□ 0.6
PCDHGB1-202ENST00000611598 CDK19Q9BWU1 502 aa18.8■□□□□ 0.6
PCDHGB1-202ENST00000611598 ZFYVE9O95405 1425 aa18.79■□□□□ 0.6
PCDHGB1-202ENST00000611598 ABCC4O15439 1325 aa18.79■□□□□ 0.6
PCDHGB1-202ENST00000611598 MBIPQ9NS73 344 aa18.79■□□□□ 0.6
PCDHGB1-202ENST00000611598 CDC42BPGQ6DT37 1551 aa18.79■□□□□ 0.6
PCDHGB1-202ENST00000611598 RAPGEF3O95398 923 aa18.79■□□□□ 0.6
PCDHGB1-202ENST00000611598 ARHGAP45Q92619 1136 aa18.79■□□□□ 0.6
PCDHGB1-202ENST00000611598 CDC45O75419 566 aa18.78■□□□□ 0.6
PCDHGB1-202ENST00000611598 YTHDC2Q9H6S0 1430 aaKnown RBP18.78■□□□□ 0.6
PCDHGB1-202ENST00000611598 MYO5BQ9ULV0 1848 aa18.77■□□□□ 0.6
PCDHGB1-202ENST00000611598 BAG4O95429 457 aaKnown RBP18.77■□□□□ 0.59
PCDHGB1-202ENST00000611598 AK9Q5TCS8 1911 aa18.76■□□□□ 0.59
PCDHGB1-202ENST00000611598 CLTCQ00610 1675 aaKnown RBP18.76■□□□□ 0.59
PCDHGB1-202ENST00000611598 C8orf58Q8NAV2 365 aa18.76■□□□□ 0.59
PCDHGB1-202ENST00000611598 PLEKHM2Q8IWE5 1019 aa18.76■□□□□ 0.59
PCDHGB1-202ENST00000611598 EMILIN1Q9Y6C2 1016 aa18.76■□□□□ 0.59
PCDHGB1-202ENST00000611598 DDX49Q9Y6V7 483 aaKnown RBP18.76■□□□□ 0.59
PCDHGB1-202ENST00000611598 KIF20BQ96Q89 1820 aa18.76■□□□□ 0.59
PCDHGB1-202ENST00000611598 PTMSP20962 102 aa18.75■□□□□ 0.59
PCDHGB1-202ENST00000611598 TWISTNBQ3B726 338 aaPredicted RBP18.75■□□□□ 0.59
PCDHGB1-202ENST00000611598 CHMP4BQ9H444 224 aaKnown RBP18.75■□□□□ 0.59
PCDHGB1-202ENST00000611598 GNAI1P63096 354 aa18.75■□□□□ 0.59
PCDHGB1-202ENST00000611598 IFT57Q9NWB7 429 aa18.75■□□□□ 0.59
PCDHGB1-202ENST00000611598 ZNF853P0CG23 659 aa18.74■□□□□ 0.59
PCDHGB1-202ENST00000611598 NASPP49321 788 aaPredicted RBP18.74■□□□□ 0.59
PCDHGB1-202ENST00000611598 C16orf71Q8IYS4 520 aaPredicted RBP18.74■□□□□ 0.59
PCDHGB1-202ENST00000611598 ARHGEF40Q8TER5 1519 aa18.74■□□□□ 0.59
PCDHGB1-202ENST00000611598 HSP90AA2PQ14568 343 aaPredicted RBP18.74■□□□□ 0.59
PCDHGB1-202ENST00000611598 KLHL40Q2TBA0 621 aa18.74■□□□□ 0.59
PCDHGB1-202ENST00000611598 CLEC17AQ6ZS10 378 aa18.74■□□□□ 0.59
PCDHGB1-202ENST00000611598 FAM83GA6ND36 823 aa18.73■□□□□ 0.59
PCDHGB1-202ENST00000611598 GOLGA6L22H0YM25 854 aa18.73■□□□□ 0.59
PCDHGB1-202ENST00000611598 KNDC1Q76NI1 1749 aa18.73■□□□□ 0.59
PCDHGB1-202ENST00000611598 PKP1Q13835 747 aa18.73■□□□□ 0.59
PCDHGB1-202ENST00000611598 OTUD7AQ8TE49 926 aaPredicted RBP18.72■□□□□ 0.59
PCDHGB1-202ENST00000611598 SLC52A1Q9NWF4 448 aa18.72■□□□□ 0.59
PCDHGB1-202ENST00000611598 CALD1Q05682 793 aaKnown RBP18.71■□□□□ 0.59
PCDHGB1-202ENST00000611598 CCDC173Q0VFZ6 552 aa18.71■□□□□ 0.59
PCDHGB1-202ENST00000611598 MCTP1Q6DN14 999 aa18.71■□□□□ 0.59
PCDHGB1-202ENST00000611598 ARHGAP31Q2M1Z3 1444 aa18.71■□□□□ 0.59
PCDHGB1-202ENST00000611598 IL13P35225 146 aa18.71■□□□□ 0.59
PCDHGB1-202ENST00000611598 DCTN1Q14203 1278 aa18.71■□□□□ 0.59
PCDHGB1-202ENST00000611598 PPP1R9BQ96SB3 815 aa18.71■□□□□ 0.59
PCDHGB1-202ENST00000611598 RABEP1Q15276 862 aa18.7■□□□□ 0.58
PCDHGB1-202ENST00000611598 TTC22Q5TAA0 569 aa18.7■□□□□ 0.58
PCDHGB1-202ENST00000611598 ZRANB1Q9UGI0 708 aa18.7■□□□□ 0.58
PCDHGB1-202ENST00000611598 RRP9O43818 475 aaKnown RBP18.7■□□□□ 0.58
PCDHGB1-202ENST00000611598 TMEM131LA2VDJ0 1609 aa18.69■□□□□ 0.58
PCDHGB1-202ENST00000611598 MAP2P11137 1827 aaKnown RBP18.69■□□□□ 0.58
PCDHGB1-202ENST00000611598 WAPLQ7Z5K2 1190 aa18.69■□□□□ 0.58
PCDHGB1-202ENST00000611598 USP26Q9BXU7 913 aa18.69■□□□□ 0.58
PCDHGB1-202ENST00000611598 API5Q9BZZ5 524 aaKnown RBP18.69■□□□□ 0.58
PCDHGB1-202ENST00000611598 DCTPP1Q9H773 170 aa18.69■□□□□ 0.58
PCDHGB1-202ENST00000611598 CFAP44Q96MT7 982 aa18.69■□□□□ 0.58
PCDHGB1-202ENST00000611598 REREQ9P2R6 1566 aa18.68■□□□□ 0.58
PCDHGB1-202ENST00000611598 DIP2CQ9Y2E4 1556 aa18.68■□□□□ 0.58
PCDHGB1-202ENST00000611598 CAVIN1Q6NZI2 390 aaKnown RBP18.68■□□□□ 0.58
PCDHGB1-202ENST00000611598 IBTKQ9P2D0 1353 aaPredicted RBP18.68■□□□□ 0.58
PCDHGB1-202ENST00000611598 NCLP19338 710 aaKnown RBP18.68■□□□□ 0.58
PCDHGB1-202ENST00000611598 NME9Q86XW9 330 aa18.68■□□□□ 0.58
PCDHGB1-202ENST00000611598 CYP2E1P05181 493 aaPredicted RBP18.67■□□□□ 0.58
PCDHGB1-202ENST00000611598 ALKQ9UM73 1620 aa18.67■□□□□ 0.58
PCDHGB1-202ENST00000611598 APBB1O00213 710 aa18.67■□□□□ 0.58
PCDHGB1-202ENST00000611598 KRT24Q2M2I5 525 aa18.67■□□□□ 0.58
PCDHGB1-202ENST00000611598 FBXO31Q5XUX0 539 aaPredicted RBP18.67■□□□□ 0.58
PCDHGB1-202ENST00000611598 ZGPATQ8N5A5 531 aaKnown RBP18.66■□□□□ 0.58
PCDHGB1-202ENST00000611598 LMBRD1Q9NUN5 540 aa18.66■□□□□ 0.58
PCDHGB1-202ENST00000611598 RIMS2Q9UQ26 1411 aa18.66■□□□□ 0.58
PCDHGB1-202ENST00000611598 SMARCA5O60264 1052 aaPredicted RBP18.66■□□□□ 0.58
PCDHGB1-202ENST00000611598 ZSCAN23Q3MJ62 389 aa18.66■□□□□ 0.58
PCDHGB1-202ENST00000611598 ZSCAN30Q86W11 494 aa18.65■□□□□ 0.58
PCDHGB1-202ENST00000611598 CHAMP1Q96JM3 812 aa18.65■□□□□ 0.58
PCDHGB1-202ENST00000611598 ATP10DQ9P241 1426 aa18.65■□□□□ 0.58
PCDHGB1-202ENST00000611598 DLG5Q8TDM6 1919 aa18.65■□□□□ 0.58
PCDHGB1-202ENST00000611598 SDSP20132 328 aa18.65■□□□□ 0.58
PCDHGB1-202ENST00000611598 ZNF445P59923 1031 aa18.65■□□□□ 0.58
PCDHGB1-202ENST00000611598 RRS1Q15050 365 aaKnown RBP18.65■□□□□ 0.58
PCDHGB1-202ENST00000611598 YEATS2Q9ULM3 1422 aa18.65■□□□□ 0.58
PCDHGB1-202ENST00000611598 NUCB2P80303 420 aa18.64■□□□□ 0.57
PCDHGB1-202ENST00000611598 INTS3Q68E01 1043 aaKnown RBP18.64■□□□□ 0.57
PCDHGB1-202ENST00000611598 KIAA1211Q6ZU35 1233 aa18.64■□□□□ 0.57
PCDHGB1-202ENST00000611598 ANP32BQ92688 251 aaKnown RBP18.64■□□□□ 0.57
PCDHGB1-202ENST00000611598 GLIPR1L2Q4G1C9 344 aa18.63■□□□□ 0.57
PCDHGB1-202ENST00000611598 ANKRD44Q8N8A2 993 aa18.63■□□□□ 0.57
PCDHGB1-202ENST00000611598 PREX1Q8TCU6 1659 aa18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms