RNA–Protein interactions for RNA: ENST00000611138.1

FAM228B-206, Transcript of family with sequence similarity 228 member B, humanhuman

APPRIS ALT2 TSL 2

Gene FAM228B, Length 362 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM228B-206ENST00000611138 NRAPQ86VF7 1730 aa11.78□□□□□ -0.52
FAM228B-206ENST00000611138 PEAK1Q9H792 1746 aa11.78□□□□□ -0.52
FAM228B-206ENST00000611138 COL18A1P39060 1754 aa11.78□□□□□ -0.52
FAM228B-206ENST00000611138 AMER1Q5JTC6 1135 aaPredicted RBP11.78□□□□□ -0.52
FAM228B-206ENST00000611138 LMO7Q8WWI1 1683 aa11.78□□□□□ -0.52
FAM228B-206ENST00000611138 GCP02774 474 aa11.77□□□□□ -0.53
FAM228B-206ENST00000611138 ZC3H6P61129 1189 aaKnown RBP11.77□□□□□ -0.53
FAM228B-206ENST00000611138 MEX3CQ5U5Q3 659 aaKnown RBP11.77□□□□□ -0.53
FAM228B-206ENST00000611138 KIAA0232Q92628 1395 aa11.77□□□□□ -0.53
FAM228B-206ENST00000611138 TNNT2P45379 298 aaPredicted RBP11.76□□□□□ -0.53
FAM228B-206ENST00000611138 MORC1Q86VD1 984 aa11.76□□□□□ -0.53
FAM228B-206ENST00000611138 KCNH5Q8NCM2 988 aa11.76□□□□□ -0.53
FAM228B-206ENST00000611138 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.76□□□□□ -0.53
FAM228B-206ENST00000611138 RGPD2P0DJD1 1756 aa11.75□□□□□ -0.53
FAM228B-206ENST00000611138 FBLN1P23142 703 aa11.75□□□□□ -0.53
FAM228B-206ENST00000611138 C8orf37Q96NL8 207 aa11.75□□□□□ -0.53
FAM228B-206ENST00000611138 NPC1L1Q9UHC9 1359 aa11.75□□□□□ -0.53
FAM228B-206ENST00000611138 CHRNA2Q15822 529 aa11.74□□□□□ -0.53
FAM228B-206ENST00000611138 REM2Q8IYK8 340 aaPredicted RBP11.74□□□□□ -0.53
FAM228B-206ENST00000611138 PRDM11Q9NQV5 511 aa11.74□□□□□ -0.53
FAM228B-206ENST00000611138 CPDO75976 1380 aa11.74□□□□□ -0.53
FAM228B-206ENST00000611138 ABCC6O95255 1503 aa11.73□□□□□ -0.53
FAM228B-206ENST00000611138 FXR2P51116 673 aaKnown RBP eCLIP11.73□□□□□ -0.53
FAM228B-206ENST00000611138 RRS1Q15050 365 aaKnown RBP11.73□□□□□ -0.53
FAM228B-206ENST00000611138 FAM208AQ9UK61 1670 aaKnown RBP11.73□□□□□ -0.53
FAM228B-206ENST00000611138 CAMTA1Q9Y6Y1 1673 aa11.72□□□□□ -0.53
FAM228B-206ENST00000611138 AATKQ6ZMQ8 1374 aa11.71□□□□□ -0.53
FAM228B-206ENST00000611138 PARD3Q8TEW0 1356 aa11.71□□□□□ -0.53
FAM228B-206ENST00000611138 MAP3K19Q56UN5 1328 aa11.71□□□□□ -0.53
FAM228B-206ENST00000611138 FAM83GA6ND36 823 aa11.71□□□□□ -0.53
FAM228B-206ENST00000611138 ARHGEF25Q86VW2 580 aa11.71□□□□□ -0.53
FAM228B-206ENST00000611138 NGLY1Q96IV0 654 aa11.71□□□□□ -0.53
FAM228B-206ENST00000611138 EMILIN1Q9Y6C2 1016 aa11.71□□□□□ -0.53
FAM228B-206ENST00000611138 WNK3Q9BYP7 1800 aa11.71□□□□□ -0.54
FAM228B-206ENST00000611138 SLIT2O94813 1529 aa11.7□□□□□ -0.54
FAM228B-206ENST00000611138 SMG6Q86US8 1419 aaKnown RBP11.7□□□□□ -0.54
FAM228B-206ENST00000611138 AFF2P51816 1311 aa11.7□□□□□ -0.54
FAM228B-206ENST00000611138 PPM1GO15355 546 aaPredicted RBP11.7□□□□□ -0.54
FAM228B-206ENST00000611138 AMPHP49418 695 aa11.7□□□□□ -0.54
FAM228B-206ENST00000611138 COL5A2P05997 1499 aaPredicted RBP11.7□□□□□ -0.54
FAM228B-206ENST00000611138 RTL1A6NKG5 1358 aa11.69□□□□□ -0.54
FAM228B-206ENST00000611138 BTG4Q9NY30 223 aa11.69□□□□□ -0.54
FAM228B-206ENST00000611138 CDK12Q9NYV4 1490 aaPredicted RBP11.69□□□□□ -0.54
FAM228B-206ENST00000611138 FLT4P35916 1363 aa11.68□□□□□ -0.54
FAM228B-206ENST00000611138 POLA2Q14181 598 aa11.68□□□□□ -0.54
FAM228B-206ENST00000611138 POLKQ9UBT6 870 aa11.68□□□□□ -0.54
FAM228B-206ENST00000611138 BCL9LQ86UU0 1499 aa11.68□□□□□ -0.54
FAM228B-206ENST00000611138 BLMP54132 1417 aaPredicted RBP11.68□□□□□ -0.54
FAM228B-206ENST00000611138 SLC4A2P04920 1241 aa11.67□□□□□ -0.54
FAM228B-206ENST00000611138 HOXC9P31274 260 aa11.67□□□□□ -0.54
FAM228B-206ENST00000611138 SAMD1Q6SPF0 538 aaPredicted RBP11.67□□□□□ -0.54
FAM228B-206ENST00000611138 STRN4Q9NRL3 753 aa11.67□□□□□ -0.54
FAM228B-206ENST00000611138 USP21Q9UK80 565 aa11.67□□□□□ -0.54
FAM228B-206ENST00000611138 AXIN2Q9Y2T1 843 aa11.67□□□□□ -0.54
FAM228B-206ENST00000611138 PPP2R1AP30153 589 aa11.66□□□□□ -0.54
FAM228B-206ENST00000611138 RALBP1Q15311 655 aa11.66□□□□□ -0.54
FAM228B-206ENST00000611138 FNBP4Q8N3X1 1017 aaPredicted RBP11.66□□□□□ -0.54
FAM228B-206ENST00000611138 IP6K1Q92551 441 aa11.66□□□□□ -0.54
FAM228B-206ENST00000611138 LTV1Q96GA3 475 aaPredicted RBP11.66□□□□□ -0.54
FAM228B-206ENST00000611138 PRKRIP1Q9H875 184 aaPredicted RBP11.66□□□□□ -0.54
FAM228B-206ENST00000611138 GLI3P10071 1580 aa11.66□□□□□ -0.54
FAM228B-206ENST00000611138 RGPD1P0DJD0 1748 aa11.66□□□□□ -0.54
FAM228B-206ENST00000611138 KIF24Q5T7B8 1368 aa11.66□□□□□ -0.54
FAM228B-206ENST00000611138 ANP32CO43423 234 aa11.65□□□□□ -0.54
FAM228B-206ENST00000611138 MTHFSP49914 203 aa11.65□□□□□ -0.54
FAM228B-206ENST00000611138 EVA1CP58658 441 aa11.65□□□□□ -0.54
FAM228B-206ENST00000611138 HSP90AB2PQ58FF8 381 aa11.65□□□□□ -0.54
FAM228B-206ENST00000611138 ANKRD24Q8TF21 1146 aa11.65□□□□□ -0.54
FAM228B-206ENST00000611138 INSRP06213 1382 aa11.65□□□□□ -0.55
FAM228B-206ENST00000611138 COL3A1P02461 1466 aaPredicted RBP11.64□□□□□ -0.55
FAM228B-206ENST00000611138 MYBBP1AQ9BQG0 1328 aaKnown RBP11.64□□□□□ -0.55
FAM228B-206ENST00000611138 ATRNO75882 1429 aa11.64□□□□□ -0.55
FAM228B-206ENST00000611138 CSB-PGBD3P0DP91 1061 aa11.64□□□□□ -0.55
FAM228B-206ENST00000611138 DIEXFQ68CQ4 756 aaKnown RBP11.64□□□□□ -0.55
FAM228B-206ENST00000611138 UNC5CLQ8IV45 518 aa11.64□□□□□ -0.55
FAM228B-206ENST00000611138 CCDC9Q9Y3X0 531 aaKnown RBP11.64□□□□□ -0.55
FAM228B-206ENST00000611138 PARP4Q9UKK3 1724 aaKnown RBP11.63□□□□□ -0.55
FAM228B-206ENST00000611138 ERBB3P21860 1342 aa11.63□□□□□ -0.55
FAM228B-206ENST00000611138 CRB1P82279 1406 aa11.63□□□□□ -0.55
FAM228B-206ENST00000611138 LARP1Q6PKG0 1096 aaKnown RBP11.63□□□□□ -0.55
FAM228B-206ENST00000611138 WDR17Q8IZU2 1322 aa11.62□□□□□ -0.55
FAM228B-206ENST00000611138 ZNF772Q68DY9 489 aaPredicted RBP11.62□□□□□ -0.55
FAM228B-206ENST00000611138 TOM1L2Q6ZVM7 507 aa11.62□□□□□ -0.55
FAM228B-206ENST00000611138 RGS17Q9UGC6 210 aaPredicted RBP11.62□□□□□ -0.55
FAM228B-206ENST00000611138 BRWD3Q6RI45 1802 aa11.62□□□□□ -0.55
FAM228B-206ENST00000611138 PITPNM1O00562 1244 aa11.61□□□□□ -0.55
FAM228B-206ENST00000611138 EIF4A2Q14240 407 aaKnown RBP11.61□□□□□ -0.55
FAM228B-206ENST00000611138 VPS72Q15906 364 aa11.61□□□□□ -0.55
FAM228B-206ENST00000611138 CFAP53Q96M91 514 aa11.61□□□□□ -0.55
FAM228B-206ENST00000611138 USP35Q9P2H5 1018 aa11.61□□□□□ -0.55
FAM228B-206ENST00000611138 TRPC5Q9UL62 973 aaPredicted RBP11.61□□□□□ -0.55
FAM228B-206ENST00000611138 LRRC37A3O60309 1634 aa11.6□□□□□ -0.55
FAM228B-206ENST00000611138 THSD7AQ9UPZ6 1657 aa11.6□□□□□ -0.55
FAM228B-206ENST00000611138 USHBP1Q8N6Y0 703 aa11.6□□□□□ -0.55
FAM228B-206ENST00000611138 QTRT2Q9H974 415 aaKnown RBP11.6□□□□□ -0.55
FAM228B-206ENST00000611138 NLRP2Q9NX02 1062 aa11.6□□□□□ -0.55
FAM228B-206ENST00000611138 SHANK3Q9BYB0 1731 aa11.6□□□□□ -0.55
FAM228B-206ENST00000611138 SPATA31A5Q5VU36 1347 aa11.6□□□□□ -0.55
FAM228B-206ENST00000611138 SPATA31A7Q8IWB4 1347 aa11.6□□□□□ -0.55
FAM228B-206ENST00000611138 POTEAQ6S8J7 498 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms