RNA–Protein interactions for RNA: ENST00000611127.4

FAM228B-205, Transcript of family with sequence similarity 228 member B, humanhuman

APPRIS P3 TSL 5 BASIC

Gene FAM228B, Length 975 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM228B-205ENST00000611127 TUSC1Q2TAM9 212 aa12.46□□□□□ -0.41
FAM228B-205ENST00000611127 PRR7Q8TB68 274 aa12.46□□□□□ -0.41
FAM228B-205ENST00000611127 TOR4AQ9NXH8 423 aa12.46□□□□□ -0.41
FAM228B-205ENST00000611127 RIC3Q7Z5B4 369 aa12.45□□□□□ -0.42
FAM228B-205ENST00000611127 RSPH6AQ9H0K4 717 aa12.45□□□□□ -0.42
FAM228B-205ENST00000611127 ZBTB3Q9H5J0 574 aa12.45□□□□□ -0.42
FAM228B-205ENST00000611127 ATP1B4Q9UN42 357 aaPredicted RBP12.45□□□□□ -0.42
FAM228B-205ENST00000611127 ARHGAP35Q9NRY4 1499 aa12.45□□□□□ -0.42
FAM228B-205ENST00000611127 PHLDB1Q86UU1 1377 aa12.44□□□□□ -0.42
FAM228B-205ENST00000611127 CFAP43Q8NDM7 1665 aa12.44□□□□□ -0.42
FAM228B-205ENST00000611127 CDK11AQ9UQ88 783 aaPredicted RBP12.43□□□□□ -0.42
FAM228B-205ENST00000611127 MYT1Q01538 1121 aa12.42□□□□□ -0.42
FAM228B-205ENST00000611127 EVA1BQ9NVM1 165 aa12.41□□□□□ -0.42
FAM228B-205ENST00000611127 MYSM1Q5VVJ2 828 aa12.4□□□□□ -0.42
FAM228B-205ENST00000611127 SNIP1Q8TAD8 396 aaKnown RBP12.4□□□□□ -0.42
FAM228B-205ENST00000611127 ABCA9Q8IUA7 1624 aa12.4□□□□□ -0.42
FAM228B-205ENST00000611127 ARAP3Q8WWN8 1544 aa12.39□□□□□ -0.43
FAM228B-205ENST00000611127 TTC24A2A3L6 582 aaPredicted RBP12.39□□□□□ -0.43
FAM228B-205ENST00000611127 AVPP01185 164 aa12.39□□□□□ -0.43
FAM228B-205ENST00000611127 CRIPAKQ8N1N5 446 aa12.39□□□□□ -0.43
FAM228B-205ENST00000611127 PCDHB15Q9Y5E8 787 aa12.39□□□□□ -0.43
FAM228B-205ENST00000611127 NEO1Q92859 1461 aa12.39□□□□□ -0.43
FAM228B-205ENST00000611127 HRCP23327 699 aa12.38□□□□□ -0.43
FAM228B-205ENST00000611127 PRKCSHP14314 528 aaPredicted RBP12.37□□□□□ -0.43
FAM228B-205ENST00000611127 KCNH2Q12809 1159 aa12.37□□□□□ -0.43
FAM228B-205ENST00000611127 CTC1Q2NKJ3 1217 aa12.37□□□□□ -0.43
FAM228B-205ENST00000611127 LYPD8Q6UX82 237 aa12.37□□□□□ -0.43
FAM228B-205ENST00000611127 MRGPRX2Q96LB1 330 aa12.37□□□□□ -0.43
FAM228B-205ENST00000611127 RAPGEF3O95398 923 aa12.36□□□□□ -0.43
FAM228B-205ENST00000611127 RC3H1Q5TC82 1133 aaKnown RBP12.36□□□□□ -0.43
FAM228B-205ENST00000611127 CDK13Q14004 1512 aaKnown RBP12.36□□□□□ -0.43
FAM228B-205ENST00000611127 DDRGK1Q96HY6 314 aa12.35□□□□□ -0.43
FAM228B-205ENST00000611127 HECW1Q76N89 1606 aa12.35□□□□□ -0.43
FAM228B-205ENST00000611127 CLIP1P30622 1438 aa12.35□□□□□ -0.43
FAM228B-205ENST00000611127 CLK2P49760 499 aaKnown RBP12.34□□□□□ -0.43
FAM228B-205ENST00000611127 SKOR1P84550 965 aa12.34□□□□□ -0.43
FAM228B-205ENST00000611127 PTCRAQ6ISU1 281 aaPredicted RBP12.34□□□□□ -0.43
FAM228B-205ENST00000611127 UNC93B1Q9H1C4 597 aa12.34□□□□□ -0.43
FAM228B-205ENST00000611127 CASKIN1Q8WXD9 1431 aa12.34□□□□□ -0.43
FAM228B-205ENST00000611127 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.33□□□□□ -0.44
FAM228B-205ENST00000611127 CFAP99D6REC4 459 aa12.33□□□□□ -0.44
FAM228B-205ENST00000611127 LIMD1Q9UGP4 676 aa12.33□□□□□ -0.44
FAM228B-205ENST00000611127 PLCH2O75038 1416 aa12.32□□□□□ -0.44
FAM228B-205ENST00000611127 AKNAQ7Z591 1439 aa12.32□□□□□ -0.44
FAM228B-205ENST00000611127 NUTM2BA6NNL0 878 aaPredicted RBP12.32□□□□□ -0.44
FAM228B-205ENST00000611127 NUTM2EB1AL46 878 aaPredicted RBP12.32□□□□□ -0.44
FAM228B-205ENST00000611127 LILRB3O75022 631 aa12.32□□□□□ -0.44
FAM228B-205ENST00000611127 SMCPP49901 116 aaPredicted RBP12.32□□□□□ -0.44
FAM228B-205ENST00000611127 NUTM2DQ5VT03 806 aaPredicted RBP12.32□□□□□ -0.44
FAM228B-205ENST00000611127 ZNF787Q6DD87 383 aa12.32□□□□□ -0.44
FAM228B-205ENST00000611127 NUTM2AQ8IVF1 878 aaPredicted RBP12.32□□□□□ -0.44
FAM228B-205ENST00000611127 FANCAO15360 1455 aa12.32□□□□□ -0.44
FAM228B-205ENST00000611127 TROQ12816 1431 aaPredicted RBP12.31□□□□□ -0.44
FAM228B-205ENST00000611127 EFCAB2Q5VUJ9 269 aa12.31□□□□□ -0.44
FAM228B-205ENST00000611127 EHBP1Q8NDI1 1231 aa12.31□□□□□ -0.44
FAM228B-205ENST00000611127 KDM4CQ9H3R0 1056 aa12.31□□□□□ -0.44
FAM228B-205ENST00000611127 AAASQ9NRG9 546 aa12.31□□□□□ -0.44
FAM228B-205ENST00000611127 ADGRL1O94910 1474 aa12.31□□□□□ -0.44
FAM228B-205ENST00000611127 DENND4BO75064 1496 aaPredicted RBP12.3□□□□□ -0.44
FAM228B-205ENST00000611127 SMPD1P17405 629 aa12.3□□□□□ -0.44
FAM228B-205ENST00000611127 CSPP1Q1MSJ5 1256 aa12.3□□□□□ -0.44
FAM228B-205ENST00000611127 HELBQ8NG08 1087 aaPredicted RBP12.3□□□□□ -0.44
FAM228B-205ENST00000611127 CABLES1Q8TDN4 633 aa12.3□□□□□ -0.44
FAM228B-205ENST00000611127 CCDC18Q5T9S5 1454 aa12.29□□□□□ -0.44
FAM228B-205ENST00000611127 AXIN1O15169 862 aa12.29□□□□□ -0.44
FAM228B-205ENST00000611127 CTHP32929 405 aa12.28□□□□□ -0.44
FAM228B-205ENST00000611127 SH3BP2P78314 561 aa12.28□□□□□ -0.44
FAM228B-205ENST00000611127 TTC37Q6PGP7 1564 aa12.27□□□□□ -0.44
FAM228B-205ENST00000611127 F12P00748 615 aaPredicted RBP12.27□□□□□ -0.45
FAM228B-205ENST00000611127 SKIV2LQ15477 1246 aaKnown RBP12.27□□□□□ -0.45
FAM228B-205ENST00000611127 QPCTQ16769 361 aa12.27□□□□□ -0.45
FAM228B-205ENST00000611127 SH3D19Q5HYK7 790 aa12.27□□□□□ -0.45
FAM228B-205ENST00000611127 ZNF511Q8NB15 262 aa12.27□□□□□ -0.45
FAM228B-205ENST00000611127 FYCO1Q9BQS8 1478 aa12.27□□□□□ -0.45
FAM228B-205ENST00000611127 SCAPERQ9BY12 1400 aa12.26□□□□□ -0.45
FAM228B-205ENST00000611127 CFAP74Q9C0B2 1584 aa12.26□□□□□ -0.45
FAM228B-205ENST00000611127 VARSP26640 1264 aaKnown RBP12.25□□□□□ -0.45
FAM228B-205ENST00000611127 MPNDQ8N594 471 aa12.25□□□□□ -0.45
FAM228B-205ENST00000611127 ARMC2Q8NEN0 867 aa12.25□□□□□ -0.45
FAM228B-205ENST00000611127 BAP1Q92560 729 aa12.25□□□□□ -0.45
FAM228B-205ENST00000611127 ST8SIA5O15466 376 aa12.24□□□□□ -0.45
FAM228B-205ENST00000611127 SIAH2O43255 324 aa12.24□□□□□ -0.45
FAM228B-205ENST00000611127 PCF11O94913 1555 aaKnown RBP12.24□□□□□ -0.45
FAM228B-205ENST00000611127 KIF14Q15058 1648 aa12.24□□□□□ -0.45
FAM228B-205ENST00000611127 ARID4BQ4LE39 1312 aaPredicted RBP12.24□□□□□ -0.45
FAM228B-205ENST00000611127 GPBP1L1Q9HC44 474 aaPredicted RBP12.24□□□□□ -0.45
FAM228B-205ENST00000611127 POLR3EQ9NVU0 708 aa12.24□□□□□ -0.45
FAM228B-205ENST00000611127 CEP162Q5TB80 1403 aa12.23□□□□□ -0.45
FAM228B-205ENST00000611127 J3QL48 77 aa12.23□□□□□ -0.45
FAM228B-205ENST00000611127 ALDH1A1P00352 501 aa12.23□□□□□ -0.45
FAM228B-205ENST00000611127 FRMPD1Q5SYB0 1578 aa12.22□□□□□ -0.45
FAM228B-205ENST00000611127 MAGI2Q86UL8 1455 aa12.22□□□□□ -0.45
FAM228B-205ENST00000611127 LOC105371045A0A1W2PR82 267 aa12.22□□□□□ -0.45
FAM228B-205ENST00000611127 PLEKHG3A1L390 1219 aa12.22□□□□□ -0.45
FAM228B-205ENST00000611127 LINC01559Q495D7 138 aa12.22□□□□□ -0.45
FAM228B-205ENST00000611127 TSC1Q92574 1164 aa12.22□□□□□ -0.45
FAM228B-205ENST00000611127 POGZQ7Z3K3 1410 aa12.21□□□□□ -0.45
FAM228B-205ENST00000611127 FAM117AQ9C073 453 aa12.21□□□□□ -0.45
FAM228B-205ENST00000611127 MAP10Q9P2G4 905 aa12.21□□□□□ -0.45
FAM228B-205ENST00000611127 ARHGAP5Q13017 1502 aa12.21□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 520.8 ms