RNA–Protein interactions for RNA: ENST00000610726.4

CSDE1-218, Transcript of cold shock domain containing E1, humanhuman

TSL 5 BASIC

Gene CSDE1, Length 4,312 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-218ENST00000610726 ARHGEF12Q9NZN5 1544 aa8.88□□□□□ -0.99
CSDE1-218ENST00000610726 SRGAP3O43295 1099 aa8.88□□□□□ -0.99
CSDE1-218ENST00000610726 L1TD1Q5T7N2 865 aaKnown RBP8.88□□□□□ -0.99
CSDE1-218ENST00000610726 CADPS2Q86UW7 1296 aa8.88□□□□□ -0.99
CSDE1-218ENST00000610726 IL1RAPL2Q9NP60 686 aa8.88□□□□□ -0.99
CSDE1-218ENST00000610726 ABCC11Q96J66 1382 aa8.88□□□□□ -0.99
CSDE1-218ENST00000610726 NKTRP30414 1462 aaKnown RBP8.88□□□□□ -0.99
CSDE1-218ENST00000610726 TRIM27P14373 513 aa8.88□□□□□ -0.99
CSDE1-218ENST00000610726 BACH2Q9BYV9 841 aa8.88□□□□□ -0.99
CSDE1-218ENST00000610726 YEATS2Q9ULM3 1422 aa8.88□□□□□ -0.99
CSDE1-218ENST00000610726 EXOC6BQ9Y2D4 811 aa8.87□□□□□ -0.99
CSDE1-218ENST00000610726 ASXL1Q8IXJ9 1541 aa8.87□□□□□ -0.99
CSDE1-218ENST00000610726 ATP10AO60312 1499 aa8.87□□□□□ -0.99
CSDE1-218ENST00000610726 CDK11BP21127 795 aaKnown RBP8.87□□□□□ -0.99
CSDE1-218ENST00000610726 LRRFIP1Q32MZ4 808 aaKnown RBP8.87□□□□□ -0.99
CSDE1-218ENST00000610726 CHD1LQ86WJ1 897 aa8.87□□□□□ -0.99
CSDE1-218ENST00000610726 FSD1Q9BTV5 496 aa8.87□□□□□ -0.99
CSDE1-218ENST00000610726 MBIPQ9NS73 344 aa8.87□□□□□ -0.99
CSDE1-218ENST00000610726 UHRF1BP1Q6BDS2 1440 aa8.87□□□□□ -0.99
CSDE1-218ENST00000610726 YTHDC2Q9H6S0 1430 aaKnown RBP8.87□□□□□ -0.99
CSDE1-218ENST00000610726 A0A1W2PP64 1363 aa8.87□□□□□ -0.99
CSDE1-218ENST00000610726 WASHC4Q2M389 1173 aa8.86□□□□□ -0.99
CSDE1-218ENST00000610726 KIF6Q6ZMV9 814 aa8.86□□□□□ -0.99
CSDE1-218ENST00000610726 FAM184AQ8NB25 1140 aa8.86□□□□□ -0.99
CSDE1-218ENST00000610726 DNAJC2Q99543 621 aaKnown RBP8.86□□□□□ -0.99
CSDE1-218ENST00000610726 ERCC6L2Q5T890 1561 aa8.86□□□□□ -0.99
CSDE1-218ENST00000610726 AMOTQ4VCS5 1084 aa8.86□□□□□ -0.99
CSDE1-218ENST00000610726 CCDC85AQ96PX6 553 aaPredicted RBP8.86□□□□□ -0.99
CSDE1-218ENST00000610726 LRRCC1Q9C099 1032 aa8.86□□□□□ -0.99
CSDE1-218ENST00000610726 DDX49Q9Y6V7 483 aaKnown RBP8.86□□□□□ -0.99
CSDE1-218ENST00000610726 NPATQ14207 1427 aa8.86□□□□□ -0.99
CSDE1-218ENST00000610726 EIF4A2Q14240 407 aaKnown RBP8.86□□□□□ -0.99
CSDE1-218ENST00000610726 ALDH1L2Q3SY69 923 aa8.86□□□□□ -0.99
CSDE1-218ENST00000610726 CABLES1Q8TDN4 633 aa8.86□□□□□ -0.99
CSDE1-218ENST00000610726 H3BQV1 296 aa8.85□□□□□ -0.99
CSDE1-218ENST00000610726 HTATSF1O43719 755 aaKnown RBP8.85□□□□□ -0.99
CSDE1-218ENST00000610726 MAP4K4O95819 1239 aaPredicted RBP8.85□□□□□ -0.99
CSDE1-218ENST00000610726 IFFO2Q5TF58 517 aa8.85□□□□□ -0.99
CSDE1-218ENST00000610726 RNF20Q5VTR2 975 aa8.85□□□□□ -0.99
CSDE1-218ENST00000610726 ANKRD24Q8TF21 1146 aa8.85□□□□□ -0.99
CSDE1-218ENST00000610726 TBX22Q9Y458 520 aa8.85□□□□□ -0.99
CSDE1-218ENST00000610726 KDM6BO15054 1643 aa8.85□□□□□ -0.99
CSDE1-218ENST00000610726 ANXA1P04083 346 aa8.85□□□□□ -0.99
CSDE1-218ENST00000610726 DRC7Q8IY82 874 aa8.85□□□□□ -0.99
CSDE1-218ENST00000610726 CNTROBQ8N137 903 aa8.85□□□□□ -0.99
CSDE1-218ENST00000610726 MAST1Q9Y2H9 1570 aa8.85□□□□□ -0.99
CSDE1-218ENST00000610726 PTMSP20962 102 aa8.85□□□□□ -0.99
CSDE1-218ENST00000610726 RPAP2Q8IXW5 612 aaPredicted RBP8.85□□□□□ -0.99
CSDE1-218ENST00000610726 PUS7Q96PZ0 661 aaKnown RBP8.85□□□□□ -0.99
CSDE1-218ENST00000610726 SYAP1Q96A49 352 aaPredicted RBP8.84□□□□□ -0.99
CSDE1-218ENST00000610726 PHACTR3Q96KR7 559 aa8.84□□□□□ -0.99
CSDE1-218ENST00000610726 KIF3AQ9Y496 699 aa8.84□□□□□ -0.99
CSDE1-218ENST00000610726 LRPPRCP42704 1394 aaKnown RBP8.84□□□□□ -0.99
CSDE1-218ENST00000610726 GOLGA6L3A6NEY3 463 aa8.84□□□□□ -0.99
CSDE1-218ENST00000610726 MCTP1Q6DN14 999 aa8.84□□□□□ -0.99
CSDE1-218ENST00000610726 TTC21AQ8NDW8 1320 aa8.84□□□□□ -0.99
CSDE1-218ENST00000610726 SF3A1Q15459 793 aaKnown RBP8.84□□□□□ -0.99
CSDE1-218ENST00000610726 CHMP5Q9NZZ3 219 aa8.84□□□□□ -0.99
CSDE1-218ENST00000610726 NEK4P51957 841 aa8.84□□□□□ -1
CSDE1-218ENST00000610726 LRRC59Q96AG4 307 aaKnown RBP8.84□□□□□ -1
CSDE1-218ENST00000610726 KAT6BQ8WYB5 2073 aa8.83□□□□□ -1
CSDE1-218ENST00000610726 NEO1Q92859 1461 aa8.83□□□□□ -1
CSDE1-218ENST00000610726 COL17A1Q9UMD9 1497 aaPredicted RBP8.83□□□□□ -1
CSDE1-218ENST00000610726 POLR3AO14802 1390 aaPredicted RBP8.83□□□□□ -1
CSDE1-218ENST00000610726 SMARCA5O60264 1052 aaPredicted RBP8.83□□□□□ -1
CSDE1-218ENST00000610726 LTKP29376 864 aa8.83□□□□□ -1
CSDE1-218ENST00000610726 TRDNQ13061 729 aa8.83□□□□□ -1
CSDE1-218ENST00000610726 FBXW7Q969H0 707 aa8.83□□□□□ -1
CSDE1-218ENST00000610726 CNNM1Q9NRU3 951 aa8.83□□□□□ -1
CSDE1-218ENST00000610726 PLEKHH1Q9ULM0 1364 aa8.83□□□□□ -1
CSDE1-218ENST00000610726 FLIIQ13045 1269 aa8.83□□□□□ -1
CSDE1-218ENST00000610726 C19orf44Q9H6X5 657 aa8.83□□□□□ -1
CSDE1-218ENST00000610726 SAMD9LQ8IVG5 1584 aa8.83□□□□□ -1
CSDE1-218ENST00000610726 EIF2AK4Q9P2K8 1649 aaKnown RBP8.82□□□□□ -1
CSDE1-218ENST00000610726 VPS37CA5D8V6 355 aaPredicted RBP8.82□□□□□ -1
CSDE1-218ENST00000610726 DDX11L8A8MPP1 907 aa8.82□□□□□ -1
CSDE1-218ENST00000610726 SPINK5Q9NQ38 1064 aaPredicted RBP8.82□□□□□ -1
CSDE1-218ENST00000610726 TMOD3Q9NYL9 352 aa8.82□□□□□ -1
CSDE1-218ENST00000610726 CHD1O14646 1710 aa8.82□□□□□ -1
CSDE1-218ENST00000610726 CPLX1O14810 134 aa8.82□□□□□ -1
CSDE1-218ENST00000610726 TTC37Q6PGP7 1564 aa8.82□□□□□ -1
CSDE1-218ENST00000610726 ERC1Q8IUD2 1116 aa8.82□□□□□ -1
CSDE1-218ENST00000610726 CCDC27Q2M243 656 aa8.82□□□□□ -1
CSDE1-218ENST00000610726 AACSQ86V21 672 aa8.82□□□□□ -1
CSDE1-218ENST00000610726 NUTM1Q86Y26 1132 aa8.82□□□□□ -1
CSDE1-218ENST00000610726 C8orf58Q8NAV2 365 aa8.82□□□□□ -1
CSDE1-218ENST00000610726 NAP1L5Q96NT1 182 aaPredicted RBP8.82□□□□□ -1
CSDE1-218ENST00000610726 ARHGEF5Q12774 1597 aa8.82□□□□□ -1
CSDE1-218ENST00000610726 FOSBP53539 338 aa8.81□□□□□ -1
CSDE1-218ENST00000610726 KRT24Q2M2I5 525 aa8.81□□□□□ -1
CSDE1-218ENST00000610726 SYNE3Q6ZMZ3 975 aa8.81□□□□□ -1
CSDE1-218ENST00000610726 TNNQ9UQP3 1299 aa8.81□□□□□ -1
CSDE1-218ENST00000610726 MAP3K19Q56UN5 1328 aa8.81□□□□□ -1
CSDE1-218ENST00000610726 GOLGA6L6A8MZA4 724 aa8.81□□□□□ -1
CSDE1-218ENST00000610726 MSNP26038 577 aaKnown RBP8.81□□□□□ -1
CSDE1-218ENST00000610726 CCDC57Q2TAC2 916 aa8.81□□□□□ -1
CSDE1-218ENST00000610726 ORAI2Q96SN7 254 aa8.81□□□□□ -1
CSDE1-218ENST00000610726 ABCC1P33527 1531 aa8.81□□□□□ -1
CSDE1-218ENST00000610726 MSH6P52701 1360 aa8.81□□□□□ -1
CSDE1-218ENST00000610726 CSPP1Q1MSJ5 1256 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms