RNA–Protein interactions for RNA: ENST00000608624.5

LINC00343-212, long intergenic non-protein coding RNA 343, humanhuman

TSL 5

Gene LINC00343, Length 774 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00343-212ENST00000608624 NUTM2AQ8IVF1 878 aaPredicted RBP12.55□□□□□ -0.4
LINC00343-212ENST00000608624 LRRC59Q96AG4 307 aaKnown RBP12.55□□□□□ -0.4
LINC00343-212ENST00000608624 CDCA8Q53HL2 280 aa12.54□□□□□ -0.4
LINC00343-212ENST00000608624 KIF20BQ96Q89 1820 aa12.53□□□□□ -0.4
LINC00343-212ENST00000608624 HDGFL2Q7Z4V5 671 aaPredicted RBP12.53□□□□□ -0.4
LINC00343-212ENST00000608624 TERF2IPQ9NYB0 399 aa12.53□□□□□ -0.4
LINC00343-212ENST00000608624 USP54Q70EL1 1684 aa12.53□□□□□ -0.4
LINC00343-212ENST00000608624 USP19O94966 1318 aa12.53□□□□□ -0.4
LINC00343-212ENST00000608624 ARHGEF10O15013 1369 aa12.53□□□□□ -0.4
LINC00343-212ENST00000608624 PANK3Q9H999 370 aa12.52□□□□□ -0.41
LINC00343-212ENST00000608624 OVOS2A0A0J9YW53 1432 aa12.52□□□□□ -0.41
LINC00343-212ENST00000608624 OVOS2Q6IE36 1432 aa12.52□□□□□ -0.41
LINC00343-212ENST00000608624 SLIT3O75094 1523 aa12.52□□□□□ -0.41
LINC00343-212ENST00000608624 NFAT5O94916 1531 aa12.52□□□□□ -0.41
LINC00343-212ENST00000608624 ATMINO43313 823 aaPredicted RBP12.51□□□□□ -0.41
LINC00343-212ENST00000608624 SLC24A1O60721 1099 aa12.51□□□□□ -0.41
LINC00343-212ENST00000608624 ADAMTS2O95450 1211 aa12.51□□□□□ -0.41
LINC00343-212ENST00000608624 ABTB2Q8N961 1025 aa12.51□□□□□ -0.41
LINC00343-212ENST00000608624 FAM163AQ96GL9 167 aaPredicted RBP12.51□□□□□ -0.41
LINC00343-212ENST00000608624 SOX12O15370 315 aa12.5□□□□□ -0.41
LINC00343-212ENST00000608624 C7P10643 843 aa12.5□□□□□ -0.41
LINC00343-212ENST00000608624 SPATA31A6Q5VVP1 1343 aa12.49□□□□□ -0.41
LINC00343-212ENST00000608624 TTC21AQ8NDW8 1320 aa12.49□□□□□ -0.41
LINC00343-212ENST00000608624 FBLN1P23142 703 aa12.49□□□□□ -0.41
LINC00343-212ENST00000608624 NLRP6P59044 892 aa12.49□□□□□ -0.41
LINC00343-212ENST00000608624 GGNBP2Q9H3C7 697 aa12.49□□□□□ -0.41
LINC00343-212ENST00000608624 PLCH1Q4KWH8 1693 aa12.48□□□□□ -0.41
LINC00343-212ENST00000608624 BRD4O60885 1362 aaPredicted RBP12.48□□□□□ -0.41
LINC00343-212ENST00000608624 USP31Q70CQ4 1352 aa12.48□□□□□ -0.41
LINC00343-212ENST00000608624 FYB1O15117 783 aa12.48□□□□□ -0.41
LINC00343-212ENST00000608624 SLC39A7Q92504 469 aa12.48□□□□□ -0.41
LINC00343-212ENST00000608624 KIAA0232Q92628 1395 aa12.47□□□□□ -0.41
LINC00343-212ENST00000608624 MAMSTRQ6ZN01 415 aa12.47□□□□□ -0.41
LINC00343-212ENST00000608624 MS4A3Q96HJ5 214 aa12.47□□□□□ -0.41
LINC00343-212ENST00000608624 ANKRD26Q9UPS8 1709 aa12.47□□□□□ -0.41
LINC00343-212ENST00000608624 ZC3H6P61129 1189 aaKnown RBP12.46□□□□□ -0.41
LINC00343-212ENST00000608624 CNGB1Q14028 1251 aaPredicted RBP12.46□□□□□ -0.41
LINC00343-212ENST00000608624 CHRNA2Q15822 529 aa12.46□□□□□ -0.41
LINC00343-212ENST00000608624 C8orf37Q96NL8 207 aa12.46□□□□□ -0.41
LINC00343-212ENST00000608624 RGS17Q9UGC6 210 aaPredicted RBP12.46□□□□□ -0.41
LINC00343-212ENST00000608624 PEAK1Q9H792 1746 aa12.45□□□□□ -0.42
LINC00343-212ENST00000608624 LMO7Q8WWI1 1683 aa12.45□□□□□ -0.42
LINC00343-212ENST00000608624 PER1O15534 1290 aaPredicted RBP12.45□□□□□ -0.42
LINC00343-212ENST00000608624 GCP02774 474 aa12.45□□□□□ -0.42
LINC00343-212ENST00000608624 MNX1P50219 401 aaPredicted RBP12.45□□□□□ -0.42
LINC00343-212ENST00000608624 AMER1Q5JTC6 1135 aaPredicted RBP12.45□□□□□ -0.42
LINC00343-212ENST00000608624 LTN1O94822 1766 aa12.45□□□□□ -0.42
LINC00343-212ENST00000608624 COL18A1P39060 1754 aa12.45□□□□□ -0.42
LINC00343-212ENST00000608624 NRAPQ86VF7 1730 aa12.45□□□□□ -0.42
LINC00343-212ENST00000608624 ZBTB7CA1YPR0 619 aa12.44□□□□□ -0.42
LINC00343-212ENST00000608624 FAM83GA6ND36 823 aa12.44□□□□□ -0.42
LINC00343-212ENST00000608624 HAP1P54257 671 aaPredicted RBP12.44□□□□□ -0.42
LINC00343-212ENST00000608624 MEX3CQ5U5Q3 659 aaKnown RBP12.44□□□□□ -0.42
LINC00343-212ENST00000608624 NLRP13Q86W25 1043 aa12.44□□□□□ -0.42
LINC00343-212ENST00000608624 COL14A1Q05707 1796 aaKnown RBP12.43□□□□□ -0.42
LINC00343-212ENST00000608624 RGPD5Q99666 1765 aa12.43□□□□□ -0.42
LINC00343-212ENST00000608624 AFF2P51816 1311 aa12.43□□□□□ -0.42
LINC00343-212ENST00000608624 SLIT2O94813 1529 aa12.43□□□□□ -0.42
LINC00343-212ENST00000608624 DDX10Q13206 875 aaKnown RBP12.43□□□□□ -0.42
LINC00343-212ENST00000608624 CGNL1Q0VF96 1302 aa12.42□□□□□ -0.42
LINC00343-212ENST00000608624 CAMTA1Q9Y6Y1 1673 aa12.42□□□□□ -0.42
LINC00343-212ENST00000608624 BCL9LQ86UU0 1499 aa12.42□□□□□ -0.42
LINC00343-212ENST00000608624 ZNF316A6NFI3 1004 aaPredicted RBP12.42□□□□□ -0.42
LINC00343-212ENST00000608624 CPDO75976 1380 aa12.42□□□□□ -0.42
LINC00343-212ENST00000608624 TNNT2P45379 298 aaPredicted RBP12.41□□□□□ -0.42
LINC00343-212ENST00000608624 RRS1Q15050 365 aaKnown RBP12.41□□□□□ -0.42
LINC00343-212ENST00000608624 CC2D1BQ5T0F9 858 aaKnown RBP12.41□□□□□ -0.42
LINC00343-212ENST00000608624 COG3Q96JB2 828 aa12.41□□□□□ -0.42
LINC00343-212ENST00000608624 PRDM11Q9NQV5 511 aa12.41□□□□□ -0.42
LINC00343-212ENST00000608624 NGLY1Q96IV0 654 aa12.4□□□□□ -0.42
LINC00343-212ENST00000608624 AXIN2Q9Y2T1 843 aa12.4□□□□□ -0.42
LINC00343-212ENST00000608624 KNSTRNQ9Y448 316 aa12.4□□□□□ -0.42
LINC00343-212ENST00000608624 NWD2Q9ULI1 1742 aa12.4□□□□□ -0.43
LINC00343-212ENST00000608624 MAP3K19Q56UN5 1328 aa12.39□□□□□ -0.43
LINC00343-212ENST00000608624 POTEAQ6S8J7 498 aa12.39□□□□□ -0.43
LINC00343-212ENST00000608624 ARHGEF25Q86VW2 580 aa12.39□□□□□ -0.43
LINC00343-212ENST00000608624 EMILIN1Q9Y6C2 1016 aa12.39□□□□□ -0.43
LINC00343-212ENST00000608624 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.39□□□□□ -0.43
LINC00343-212ENST00000608624 FNBP4Q8N3X1 1017 aaPredicted RBP12.38□□□□□ -0.43
LINC00343-212ENST00000608624 BTG4Q9NY30 223 aa12.38□□□□□ -0.43
LINC00343-212ENST00000608624 COL5A2P05997 1499 aaPredicted RBP12.38□□□□□ -0.43
LINC00343-212ENST00000608624 ATRNO75882 1429 aa12.37□□□□□ -0.43
LINC00343-212ENST00000608624 MAP2P11137 1827 aaKnown RBP12.37□□□□□ -0.43
LINC00343-212ENST00000608624 POTEFA5A3E0 1075 aa12.37□□□□□ -0.43
LINC00343-212ENST00000608624 NSD2O96028 1365 aa12.37□□□□□ -0.43
LINC00343-212ENST00000608624 AATKQ6ZMQ8 1374 aa12.37□□□□□ -0.43
LINC00343-212ENST00000608624 GLI3P10071 1580 aa12.37□□□□□ -0.43
LINC00343-212ENST00000608624 RGPD2P0DJD1 1756 aa12.36□□□□□ -0.43
LINC00343-212ENST00000608624 KCNH5Q8NCM2 988 aa12.36□□□□□ -0.43
LINC00343-212ENST00000608624 SCUBE2Q9NQ36 999 aa12.36□□□□□ -0.43
LINC00343-212ENST00000608624 USP21Q9UK80 565 aa12.36□□□□□ -0.43
LINC00343-212ENST00000608624 NPC1L1Q9UHC9 1359 aa12.35□□□□□ -0.43
LINC00343-212ENST00000608624 ATN1P54259 1190 aaPredicted RBP12.35□□□□□ -0.43
LINC00343-212ENST00000608624 MORC1Q86VD1 984 aa12.35□□□□□ -0.43
LINC00343-212ENST00000608624 STRN4Q9NRL3 753 aa12.35□□□□□ -0.43
LINC00343-212ENST00000608624 SMG6Q86US8 1419 aaKnown RBP12.35□□□□□ -0.43
LINC00343-212ENST00000608624 ABCC6O95255 1503 aa12.34□□□□□ -0.43
LINC00343-212ENST00000608624 HOXC9P31274 260 aa12.34□□□□□ -0.43
LINC00343-212ENST00000608624 LARP1Q6PKG0 1096 aaKnown RBP12.34□□□□□ -0.43
LINC00343-212ENST00000608624 UNC5CLQ8IV45 518 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms