RNA–Protein interactions for RNA: ENST00000603679.1

VCAM1-205, Transcript of vascular cell adhesion molecule 1, humanhuman

Gene VCAM1, Length 3,865 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAM1-205ENST00000603679 AFF2P51816 1311 aa4.47□□□□□ -1.69
VCAM1-205ENST00000603679 NSD2O96028 1365 aa4.47□□□□□ -1.69
VCAM1-205ENST00000603679 TIAM2Q8IVF5 1701 aa4.47□□□□□ -1.69
VCAM1-205ENST00000603679 NGLY1Q96IV0 654 aa4.46□□□□□ -1.69
VCAM1-205ENST00000603679 GPRASP1Q5JY77 1395 aa4.46□□□□□ -1.7
VCAM1-205ENST00000603679 YTHDC2Q9H6S0 1430 aaKnown RBP4.46□□□□□ -1.7
VCAM1-205ENST00000603679 ZBTB7CA1YPR0 619 aa4.46□□□□□ -1.7
VCAM1-205ENST00000603679 RIOK3O14730 519 aaKnown RBP4.45□□□□□ -1.7
VCAM1-205ENST00000603679 ZC3H15Q8WU90 426 aaKnown RBP4.45□□□□□ -1.7
VCAM1-205ENST00000603679 WDR70Q9NW82 654 aa4.45□□□□□ -1.7
VCAM1-205ENST00000603679 COL5A2P05997 1499 aaPredicted RBP4.45□□□□□ -1.7
VCAM1-205ENST00000603679 SBNO2Q9Y2G9 1366 aa4.45□□□□□ -1.7
VCAM1-205ENST00000603679 RNF39Q9H2S5 420 aa4.44□□□□□ -1.7
VCAM1-205ENST00000603679 THRAP3Q9Y2W1 955 aaKnown RBP4.44□□□□□ -1.7
VCAM1-205ENST00000603679 N4BP2Q86UW6 1770 aaPredicted RBP4.44□□□□□ -1.7
VCAM1-205ENST00000603679 TJP1Q07157 1748 aa4.44□□□□□ -1.7
VCAM1-205ENST00000603679 C1QBPQ07021 282 aaKnown RBP4.44□□□□□ -1.7
VCAM1-205ENST00000603679 ZNF646O15015 1829 aaPredicted RBP4.44□□□□□ -1.7
VCAM1-205ENST00000603679 AFDNP55196 1824 aaKnown RBP4.44□□□□□ -1.7
VCAM1-205ENST00000603679 SCN7AQ01118 1682 aa4.44□□□□□ -1.7
VCAM1-205ENST00000603679 TSPY4P0CV99 314 aa4.44□□□□□ -1.7
VCAM1-205ENST00000603679 TSPY10P0CW01 314 aa4.44□□□□□ -1.7
VCAM1-205ENST00000603679 NUP155O75694 1391 aa4.43□□□□□ -1.7
VCAM1-205ENST00000603679 VGFO15240 615 aaPredicted RBP4.43□□□□□ -1.7
VCAM1-205ENST00000603679 OVOS2A0A0J9YW53 1432 aa4.43□□□□□ -1.7
VCAM1-205ENST00000603679 KDM6AO15550 1401 aaPredicted RBP4.43□□□□□ -1.7
VCAM1-205ENST00000603679 OVOS2Q6IE36 1432 aa4.43□□□□□ -1.7
VCAM1-205ENST00000603679 SPATA31A5Q5VU36 1347 aa4.43□□□□□ -1.7
VCAM1-205ENST00000603679 NPHP3Q7Z494 1330 aa4.43□□□□□ -1.7
VCAM1-205ENST00000603679 SPATA31A7Q8IWB4 1347 aa4.43□□□□□ -1.7
VCAM1-205ENST00000603679 MLECQ14165 292 aa4.43□□□□□ -1.7
VCAM1-205ENST00000603679 TNS2Q63HR2 1409 aa4.43□□□□□ -1.7
VCAM1-205ENST00000603679 KIAA0232Q92628 1395 aa4.43□□□□□ -1.7
VCAM1-205ENST00000603679 IFFO2Q5TF58 517 aa4.43□□□□□ -1.7
VCAM1-205ENST00000603679 CAMKK2Q96RR4 588 aa4.43□□□□□ -1.7
VCAM1-205ENST00000603679 USP31Q70CQ4 1352 aa4.42□□□□□ -1.7
VCAM1-205ENST00000603679 UNC5CLQ8IV45 518 aa4.42□□□□□ -1.7
VCAM1-205ENST00000603679 GJD4Q96KN9 370 aaPredicted RBP4.42□□□□□ -1.7
VCAM1-205ENST00000603679 FER1L6Q2WGJ9 1857 aa4.42□□□□□ -1.7
VCAM1-205ENST00000603679 ARHGEF1Q92888 912 aaKnown RBP4.42□□□□□ -1.7
VCAM1-205ENST00000603679 INSRP06213 1382 aa4.41□□□□□ -1.7
VCAM1-205ENST00000603679 SCN11AQ9UI33 1791 aa4.41□□□□□ -1.7
VCAM1-205ENST00000603679 PPP1R15AO75807 674 aaPredicted RBP4.41□□□□□ -1.7
VCAM1-205ENST00000603679 PDIA4P13667 645 aaKnown RBP4.41□□□□□ -1.7
VCAM1-205ENST00000603679 DDX60Q8IY21 1712 aaKnown RBP4.41□□□□□ -1.7
VCAM1-205ENST00000603679 SCN4AP35499 1836 aa4.41□□□□□ -1.7
VCAM1-205ENST00000603679 NSD3Q9BZ95 1437 aa4.41□□□□□ -1.7
VCAM1-205ENST00000603679 PSME4Q14997 1843 aa4.41□□□□□ -1.7
VCAM1-205ENST00000603679 PLSCR1O15162 318 aa4.41□□□□□ -1.7
VCAM1-205ENST00000603679 CD163L1Q9NR16 1453 aa4.41□□□□□ -1.7
VCAM1-205ENST00000603679 OVOS2A0A0G2JMS6 1433 aa4.4□□□□□ -1.7
VCAM1-205ENST00000603679 CPSF1Q10570 1443 aaKnown RBP4.4□□□□□ -1.7
VCAM1-205ENST00000603679 CHRM1P11229 460 aaPredicted RBP4.4□□□□□ -1.7
VCAM1-205ENST00000603679 GGT6Q6P531 493 aa4.4□□□□□ -1.7
VCAM1-205ENST00000603679 KCNV2Q8TDN2 545 aa4.4□□□□□ -1.7
VCAM1-205ENST00000603679 RNF25Q96BH1 459 aaPredicted RBP4.4□□□□□ -1.7
VCAM1-205ENST00000603679 POLR3GLQ9BT43 218 aa4.4□□□□□ -1.7
VCAM1-205ENST00000603679 SLC24A3Q9HC58 644 aa4.4□□□□□ -1.7
VCAM1-205ENST00000603679 RGPD2P0DJD1 1756 aa4.4□□□□□ -1.7
VCAM1-205ENST00000603679 ZRANB1Q9UGI0 708 aa4.4□□□□□ -1.71
VCAM1-205ENST00000603679 SMG6Q86US8 1419 aaKnown RBP4.4□□□□□ -1.71
VCAM1-205ENST00000603679 KDM3BQ7LBC6 1761 aa4.4□□□□□ -1.71
VCAM1-205ENST00000603679 POLA2Q14181 598 aa4.4□□□□□ -1.71
VCAM1-205ENST00000603679 PROSER2Q86WR7 435 aaPredicted RBP4.4□□□□□ -1.71
VCAM1-205ENST00000603679 LRRC37AA6NMS7 1700 aa4.39□□□□□ -1.71
VCAM1-205ENST00000603679 LTBP1Q14766 1721 aa4.39□□□□□ -1.71
VCAM1-205ENST00000603679 ZMYND10O75800 440 aa4.39□□□□□ -1.71
VCAM1-205ENST00000603679 CACNB1Q02641 598 aaPredicted RBP4.39□□□□□ -1.71
VCAM1-205ENST00000603679 SMYD5Q6GMV2 418 aa4.39□□□□□ -1.71
VCAM1-205ENST00000603679 PUS7Q96PZ0 661 aaKnown RBP4.39□□□□□ -1.71
VCAM1-205ENST00000603679 MRC1P22897 1456 aa4.39□□□□□ -1.71
VCAM1-205ENST00000603679 AMOTL2Q9Y2J4 779 aa4.38□□□□□ -1.71
VCAM1-205ENST00000603679 LAMB2P55268 1798 aa4.38□□□□□ -1.71
VCAM1-205ENST00000603679 STK25O00506 426 aa4.38□□□□□ -1.71
VCAM1-205ENST00000603679 PCDH10Q9P2E7 1040 aa4.38□□□□□ -1.71
VCAM1-205ENST00000603679 SPATA31A1Q5TZJ5 1347 aa4.38□□□□□ -1.71
VCAM1-205ENST00000603679 KIF24Q5T7B8 1368 aa4.38□□□□□ -1.71
VCAM1-205ENST00000603679 CRB1P82279 1406 aa4.38□□□□□ -1.71
VCAM1-205ENST00000603679 LAMB4A4D0S4 1761 aa4.38□□□□□ -1.71
VCAM1-205ENST00000603679 ZNF692Q9BU19 519 aaPredicted RBP4.38□□□□□ -1.71
VCAM1-205ENST00000603679 SSUH2Q9Y2M2 353 aa4.38□□□□□ -1.71
VCAM1-205ENST00000603679 TESPA1A2RU30 521 aaPredicted RBP4.37□□□□□ -1.71
VCAM1-205ENST00000603679 SPDYE2BA6NHP3 402 aa4.37□□□□□ -1.71
VCAM1-205ENST00000603679 SPDYE6P0CI01 402 aa4.37□□□□□ -1.71
VCAM1-205ENST00000603679 SPDYE2Q495Y8 402 aa4.37□□□□□ -1.71
VCAM1-205ENST00000603679 C14orf93Q9H972 538 aaKnown RBP4.37□□□□□ -1.71
VCAM1-205ENST00000603679 QTRT2Q9H974 415 aaKnown RBP4.37□□□□□ -1.71
VCAM1-205ENST00000603679 ZC3H4Q9UPT8 1303 aaKnown RBP4.37□□□□□ -1.71
VCAM1-205ENST00000603679 SSC5DA1L4H1 1573 aa4.37□□□□□ -1.71
VCAM1-205ENST00000603679 HMGB2P26583 209 aaKnown RBP4.36□□□□□ -1.71
VCAM1-205ENST00000603679 AK7Q96M32 723 aa4.36□□□□□ -1.71
VCAM1-205ENST00000603679 PAPPA2Q9BXP8 1791 aa4.36□□□□□ -1.71
VCAM1-205ENST00000603679 SLC34A2O95436 690 aa4.36□□□□□ -1.71
VCAM1-205ENST00000603679 FLIIQ13045 1269 aa4.36□□□□□ -1.71
VCAM1-205ENST00000603679 TRPM7Q96QT4 1865 aa4.36□□□□□ -1.71
VCAM1-205ENST00000603679 ATF3P18847 181 aa4.35□□□□□ -1.71
VCAM1-205ENST00000603679 KCTD17Q8N5Z5 321 aa4.35□□□□□ -1.71
VCAM1-205ENST00000603679 PLEKHG3A1L390 1219 aa4.35□□□□□ -1.71
VCAM1-205ENST00000603679 PIP4K2BP78356 416 aa4.35□□□□□ -1.71
VCAM1-205ENST00000603679 ANKRD31Q8N7Z5 1873 aa4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms