RNA–Protein interactions for RNA: ENST00000602888.5

UBE2E3-212, Transcript of ubiquitin conjugating enzyme E2 E3, humanhuman

TSL 2

Gene UBE2E3, Length 499 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E3-212ENST00000602888 ARID3CA6NKF2 412 aa9.61□□□□□ -0.87
UBE2E3-212ENST00000602888 ALDH1A1P00352 501 aa9.61□□□□□ -0.87
UBE2E3-212ENST00000602888 PDZRN3Q9UPQ7 1066 aa9.61□□□□□ -0.87
UBE2E3-212ENST00000602888 SUPT5HO00267 1087 aaKnown RBP9.6□□□□□ -0.87
UBE2E3-212ENST00000602888 ADH1CP00326 375 aa9.6□□□□□ -0.87
UBE2E3-212ENST00000602888 KCTD15Q96SI1 283 aaPredicted RBP9.6□□□□□ -0.87
UBE2E3-212ENST00000602888 CEP126Q9P2H0 1117 aa9.6□□□□□ -0.87
UBE2E3-212ENST00000602888 FSHRP23945 695 aa9.59□□□□□ -0.87
UBE2E3-212ENST00000602888 TOR4AQ9NXH8 423 aa9.59□□□□□ -0.87
UBE2E3-212ENST00000602888 ESPNB1AK53 854 aa9.58□□□□□ -0.88
UBE2E3-212ENST00000602888 GRM5P41594 1212 aa9.58□□□□□ -0.88
UBE2E3-212ENST00000602888 WASF2Q9Y6W5 498 aa9.58□□□□□ -0.88
UBE2E3-212ENST00000602888 GIGYF1O75420 1035 aaPredicted RBP9.57□□□□□ -0.88
UBE2E3-212ENST00000602888 NR5A1Q13285 461 aa9.57□□□□□ -0.88
UBE2E3-212ENST00000602888 SLFNL1Q499Z3 407 aa9.57□□□□□ -0.88
UBE2E3-212ENST00000602888 SEPT12Q8IYM1 358 aa9.57□□□□□ -0.88
UBE2E3-212ENST00000602888 J3QL48 77 aa9.56□□□□□ -0.88
UBE2E3-212ENST00000602888 INTS6LQ5JSJ4 861 aaKnown RBP9.56□□□□□ -0.88
UBE2E3-212ENST00000602888 RNF20Q5VTR2 975 aa9.56□□□□□ -0.88
UBE2E3-212ENST00000602888 RNF135Q8IUD6 432 aa9.56□□□□□ -0.88
UBE2E3-212ENST00000602888 SMPD1P17405 629 aa9.55□□□□□ -0.88
UBE2E3-212ENST00000602888 RAB15P59190 212 aa9.55□□□□□ -0.88
UBE2E3-212ENST00000602888 C1orf115Q9H7X2 142 aa9.55□□□□□ -0.88
UBE2E3-212ENST00000602888 NNTQ13423 1086 aa9.54□□□□□ -0.88
UBE2E3-212ENST00000602888 CCDC125Q86Z20 511 aa9.54□□□□□ -0.88
UBE2E3-212ENST00000602888 UCN2Q96RP3 112 aa9.54□□□□□ -0.88
UBE2E3-212ENST00000602888 PIK3CDO00329 1044 aa9.53□□□□□ -0.88
UBE2E3-212ENST00000602888 GFRA3O60609 400 aa9.53□□□□□ -0.88
UBE2E3-212ENST00000602888 NR3C2P08235 984 aa9.53□□□□□ -0.88
UBE2E3-212ENST00000602888 DHX9Q08211 1270 aaKnown RBP9.53□□□□□ -0.88
UBE2E3-212ENST00000602888 CCDC116Q8IYX3 515 aa9.53□□□□□ -0.88
UBE2E3-212ENST00000602888 PHTF2Q8N3S3 785 aa9.53□□□□□ -0.88
UBE2E3-212ENST00000602888 NFATC2IPQ8NCF5 419 aa9.53□□□□□ -0.88
UBE2E3-212ENST00000602888 CCDC97Q96F63 343 aaPredicted RBP9.53□□□□□ -0.88
UBE2E3-212ENST00000602888 NRG2O14511 850 aaPredicted RBP9.52□□□□□ -0.89
UBE2E3-212ENST00000602888 FAM187AA6NFU0 413 aa9.51□□□□□ -0.89
UBE2E3-212ENST00000602888 LAPTM4AQ15012 233 aa9.51□□□□□ -0.89
UBE2E3-212ENST00000602888 CCDC82Q8N4S0 544 aa9.51□□□□□ -0.89
UBE2E3-212ENST00000602888 CCDC85AQ96PX6 553 aaPredicted RBP9.51□□□□□ -0.89
UBE2E3-212ENST00000602888 SERPINA10Q9UK55 444 aa9.51□□□□□ -0.89
UBE2E3-212ENST00000602888 ERVH48-1M5A8F1 160 aa9.5□□□□□ -0.89
UBE2E3-212ENST00000602888 SKIP12755 728 aa9.5□□□□□ -0.89
UBE2E3-212ENST00000602888 PPP1R26Q5T8A7 1209 aaPredicted RBP9.5□□□□□ -0.89
UBE2E3-212ENST00000602888 PLPP7Q8NBV4 271 aa9.5□□□□□ -0.89
UBE2E3-212ENST00000602888 CHIC2Q9UKJ5 165 aa9.5□□□□□ -0.89
UBE2E3-212ENST00000602888 DOLKQ9UPQ8 538 aa9.5□□□□□ -0.89
UBE2E3-212ENST00000602888 PCDHB11Q9Y5F2 797 aa9.5□□□□□ -0.89
UBE2E3-212ENST00000602888 EMILIN1Q9Y6C2 1016 aa9.5□□□□□ -0.89
UBE2E3-212ENST00000602888 ATP9BO43861 1147 aa9.49□□□□□ -0.89
UBE2E3-212ENST00000602888 MAP7D1Q3KQU3 841 aa9.49□□□□□ -0.89
UBE2E3-212ENST00000602888 TBC1D9Q6ZT07 1266 aa9.49□□□□□ -0.89
UBE2E3-212ENST00000602888 HPS1Q92902 700 aa9.49□□□□□ -0.89
UBE2E3-212ENST00000602888 TRIM52Q96A61 297 aa9.49□□□□□ -0.89
UBE2E3-212ENST00000602888 IRX2Q9BZI1 471 aaPredicted RBP9.49□□□□□ -0.89
UBE2E3-212ENST00000602888 PPP1R12CQ9BZL4 782 aa9.49□□□□□ -0.89
UBE2E3-212ENST00000602888 PGPEP1Q9NXJ5 209 aa9.49□□□□□ -0.89
UBE2E3-212ENST00000602888 PALM3A6NDB9 673 aaPredicted RBP9.48□□□□□ -0.89
UBE2E3-212ENST00000602888 TFIP11Q9UBB9 837 aaKnown RBP9.48□□□□□ -0.89
UBE2E3-212ENST00000602888 USP17L5A8MUK1 530 aa9.47□□□□□ -0.89
UBE2E3-212ENST00000602888 PKDCCQ504Y2 493 aa9.47□□□□□ -0.89
UBE2E3-212ENST00000602888 TMPRSS4Q9NRS4 437 aa9.47□□□□□ -0.89
UBE2E3-212ENST00000602888 MAFBQ9Y5Q3 323 aaPredicted RBP9.47□□□□□ -0.89
UBE2E3-212ENST00000602888 DGAT1O75907 488 aa9.46□□□□□ -0.9
UBE2E3-212ENST00000602888 WDR4P57081 412 aaKnown RBP9.46□□□□□ -0.9
UBE2E3-212ENST00000602888 TSGA10IPQ3SY00 556 aa9.46□□□□□ -0.9
UBE2E3-212ENST00000602888 OXLD1Q5BKU9 147 aa9.46□□□□□ -0.9
UBE2E3-212ENST00000602888 TRAF7Q6Q0C0 670 aa9.46□□□□□ -0.9
UBE2E3-212ENST00000602888 ZNF784Q8NCA9 323 aaPredicted RBP9.46□□□□□ -0.9
UBE2E3-212ENST00000602888 USP17L3A6NCW0 530 aa9.45□□□□□ -0.9
UBE2E3-212ENST00000602888 USP17L4A6NCW7 530 aa9.45□□□□□ -0.9
UBE2E3-212ENST00000602888 LZTS3O60299 673 aaPredicted RBP9.45□□□□□ -0.9
UBE2E3-212ENST00000602888 ZIC2O95409 532 aaPredicted RBP9.45□□□□□ -0.9
UBE2E3-212ENST00000602888 TIMP2P16035 220 aa9.45□□□□□ -0.9
UBE2E3-212ENST00000602888 MYT1Q01538 1121 aa9.45□□□□□ -0.9
UBE2E3-212ENST00000602888 USP17L2Q6R6M4 530 aa9.45□□□□□ -0.9
UBE2E3-212ENST00000602888 USP17L1Q7RTZ2 530 aa9.45□□□□□ -0.9
UBE2E3-212ENST00000602888 PLEKHM2Q8IWE5 1019 aa9.45□□□□□ -0.9
UBE2E3-212ENST00000602888 ITPKCQ96DU7 683 aa9.45□□□□□ -0.9
UBE2E3-212ENST00000602888 CDCA7Q9BWT1 371 aaPredicted RBP9.45□□□□□ -0.9
UBE2E3-212ENST00000602888 KLF16Q9BXK1 252 aaPredicted RBP9.45□□□□□ -0.9
UBE2E3-212ENST00000602888 CYLDQ9NQC7 956 aa9.45□□□□□ -0.9
UBE2E3-212ENST00000602888 ERVK-9P63128 1117 aa9.44□□□□□ -0.9
UBE2E3-212ENST00000602888 NCOA4Q13772 614 aa9.44□□□□□ -0.9
UBE2E3-212ENST00000602888 EML3Q32P44 896 aa9.44□□□□□ -0.9
UBE2E3-212ENST00000602888 CFAP70Q5T0N1 1121 aa9.44□□□□□ -0.9
UBE2E3-212ENST00000602888 DEPDC4Q8N2C3 294 aa9.44□□□□□ -0.9
UBE2E3-212ENST00000602888 MYCP01106 439 aaPredicted RBP9.43□□□□□ -0.9
UBE2E3-212ENST00000602888 AVPP01185 164 aa9.43□□□□□ -0.9
UBE2E3-212ENST00000602888 LMOD1P29536 600 aaPredicted RBP9.43□□□□□ -0.9
UBE2E3-212ENST00000602888 CC2D2BQ6DHV5 1058 aa9.43□□□□□ -0.9
UBE2E3-212ENST00000602888 SIRT1Q96EB6 747 aa9.43□□□□□ -0.9
UBE2E3-212ENST00000602888 ARID3AQ99856 593 aa9.43□□□□□ -0.9
UBE2E3-212ENST00000602888 ESF1Q9H501 851 aaKnown RBP9.43□□□□□ -0.9
UBE2E3-212ENST00000602888 ZFAND3Q9H8U3 227 aa9.43□□□□□ -0.9
UBE2E3-212ENST00000602888 SCTRP47872 440 aa9.42□□□□□ -0.9
UBE2E3-212ENST00000602888 USP4Q13107 963 aa9.42□□□□□ -0.9
UBE2E3-212ENST00000602888 LILRA1O75019 489 aa9.41□□□□□ -0.9
UBE2E3-212ENST00000602888 CAPN5O15484 640 aaPredicted RBP9.4□□□□□ -0.9
UBE2E3-212ENST00000602888 RFX1P22670 979 aa9.4□□□□□ -0.9
UBE2E3-212ENST00000602888 CTC1Q2NKJ3 1217 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms