RNA–Protein interactions for RNA: ENST00000602655.5

PPFIA3-206, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 1 (best)

Gene PPFIA3, Length 3,493 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-206ENST00000602655 CHMP4BQ9H444 224 aaKnown RBP19.18■□□□□ 0.66
PPFIA3-206ENST00000602655 KDM5AP29375 1690 aaKnown RBP19.18■□□□□ 0.66
PPFIA3-206ENST00000602655 SLFN5Q08AF3 891 aa19.17■□□□□ 0.66
PPFIA3-206ENST00000602655 NECTIN2Q92692 538 aa19.17■□□□□ 0.66
PPFIA3-206ENST00000602655 ZNF428Q96B54 188 aa19.17■□□□□ 0.66
PPFIA3-206ENST00000602655 SBNO2Q9Y2G9 1366 aa19.16■□□□□ 0.66
PPFIA3-206ENST00000602655 TBC1D2Q9BYX2 928 aa19.16■□□□□ 0.66
PPFIA3-206ENST00000602655 TTC21BQ7Z4L5 1316 aa19.16■□□□□ 0.66
PPFIA3-206ENST00000602655 AGLP35573 1532 aa19.16■□□□□ 0.66
PPFIA3-206ENST00000602655 EXOSC9Q06265 439 aaKnown RBP19.16■□□□□ 0.66
PPFIA3-206ENST00000602655 TBX22Q9Y458 520 aa19.16■□□□□ 0.66
PPFIA3-206ENST00000602655 QRICH2Q9H0J4 1663 aa19.15■□□□□ 0.66
PPFIA3-206ENST00000602655 MAP7D2Q96T17 732 aa19.15■□□□□ 0.66
PPFIA3-206ENST00000602655 TMPOP42166 694 aaKnown RBP19.15■□□□□ 0.66
PPFIA3-206ENST00000602655 ZC3H6P61129 1189 aaKnown RBP19.15■□□□□ 0.66
PPFIA3-206ENST00000602655 PDZRN4Q6ZMN7 1036 aaPredicted RBP19.15■□□□□ 0.66
PPFIA3-206ENST00000602655 CABLES1Q8TDN4 633 aa19.14■□□□□ 0.65
PPFIA3-206ENST00000602655 KDM2BQ8NHM5 1336 aa19.14■□□□□ 0.65
PPFIA3-206ENST00000602655 MCM10Q7L590 875 aa19.13■□□□□ 0.65
PPFIA3-206ENST00000602655 UQCRHLA0A096LP55 91 aa19.13■□□□□ 0.65
PPFIA3-206ENST00000602655 E9PSI1 815 aa19.13■□□□□ 0.65
PPFIA3-206ENST00000602655 UQCRHP07919 91 aa19.13■□□□□ 0.65
PPFIA3-206ENST00000602655 ZFYVE9O95405 1425 aa19.13■□□□□ 0.65
PPFIA3-206ENST00000602655 PTPRUQ92729 1446 aa19.13■□□□□ 0.65
PPFIA3-206ENST00000602655 NCLP19338 710 aaKnown RBP19.12■□□□□ 0.65
PPFIA3-206ENST00000602655 CHMP5Q9NZZ3 219 aa19.12■□□□□ 0.65
PPFIA3-206ENST00000602655 ADAMTS13Q76LX8 1427 aa19.12■□□□□ 0.65
PPFIA3-206ENST00000602655 SMC4Q9NTJ3 1288 aa19.12■□□□□ 0.65
PPFIA3-206ENST00000602655 NAP1L2Q9ULW6 460 aaPredicted RBP19.12■□□□□ 0.65
PPFIA3-206ENST00000602655 KRT24Q2M2I5 525 aa19.1■□□□□ 0.65
PPFIA3-206ENST00000602655 AEBP2Q6ZN18 517 aaPredicted RBP19.1■□□□□ 0.65
PPFIA3-206ENST00000602655 PHF8Q9UPP1 1060 aa19.1■□□□□ 0.65
PPFIA3-206ENST00000602655 POLR1AO95602 1720 aaPredicted RBP19.1■□□□□ 0.65
PPFIA3-206ENST00000602655 ZNF692Q9BU19 519 aaPredicted RBP19.1■□□□□ 0.65
PPFIA3-206ENST00000602655 MAPK8IP2Q13387 824 aaPredicted RBP19.09■□□□□ 0.65
PPFIA3-206ENST00000602655 ZSCAN30Q86W11 494 aa19.09■□□□□ 0.65
PPFIA3-206ENST00000602655 DNTTIP2Q5QJE6 756 aaKnown RBP19.08■□□□□ 0.65
PPFIA3-206ENST00000602655 FOXD4L1Q9NU39 408 aa19.08■□□□□ 0.65
PPFIA3-206ENST00000602655 DDX11L8A8MPP1 907 aa19.08■□□□□ 0.64
PPFIA3-206ENST00000602655 HAP1P54257 671 aaPredicted RBP19.08■□□□□ 0.64
PPFIA3-206ENST00000602655 FTSJ3Q8IY81 847 aaKnown RBP19.08■□□□□ 0.64
PPFIA3-206ENST00000602655 ANTXR1Q9H6X2 564 aa19.08■□□□□ 0.64
PPFIA3-206ENST00000602655 SPATA31D1Q6ZQQ2 1576 aa19.08■□□□□ 0.64
PPFIA3-206ENST00000602655 PLCD3Q8N3E9 789 aa19.08■□□□□ 0.64
PPFIA3-206ENST00000602655 MFAP1P55081 439 aaKnown RBP19.07■□□□□ 0.64
PPFIA3-206ENST00000602655 NASPP49321 788 aaPredicted RBP19.07■□□□□ 0.64
PPFIA3-206ENST00000602655 SMAP1Q8IYB5 467 aaPredicted RBP19.07■□□□□ 0.64
PPFIA3-206ENST00000602655 PLEKHG1Q9ULL1 1385 aa19.07■□□□□ 0.64
PPFIA3-206ENST00000602655 EIF4A2Q14240 407 aaKnown RBP19.06■□□□□ 0.64
PPFIA3-206ENST00000602655 OFD1O75665 1012 aa19.06■□□□□ 0.64
PPFIA3-206ENST00000602655 POLR3AO14802 1390 aaPredicted RBP19.06■□□□□ 0.64
PPFIA3-206ENST00000602655 VGLL3A8MV65 326 aa19.06■□□□□ 0.64
PPFIA3-206ENST00000602655 GAS2L3Q86XJ1 694 aa19.06■□□□□ 0.64
PPFIA3-206ENST00000602655 A0A0G2JS52 829 aa19.05■□□□□ 0.64
PPFIA3-206ENST00000602655 LAMC1P11047 1609 aa19.05■□□□□ 0.64
PPFIA3-206ENST00000602655 USP19O94966 1318 aa19.05■□□□□ 0.64
PPFIA3-206ENST00000602655 CDK11BP21127 795 aaKnown RBP19.05■□□□□ 0.64
PPFIA3-206ENST00000602655 MAP3K19Q56UN5 1328 aa19.05■□□□□ 0.64
PPFIA3-206ENST00000602655 ATF3P18847 181 aa19.05■□□□□ 0.64
PPFIA3-206ENST00000602655 LRRC59Q96AG4 307 aaKnown RBP19.05■□□□□ 0.64
PPFIA3-206ENST00000602655 HSCBQ8IWL3 235 aa19.04■□□□□ 0.64
PPFIA3-206ENST00000602655 SETBP1Q9Y6X0 1596 aa19.04■□□□□ 0.64
PPFIA3-206ENST00000602655 IGHDP01880 384 aa19.04■□□□□ 0.64
PPFIA3-206ENST00000602655 ZC3H13Q5T200 1668 aaKnown RBP19.03■□□□□ 0.64
PPFIA3-206ENST00000602655 CHRNA2Q15822 529 aa19.03■□□□□ 0.64
PPFIA3-206ENST00000602655 ITPRIPQ8IWB1 547 aa19.03■□□□□ 0.64
PPFIA3-206ENST00000602655 TRIM35Q9UPQ4 493 aa19.03■□□□□ 0.64
PPFIA3-206ENST00000602655 CBX1P83916 185 aa19.02■□□□□ 0.64
PPFIA3-206ENST00000602655 IFT172Q9UG01 1749 aa19.02■□□□□ 0.64
PPFIA3-206ENST00000602655 TSPYL6Q8N831 410 aa19.02■□□□□ 0.64
PPFIA3-206ENST00000602655 NPC1L1Q9UHC9 1359 aa19.02■□□□□ 0.64
PPFIA3-206ENST00000602655 SETD1BQ9UPS6 1966 aaKnown RBP19.01■□□□□ 0.63
PPFIA3-206ENST00000602655 CSB-PGBD3P0DP91 1061 aa19.01■□□□□ 0.63
PPFIA3-206ENST00000602655 CCDC173Q0VFZ6 552 aa19.01■□□□□ 0.63
PPFIA3-206ENST00000602655 ARHGEF28Q8N1W1 1705 aaKnown RBP19.01■□□□□ 0.63
PPFIA3-206ENST00000602655 BLMP54132 1417 aaPredicted RBP19■□□□□ 0.63
PPFIA3-206ENST00000602655 MYOM1P52179 1685 aa19■□□□□ 0.63
PPFIA3-206ENST00000602655 RLBP1P12271 317 aa19■□□□□ 0.63
PPFIA3-206ENST00000602655 NLRP1Q9C000 1473 aa19■□□□□ 0.63
PPFIA3-206ENST00000602655 APBB1O00213 710 aa19■□□□□ 0.63
PPFIA3-206ENST00000602655 IL13P35225 146 aa19■□□□□ 0.63
PPFIA3-206ENST00000602655 CD163L1Q9NR16 1453 aa19■□□□□ 0.63
PPFIA3-206ENST00000602655 PUS7Q96PZ0 661 aaKnown RBP18.99■□□□□ 0.63
PPFIA3-206ENST00000602655 GTF2E1P29083 439 aaPredicted RBP18.99■□□□□ 0.63
PPFIA3-206ENST00000602655 SSH1Q8WYL5 1049 aa18.99■□□□□ 0.63
PPFIA3-206ENST00000602655 RTF1Q92541 710 aaKnown RBP18.99■□□□□ 0.63
PPFIA3-206ENST00000602655 GBP4Q96PP9 640 aa18.99■□□□□ 0.63
PPFIA3-206ENST00000602655 FCHSD2O94868 740 aa18.98■□□□□ 0.63
PPFIA3-206ENST00000602655 HSP90AB1P08238 724 aaKnown RBP18.98■□□□□ 0.63
PPFIA3-206ENST00000602655 C1orf115Q9H7X2 142 aa18.98■□□□□ 0.63
PPFIA3-206ENST00000602655 CPS1P31327 1500 aa18.98■□□□□ 0.63
PPFIA3-206ENST00000602655 RARSP54136 660 aaKnown RBP18.98■□□□□ 0.63
PPFIA3-206ENST00000602655 IGSF3O75054 1194 aa18.97■□□□□ 0.63
PPFIA3-206ENST00000602655 ZNF521Q96K83 1311 aa18.97■□□□□ 0.63
PPFIA3-206ENST00000602655 RIMS1Q86UR5 1692 aaKnown RBP18.97■□□□□ 0.63
PPFIA3-206ENST00000602655 MTERF4Q7Z6M4 381 aaKnown RBP18.97■□□□□ 0.63
PPFIA3-206ENST00000602655 PLEKHF1Q96S99 279 aa18.97■□□□□ 0.63
PPFIA3-206ENST00000602655 PPP4R3BQ5MIZ7 849 aa18.97■□□□□ 0.63
PPFIA3-206ENST00000602655 EYA1Q99502 592 aa18.97■□□□□ 0.63
PPFIA3-206ENST00000602655 NOB1Q9ULX3 412 aaKnown RBP18.97■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms