RNA–Protein interactions for RNA: ENST00000601538.5

SHANK2-218, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SHANK2, Length 9,062 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-218ENST00000601538 STK26Q9P289 416 aa14.36□□□□□ -0.11
SHANK2-218ENST00000601538 POLR1AO95602 1720 aaPredicted RBP14.36□□□□□ -0.11
SHANK2-218ENST00000601538 GOLGA6L9A6NEM1 432 aa14.36□□□□□ -0.11
SHANK2-218ENST00000601538 CCDC175P0C221 793 aa14.36□□□□□ -0.11
SHANK2-218ENST00000601538 CETN2P41208 172 aa14.36□□□□□ -0.11
SHANK2-218ENST00000601538 CCDC83Q8IWF9 413 aa14.36□□□□□ -0.11
SHANK2-218ENST00000601538 MAP3K1Q13233 1512 aa14.36□□□□□ -0.11
SHANK2-218ENST00000601538 WDR97A6NE52 1622 aa14.36□□□□□ -0.11
SHANK2-218ENST00000601538 ARHGAP29Q52LW3 1261 aa14.36□□□□□ -0.11
SHANK2-218ENST00000601538 GPATCH11Q8N954 259 aa14.36□□□□□ -0.11
SHANK2-218ENST00000601538 C6orf163Q5TEZ5 329 aa14.36□□□□□ -0.11
SHANK2-218ENST00000601538 SEPT6Q14141 434 aa14.36□□□□□ -0.11
SHANK2-218ENST00000601538 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.35□□□□□ -0.11
SHANK2-218ENST00000601538 BCCIPQ9P287 314 aaKnown RBP eCLIP14.35□□□□□ -0.111e-6■■■■□ 23.4
SHANK2-218ENST00000601538 STK38Q15208 465 aa14.35□□□□□ -0.11
SHANK2-218ENST00000601538 TICAM2Q86XR7 235 aa14.35□□□□□ -0.11
SHANK2-218ENST00000601538 ERC1Q8IUD2 1116 aa14.35□□□□□ -0.11
SHANK2-218ENST00000601538 PTPN14Q15678 1187 aa14.35□□□□□ -0.11
SHANK2-218ENST00000601538 TAF4BQ92750 862 aa14.35□□□□□ -0.11
SHANK2-218ENST00000601538 STAC3Q96MF2 364 aa14.35□□□□□ -0.11
SHANK2-218ENST00000601538 EFCAB5A4FU69 1503 aa14.35□□□□□ -0.11
SHANK2-218ENST00000601538 SOGA1O94964 1423 aa14.34□□□□□ -0.11
SHANK2-218ENST00000601538 BMS1Q14692 1282 aaKnown RBP14.34□□□□□ -0.11
SHANK2-218ENST00000601538 TRIM21P19474 475 aaKnown RBP14.34□□□□□ -0.11
SHANK2-218ENST00000601538 BRPF1P55201 1214 aaPredicted RBP14.34□□□□□ -0.11
SHANK2-218ENST00000601538 PLIN1O60240 522 aa14.34□□□□□ -0.11
SHANK2-218ENST00000601538 KIF5CO60282 957 aa14.34□□□□□ -0.11
SHANK2-218ENST00000601538 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.34□□□□□ -0.118e-9■■■■■ 30
SHANK2-218ENST00000601538 UVSSAQ2YD98 709 aa14.33□□□□□ -0.11
SHANK2-218ENST00000601538 DAAM2Q86T65 1068 aa14.33□□□□□ -0.11
SHANK2-218ENST00000601538 ZMYM3Q14202 1370 aa14.33□□□□□ -0.11
SHANK2-218ENST00000601538 TEFQ10587 303 aa14.33□□□□□ -0.12
SHANK2-218ENST00000601538 FAM114A1Q8IWE2 563 aa14.33□□□□□ -0.12
SHANK2-218ENST00000601538 TTC5Q8N0Z6 440 aa14.33□□□□□ -0.12
SHANK2-218ENST00000601538 WDR66Q8TBY9 1149 aa14.33□□□□□ -0.12
SHANK2-218ENST00000601538 ZNF622Q969S3 477 aaKnown RBP eCLIP14.33□□□□□ -0.12
SHANK2-218ENST00000601538 TAOK3Q9H2K8 898 aa14.33□□□□□ -0.12
SHANK2-218ENST00000601538 SARNPP82979 210 aaKnown RBP14.33□□□□□ -0.12
SHANK2-218ENST00000601538 DNAAF4Q8WXU2 420 aa14.33□□□□□ -0.12
SHANK2-218ENST00000601538 SRRTQ9BXP5 876 aaKnown RBP14.33□□□□□ -0.12
SHANK2-218ENST00000601538 EVC2Q86UK5 1308 aa14.33□□□□□ -0.12
SHANK2-218ENST00000601538 FMNL2Q96PY5 1086 aa14.33□□□□□ -0.12
SHANK2-218ENST00000601538 AKNAQ7Z591 1439 aa14.32□□□□□ -0.12
SHANK2-218ENST00000601538 MNAT1P51948 309 aa14.32□□□□□ -0.12
SHANK2-218ENST00000601538 BCL11BQ9C0K0 894 aaPredicted RBP14.32□□□□□ -0.12
SHANK2-218ENST00000601538 CDKL5O76039 1030 aa14.32□□□□□ -0.12
SHANK2-218ENST00000601538 PAF1Q8N7H5 531 aa14.32□□□□□ -0.12
SHANK2-218ENST00000601538 FYCO1Q9BQS8 1478 aa14.32□□□□□ -0.12
SHANK2-218ENST00000601538 SFPQP23246 707 aaKnown RBP eCLIP14.32□□□□□ -0.122e-6■■■□□ 16.8
SHANK2-218ENST00000601538 IPO4Q8TEX9 1081 aaKnown RBP14.32□□□□□ -0.12
SHANK2-218ENST00000601538 DDX12PQ92771 950 aa14.32□□□□□ -0.12
SHANK2-218ENST00000601538 CPSF2Q9P2I0 782 aaKnown RBP14.32□□□□□ -0.12
SHANK2-218ENST00000601538 SMARCA4P51532 1647 aa14.32□□□□□ -0.12
SHANK2-218ENST00000601538 CASQ1P31415 396 aa14.32□□□□□ -0.12
SHANK2-218ENST00000601538 RASSF4Q9H2L5 321 aa14.32□□□□□ -0.12
SHANK2-218ENST00000601538 CARMIL2Q6F5E8 1435 aa14.32□□□□□ -0.12
SHANK2-218ENST00000601538 FIBPO43427 364 aa14.31□□□□□ -0.12
SHANK2-218ENST00000601538 KLHL34Q8N239 644 aa14.31□□□□□ -0.12
SHANK2-218ENST00000601538 DNAI2Q9GZS0 605 aa14.31□□□□□ -0.12
SHANK2-218ENST00000601538 PPP4R3BQ5MIZ7 849 aa14.31□□□□□ -0.12
SHANK2-218ENST00000601538 OGFRQ9NZT2 677 aa14.31□□□□□ -0.12
SHANK2-218ENST00000601538 TDO2P48775 406 aa14.31□□□□□ -0.12
SHANK2-218ENST00000601538 TRIM22Q8IYM9 498 aa14.31□□□□□ -0.12
SHANK2-218ENST00000601538 NAA15Q9BXJ9 866 aaKnown RBP14.31□□□□□ -0.12
SHANK2-218ENST00000601538 SWAP70Q9UH65 585 aa14.31□□□□□ -0.12
SHANK2-218ENST00000601538 RAD21O60216 631 aa14.3□□□□□ -0.12
SHANK2-218ENST00000601538 POTEJP0CG39 1038 aa14.3□□□□□ -0.12
SHANK2-218ENST00000601538 FYB1O15117 783 aa14.3□□□□□ -0.12
SHANK2-218ENST00000601538 KRT18P05783 430 aaKnown RBP14.3□□□□□ -0.12
SHANK2-218ENST00000601538 K7ELQ4 463 aaPredicted RBP14.3□□□□□ -0.12
SHANK2-218ENST00000601538 ME1P48163 572 aa14.3□□□□□ -0.12
SHANK2-218ENST00000601538 GNAI1P63096 354 aa14.3□□□□□ -0.12
SHANK2-218ENST00000601538 RUNDC1Q96C34 613 aa14.3□□□□□ -0.12
SHANK2-218ENST00000601538 BCL2L13Q9BXK5 485 aa14.3□□□□□ -0.12
SHANK2-218ENST00000601538 VPS36Q86VN1 386 aa14.3□□□□□ -0.12
SHANK2-218ENST00000601538 COG3Q96JB2 828 aa14.3□□□□□ -0.12
SHANK2-218ENST00000601538 UPF3BQ9BZI7 483 aaKnown RBP14.3□□□□□ -0.12
SHANK2-218ENST00000601538 GSDMDP57764 484 aa14.29□□□□□ -0.12
SHANK2-218ENST00000601538 CCDC171Q6TFL3 1326 aa14.29□□□□□ -0.12
SHANK2-218ENST00000601538 NEK4P51957 841 aa14.29□□□□□ -0.12
SHANK2-218ENST00000601538 HSPA4P34932 840 aa14.29□□□□□ -0.12
SHANK2-218ENST00000601538 IFFO1Q0D2I5 559 aa14.29□□□□□ -0.12
SHANK2-218ENST00000601538 DDX46Q7L014 1031 aaKnown RBP14.29□□□□□ -0.12
SHANK2-218ENST00000601538 TIAM1Q13009 1591 aa14.29□□□□□ -0.12
SHANK2-218ENST00000601538 GCC1Q96CN9 775 aa14.29□□□□□ -0.12
SHANK2-218ENST00000601538 MYCBPQ99417 103 aaPredicted RBP14.29□□□□□ -0.12
SHANK2-218ENST00000601538 VIRMAQ69YN4 1812 aaKnown RBP14.29□□□□□ -0.12
SHANK2-218ENST00000601538 CCDC27Q2M243 656 aa14.29□□□□□ -0.12
SHANK2-218ENST00000601538 NUP62CLQ9H1M0 184 aa14.29□□□□□ -0.12
SHANK2-218ENST00000601538 KLHL40Q2TBA0 621 aa14.28□□□□□ -0.12
SHANK2-218ENST00000601538 LNPKQ9C0E8 428 aa14.28□□□□□ -0.12
SHANK2-218ENST00000601538 ANKS4BQ8N8V4 417 aa14.28□□□□□ -0.12
SHANK2-218ENST00000601538 NGDNQ8NEJ9 315 aaKnown RBP14.28□□□□□ -0.12
SHANK2-218ENST00000601538 SPA17Q15506 151 aa14.28□□□□□ -0.12
SHANK2-218ENST00000601538 ZHX1Q9UKY1 873 aaPredicted RBP14.28□□□□□ -0.12
SHANK2-218ENST00000601538 PPP1R12BO60237 982 aaPredicted RBP14.28□□□□□ -0.12
SHANK2-218ENST00000601538 MAP3K11Q16584 847 aa14.28□□□□□ -0.12
SHANK2-218ENST00000601538 TBC1D2BQ9UPU7 963 aa14.28□□□□□ -0.12
SHANK2-218ENST00000601538 TACO1Q9BSH4 297 aaKnown RBP14.27□□□□□ -0.12
SHANK2-218ENST00000601538 CFAP65Q6ZU64 1925 aaKnown RBP14.27□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms