RNA–Protein interactions for RNA: ENST00000600220.5

ZNF544-217, Transcript of zinc finger protein 544, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene ZNF544, Length 2,837 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF544-217ENST00000600220 BCL2L13Q9BXK5 485 aa9.9□□□□□ -0.82
ZNF544-217ENST00000600220 PODXL2Q9NZ53 605 aa9.9□□□□□ -0.82
ZNF544-217ENST00000600220 CABP1Q9NZU7 370 aa9.9□□□□□ -0.82
ZNF544-217ENST00000600220 PCDHB15Q9Y5E8 787 aa9.9□□□□□ -0.82
ZNF544-217ENST00000600220 TRMT2AQ8IZ69 625 aaKnown RBP9.9□□□□□ -0.82
ZNF544-217ENST00000600220 CCDC61Q9Y6R9 512 aa9.9□□□□□ -0.82
ZNF544-217ENST00000600220 PLEKHG5O94827 1062 aa9.89□□□□□ -0.83
ZNF544-217ENST00000600220 KIAA1211Q6ZU35 1233 aa9.89□□□□□ -0.83
ZNF544-217ENST00000600220 GAS2L3Q86XJ1 694 aa9.89□□□□□ -0.83
ZNF544-217ENST00000600220 C22orf23Q9BZE7 217 aa9.89□□□□□ -0.83
ZNF544-217ENST00000600220 NKTRP30414 1462 aaKnown RBP9.89□□□□□ -0.83
ZNF544-217ENST00000600220 PRR36Q9H6K5 1346 aa9.89□□□□□ -0.83
ZNF544-217ENST00000600220 ARID3AQ99856 593 aa9.89□□□□□ -0.83
ZNF544-217ENST00000600220 NALCNQ8IZF0 1738 aa9.89□□□□□ -0.83
ZNF544-217ENST00000600220 PLEKHG3A1L390 1219 aa9.88□□□□□ -0.83
ZNF544-217ENST00000600220 E9PSI1 815 aa9.88□□□□□ -0.83
ZNF544-217ENST00000600220 PDE3AQ14432 1141 aa9.88□□□□□ -0.83
ZNF544-217ENST00000600220 ZNF692Q9BU19 519 aaPredicted RBP9.88□□□□□ -0.83
ZNF544-217ENST00000600220 PDCL3Q9H2J4 239 aa9.88□□□□□ -0.83
ZNF544-217ENST00000600220 COL3A1P02461 1466 aaPredicted RBP9.88□□□□□ -0.83
ZNF544-217ENST00000600220 FYB1O15117 783 aa9.88□□□□□ -0.83
ZNF544-217ENST00000600220 FOXD4L1Q9NU39 408 aa9.88□□□□□ -0.83
ZNF544-217ENST00000600220 RLBP1P12271 317 aa9.87□□□□□ -0.83
ZNF544-217ENST00000600220 USP54Q70EL1 1684 aa9.87□□□□□ -0.83
ZNF544-217ENST00000600220 TPM2P07951 284 aa9.87□□□□□ -0.83
ZNF544-217ENST00000600220 PMFBP1Q8TBY8 1022 aa9.87□□□□□ -0.83
ZNF544-217ENST00000600220 RRP7AQ9Y3A4 280 aaKnown RBP9.87□□□□□ -0.83
ZNF544-217ENST00000600220 HSCBQ8IWL3 235 aa9.86□□□□□ -0.83
ZNF544-217ENST00000600220 NGEFQ8N5V2 710 aa9.86□□□□□ -0.83
ZNF544-217ENST00000600220 SSH2Q76I76 1423 aa9.86□□□□□ -0.83
ZNF544-217ENST00000600220 LRRC7Q96NW7 1537 aa9.86□□□□□ -0.83
ZNF544-217ENST00000600220 ADGRL3Q9HAR2 1447 aa9.86□□□□□ -0.83
ZNF544-217ENST00000600220 DDX11L8A8MPP1 907 aa9.86□□□□□ -0.83
ZNF544-217ENST00000600220 KCNA6P17658 529 aa9.86□□□□□ -0.83
ZNF544-217ENST00000600220 VIRMAQ69YN4 1812 aaKnown RBP9.85□□□□□ -0.83
ZNF544-217ENST00000600220 CFAP53Q96M91 514 aa9.85□□□□□ -0.83
ZNF544-217ENST00000600220 AATKQ6ZMQ8 1374 aa9.85□□□□□ -0.83
ZNF544-217ENST00000600220 PNPLA6Q8IY17 1366 aa9.85□□□□□ -0.83
ZNF544-217ENST00000600220 USP6P35125 1406 aa9.85□□□□□ -0.83
ZNF544-217ENST00000600220 FAM13BQ9NYF5 915 aa9.85□□□□□ -0.83
ZNF544-217ENST00000600220 TNPO1Q92973 898 aaKnown RBP9.84□□□□□ -0.83
ZNF544-217ENST00000600220 RWDD1Q9H446 243 aaPredicted RBP9.84□□□□□ -0.83
ZNF544-217ENST00000600220 IQSEC2Q5JU85 1478 aa9.84□□□□□ -0.83
ZNF544-217ENST00000600220 NCBP3Q53F19 620 aaKnown RBP9.84□□□□□ -0.83
ZNF544-217ENST00000600220 A0A0U1RQG5 324 aaPredicted RBP9.83□□□□□ -0.84
ZNF544-217ENST00000600220 RGPD8O14715 1765 aaPredicted RBP9.83□□□□□ -0.84
ZNF544-217ENST00000600220 MTHFSP49914 203 aa9.83□□□□□ -0.84
ZNF544-217ENST00000600220 GGNBP2Q9H3C7 697 aa9.83□□□□□ -0.84
ZNF544-217ENST00000600220 OVOS2A0A0J9YW53 1432 aa9.83□□□□□ -0.84
ZNF544-217ENST00000600220 OVOS2Q6IE36 1432 aa9.83□□□□□ -0.84
ZNF544-217ENST00000600220 CDK12Q9NYV4 1490 aaPredicted RBP9.83□□□□□ -0.84
ZNF544-217ENST00000600220 WWC1Q8IX03 1113 aa9.83□□□□□ -0.84
ZNF544-217ENST00000600220 NCOA3Q9Y6Q9 1424 aa9.82□□□□□ -0.84
ZNF544-217ENST00000600220 TTC21AQ8NDW8 1320 aa9.82□□□□□ -0.84
ZNF544-217ENST00000600220 RARSP54136 660 aaKnown RBP9.82□□□□□ -0.84
ZNF544-217ENST00000600220 R3HCC1Q9Y3T6 440 aaKnown RBP9.82□□□□□ -0.84
ZNF544-217ENST00000600220 ACEP12821 1306 aa9.82□□□□□ -0.84
ZNF544-217ENST00000600220 HSP90AB1P08238 724 aaKnown RBP9.82□□□□□ -0.84
ZNF544-217ENST00000600220 TNNT2P45379 298 aaPredicted RBP9.82□□□□□ -0.84
ZNF544-217ENST00000600220 NCKAP5LQ9HCH0 1330 aa9.82□□□□□ -0.84
ZNF544-217ENST00000600220 MSNP26038 577 aaKnown RBP9.81□□□□□ -0.84
ZNF544-217ENST00000600220 TTC21BQ7Z4L5 1316 aa9.81□□□□□ -0.84
ZNF544-217ENST00000600220 USP31Q70CQ4 1352 aa9.81□□□□□ -0.84
ZNF544-217ENST00000600220 LMTK3Q96Q04 1460 aa9.81□□□□□ -0.84
ZNF544-217ENST00000600220 NASPP49321 788 aaPredicted RBP9.81□□□□□ -0.84
ZNF544-217ENST00000600220 RIPK4P57078 832 aa9.81□□□□□ -0.84
ZNF544-217ENST00000600220 MAP2P11137 1827 aaKnown RBP9.8□□□□□ -0.84
ZNF544-217ENST00000600220 ANP32BQ92688 251 aaKnown RBP9.8□□□□□ -0.84
ZNF544-217ENST00000600220 GBP4Q96PP9 640 aa9.8□□□□□ -0.84
ZNF544-217ENST00000600220 ZSCAN30Q86W11 494 aa9.8□□□□□ -0.84
ZNF544-217ENST00000600220 PRDM4Q9UKN5 801 aa9.8□□□□□ -0.84
ZNF544-217ENST00000600220 ISY1Q9ULR0 285 aaKnown RBP9.8□□□□□ -0.84
ZNF544-217ENST00000600220 PIK3C2AO00443 1686 aa9.8□□□□□ -0.84
ZNF544-217ENST00000600220 NCLP19338 710 aaKnown RBP9.79□□□□□ -0.84
ZNF544-217ENST00000600220 CALD1Q05682 793 aaKnown RBP9.79□□□□□ -0.84
ZNF544-217ENST00000600220 KIF1AQ12756 1690 aa9.79□□□□□ -0.84
ZNF544-217ENST00000600220 MARF1Q9Y4F3 1742 aaKnown RBP9.79□□□□□ -0.84
ZNF544-217ENST00000600220 KDM4FA0A1W2PPD8 638 aa9.79□□□□□ -0.84
ZNF544-217ENST00000600220 OFD1O75665 1012 aa9.79□□□□□ -0.84
ZNF544-217ENST00000600220 CCDC173Q0VFZ6 552 aa9.79□□□□□ -0.84
ZNF544-217ENST00000600220 NME9Q86XW9 330 aa9.79□□□□□ -0.84
ZNF544-217ENST00000600220 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.79□□□□□ -0.84
ZNF544-217ENST00000600220 COG3Q96JB2 828 aa9.79□□□□□ -0.84
ZNF544-217ENST00000600220 DCCP43146 1447 aa9.79□□□□□ -0.84
ZNF544-217ENST00000600220 STRCP1A6NGW2 1772 aa9.79□□□□□ -0.84
ZNF544-217ENST00000600220 ZBTB7CA1YPR0 619 aa9.78□□□□□ -0.84
ZNF544-217ENST00000600220 RUNDC1Q96C34 613 aa9.78□□□□□ -0.84
ZNF544-217ENST00000600220 STRCQ7RTU9 1775 aa9.78□□□□□ -0.84
ZNF544-217ENST00000600220 FTSJ3Q8IY81 847 aaKnown RBP9.78□□□□□ -0.84
ZNF544-217ENST00000600220 XPCQ01831 940 aaPredicted RBP9.78□□□□□ -0.84
ZNF544-217ENST00000600220 PRDM10Q9NQV6 1147 aa9.78□□□□□ -0.84
ZNF544-217ENST00000600220 POLKQ9UBT6 870 aa9.78□□□□□ -0.84
ZNF544-217ENST00000600220 SKOR2Q2VWA4 1001 aaPredicted RBP9.77□□□□□ -0.85
ZNF544-217ENST00000600220 DDX49Q9Y6V7 483 aaKnown RBP9.77□□□□□ -0.85
ZNF544-217ENST00000600220 SSFA2P28290 1259 aa9.77□□□□□ -0.85
ZNF544-217ENST00000600220 CCDC27Q2M243 656 aa9.77□□□□□ -0.85
ZNF544-217ENST00000600220 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.77□□□□□ -0.85
ZNF544-217ENST00000600220 PHF23Q9BUL5 403 aaPredicted RBP9.77□□□□□ -0.85
ZNF544-217ENST00000600220 DDIT3P35638 169 aa9.76□□□□□ -0.85
ZNF544-217ENST00000600220 DIAPH1O60610 1272 aaKnown RBP9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms