RNA–Protein interactions for RNA: ENST00000592657.1

LDLRAD4-216, Transcript of low density lipoprotein receptor class A domain containing 4, humanhuman

TSL 2

Gene LDLRAD4, Length 464 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD4-216ENST00000592657 THAP11Q96EK4 314 aa9.63□□□□□ -0.87
LDLRAD4-216ENST00000592657 KDM5CP41229 1560 aa9.62□□□□□ -0.87
LDLRAD4-216ENST00000592657 ZFYVE16Q7Z3T8 1539 aa9.61□□□□□ -0.87
LDLRAD4-216ENST00000592657 KIDINS220Q9ULH0 1771 aa9.61□□□□□ -0.87
LDLRAD4-216ENST00000592657 CYB5RLQ6IPT4 315 aa9.61□□□□□ -0.87
LDLRAD4-216ENST00000592657 BRICD5Q6PL45 260 aa9.61□□□□□ -0.87
LDLRAD4-216ENST00000592657 NLRP7Q8WX94 980 aa9.61□□□□□ -0.87
LDLRAD4-216ENST00000592657 SALL2Q9Y467 1007 aaPredicted RBP9.61□□□□□ -0.87
LDLRAD4-216ENST00000592657 HECW2Q9P2P5 1572 aa9.61□□□□□ -0.87
LDLRAD4-216ENST00000592657 PLEKHH2Q8IVE3 1493 aa9.6□□□□□ -0.87
LDLRAD4-216ENST00000592657 PLCH2O75038 1416 aa9.6□□□□□ -0.87
LDLRAD4-216ENST00000592657 PLEKHD1A6NEE1 506 aa9.6□□□□□ -0.87
LDLRAD4-216ENST00000592657 SNIP1Q8TAD8 396 aaKnown RBP9.6□□□□□ -0.87
LDLRAD4-216ENST00000592657 FANCAO15360 1455 aa9.59□□□□□ -0.87
LDLRAD4-216ENST00000592657 CCDC141Q6ZP82 1450 aa9.59□□□□□ -0.87
LDLRAD4-216ENST00000592657 DAPK1P53355 1430 aa9.59□□□□□ -0.87
LDLRAD4-216ENST00000592657 AKNAQ7Z591 1439 aa9.59□□□□□ -0.87
LDLRAD4-216ENST00000592657 TRIM26Q12899 539 aaPredicted RBP9.59□□□□□ -0.87
LDLRAD4-216ENST00000592657 Q3C1V9 767 aa9.59□□□□□ -0.87
LDLRAD4-216ENST00000592657 PRDM9Q9NQV7 894 aa9.59□□□□□ -0.87
LDLRAD4-216ENST00000592657 ARHGEF12Q9NZN5 1544 aa9.59□□□□□ -0.87
LDLRAD4-216ENST00000592657 ABCA6Q8N139 1617 aa9.59□□□□□ -0.87
LDLRAD4-216ENST00000592657 BCORL1Q5H9F3 1711 aa9.59□□□□□ -0.87
LDLRAD4-216ENST00000592657 ADGRL2O95490 1459 aa9.59□□□□□ -0.87
LDLRAD4-216ENST00000592657 ZMYM4Q5VZL5 1548 aa9.58□□□□□ -0.88
LDLRAD4-216ENST00000592657 KDM6BO15054 1643 aa9.58□□□□□ -0.88
LDLRAD4-216ENST00000592657 SMCPP49901 116 aaPredicted RBP9.58□□□□□ -0.88
LDLRAD4-216ENST00000592657 INSM1Q01101 510 aaPredicted RBP9.58□□□□□ -0.88
LDLRAD4-216ENST00000592657 NEO1Q92859 1461 aa9.58□□□□□ -0.88
LDLRAD4-216ENST00000592657 MBD5Q9P267 1494 aa9.58□□□□□ -0.88
LDLRAD4-216ENST00000592657 EIF2AK4Q9P2K8 1649 aaKnown RBP9.57□□□□□ -0.88
LDLRAD4-216ENST00000592657 WNT7AO00755 349 aa9.57□□□□□ -0.88
LDLRAD4-216ENST00000592657 SENP2Q9HC62 589 aa9.57□□□□□ -0.88
LDLRAD4-216ENST00000592657 ADGRL1O94910 1474 aa9.57□□□□□ -0.88
LDLRAD4-216ENST00000592657 PTPRKQ15262 1439 aa9.56□□□□□ -0.88
LDLRAD4-216ENST00000592657 ATP7AQ04656 1500 aa9.56□□□□□ -0.88
LDLRAD4-216ENST00000592657 DEPDC5O75140 1603 aa9.56□□□□□ -0.88
LDLRAD4-216ENST00000592657 UNC13BO14795 1591 aa9.56□□□□□ -0.88
LDLRAD4-216ENST00000592657 MSS51Q4VC12 460 aa9.56□□□□□ -0.88
LDLRAD4-216ENST00000592657 LCE2AQ5TA79 106 aaPredicted RBP9.56□□□□□ -0.88
LDLRAD4-216ENST00000592657 CCDC24Q8N4L8 307 aa9.56□□□□□ -0.88
LDLRAD4-216ENST00000592657 STK17AQ9UEE5 414 aa9.56□□□□□ -0.88
LDLRAD4-216ENST00000592657 ABCC5O15440 1437 aa9.56□□□□□ -0.88
LDLRAD4-216ENST00000592657 KIAA1107Q9UPP5 1409 aa9.56□□□□□ -0.88
LDLRAD4-216ENST00000592657 TEX14Q8IWB6 1497 aa9.55□□□□□ -0.88
LDLRAD4-216ENST00000592657 TESPA1A2RU30 521 aaPredicted RBP9.55□□□□□ -0.88
LDLRAD4-216ENST00000592657 RNF19BQ6ZMZ0 732 aa9.55□□□□□ -0.88
LDLRAD4-216ENST00000592657 CD109Q6YHK3 1445 aa9.55□□□□□ -0.88
LDLRAD4-216ENST00000592657 TRIM32Q13049 653 aa9.54□□□□□ -0.88
LDLRAD4-216ENST00000592657 MRGPRX2Q96LB1 330 aa9.54□□□□□ -0.88
LDLRAD4-216ENST00000592657 ATP13A2Q9NQ11 1180 aa9.54□□□□□ -0.88
LDLRAD4-216ENST00000592657 ARHGEF40Q8TER5 1519 aa9.54□□□□□ -0.88
LDLRAD4-216ENST00000592657 POGZQ7Z3K3 1410 aa9.54□□□□□ -0.88
LDLRAD4-216ENST00000592657 DIP2CQ9Y2E4 1556 aa9.54□□□□□ -0.88
LDLRAD4-216ENST00000592657 SIGLEC1Q9BZZ2 1709 aa9.53□□□□□ -0.88
LDLRAD4-216ENST00000592657 RNF17Q9BXT8 1623 aaKnown RBP9.53□□□□□ -0.88
LDLRAD4-216ENST00000592657 SMPD1P17405 629 aa9.53□□□□□ -0.88
LDLRAD4-216ENST00000592657 TIMELESSQ9UNS1 1208 aa9.53□□□□□ -0.88
LDLRAD4-216ENST00000592657 HFM1A2PYH4 1435 aa9.53□□□□□ -0.88
LDLRAD4-216ENST00000592657 C9orf84Q5VXU9 1444 aa9.53□□□□□ -0.88
LDLRAD4-216ENST00000592657 J3QL48 77 aa9.52□□□□□ -0.89
LDLRAD4-216ENST00000592657 TULP1O00294 542 aaPredicted RBP9.52□□□□□ -0.89
LDLRAD4-216ENST00000592657 CEP152O94986 1710 aa9.52□□□□□ -0.89
LDLRAD4-216ENST00000592657 REPIN1Q9BWE0 567 aaKnown RBP9.52□□□□□ -0.89
LDLRAD4-216ENST00000592657 GTF3C3Q9Y5Q9 886 aa9.52□□□□□ -0.89
LDLRAD4-216ENST00000592657 ZNF518AQ6AHZ1 1483 aa9.52□□□□□ -0.89
LDLRAD4-216ENST00000592657 NFX1Q12986 1120 aaKnown RBP9.51□□□□□ -0.89
LDLRAD4-216ENST00000592657 USB1Q9BQ65 265 aaKnown RBP9.51□□□□□ -0.89
LDLRAD4-216ENST00000592657 PCGF6Q9BYE7 350 aa9.51□□□□□ -0.89
LDLRAD4-216ENST00000592657 CFDP1Q9UEE9 299 aaPredicted RBP9.51□□□□□ -0.89
LDLRAD4-216ENST00000592657 ZNF644Q9H582 1327 aaPredicted RBP9.51□□□□□ -0.89
LDLRAD4-216ENST00000592657 ROCK1Q13464 1354 aa9.5□□□□□ -0.89
LDLRAD4-216ENST00000592657 TRAPPC8Q9Y2L5 1435 aa9.5□□□□□ -0.89
LDLRAD4-216ENST00000592657 IQGAP3Q86VI3 1631 aa9.5□□□□□ -0.89
LDLRAD4-216ENST00000592657 MROH1Q8NDA8 1641 aa9.5□□□□□ -0.89
LDLRAD4-216ENST00000592657 TERTO14746 1132 aaKnown RBP9.5□□□□□ -0.89
LDLRAD4-216ENST00000592657 SNRPBP14678 240 aaKnown RBP9.5□□□□□ -0.89
LDLRAD4-216ENST00000592657 FAM50AQ14320 339 aaKnown RBP9.5□□□□□ -0.89
LDLRAD4-216ENST00000592657 KIFC2Q96AC6 838 aa9.5□□□□□ -0.89
LDLRAD4-216ENST00000592657 KDM5DQ9BY66 1539 aa9.5□□□□□ -0.89
LDLRAD4-216ENST00000592657 REREQ9P2R6 1566 aa9.5□□□□□ -0.89
LDLRAD4-216ENST00000592657 NAIPQ13075 1403 aa9.49□□□□□ -0.89
LDLRAD4-216ENST00000592657 MAGI2Q86UL8 1455 aa9.49□□□□□ -0.89
LDLRAD4-216ENST00000592657 GPIHBP1Q8IV16 184 aa9.49□□□□□ -0.89
LDLRAD4-216ENST00000592657 PHOX2BQ99453 314 aa9.49□□□□□ -0.89
LDLRAD4-216ENST00000592657 DUOX2Q9NRD8 1548 aa9.49□□□□□ -0.89
LDLRAD4-216ENST00000592657 ZC3H13Q5T200 1668 aaKnown RBP9.48□□□□□ -0.89
LDLRAD4-216ENST00000592657 WIPF1O43516 503 aa9.48□□□□□ -0.89
LDLRAD4-216ENST00000592657 KDM4AO75164 1064 aa9.48□□□□□ -0.89
LDLRAD4-216ENST00000592657 MMP16P51512 607 aa9.48□□□□□ -0.89
LDLRAD4-216ENST00000592657 RC3H1Q5TC82 1133 aaKnown RBP9.48□□□□□ -0.89
LDLRAD4-216ENST00000592657 SLC16A10Q8TF71 515 aa9.48□□□□□ -0.89
LDLRAD4-216ENST00000592657 TRIM47Q96LD4 638 aa9.48□□□□□ -0.89
LDLRAD4-216ENST00000592657 PRDM15P57071 1507 aaPredicted RBP9.47□□□□□ -0.89
LDLRAD4-216ENST00000592657 TMEM132AQ24JP5 1023 aa9.47□□□□□ -0.89
LDLRAD4-216ENST00000592657 ERICH6Q7L0X2 663 aa9.47□□□□□ -0.89
LDLRAD4-216ENST00000592657 HPS1Q92902 700 aa9.47□□□□□ -0.89
LDLRAD4-216ENST00000592657 MLH3Q9UHC1 1453 aa9.47□□□□□ -0.89
LDLRAD4-216ENST00000592657 RTEL1-TNFRSF6BF6WH68 1400 aa9.46□□□□□ -0.9
LDLRAD4-216ENST00000592657 NCOA1Q15788 1441 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms