RNA–Protein interactions for RNA: ENST00000591782.1

VMP1-212, Transcript of vacuole membrane protein 1, humanhuman

TSL 5

Gene VMP1, Length 729 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-212ENST00000591782 FSHRP23945 695 aa6.96□□□□□ -1.3
VMP1-212ENST00000591782 GRM5P41594 1212 aa6.96□□□□□ -1.3
VMP1-212ENST00000591782 MCCD1P59942 119 aaPredicted RBP6.96□□□□□ -1.3
VMP1-212ENST00000591782 NBPF20Q3BBV1 942 aa6.96□□□□□ -1.3
VMP1-212ENST00000591782 HDGFL1Q5TGJ6 251 aa6.96□□□□□ -1.3
VMP1-212ENST00000591782 ZNF592Q92610 1267 aa6.96□□□□□ -1.3
VMP1-212ENST00000591782 KCTD15Q96SI1 283 aaPredicted RBP6.96□□□□□ -1.3
VMP1-212ENST00000591782 CDV3Q9UKY7 258 aaKnown RBP6.96□□□□□ -1.3
VMP1-212ENST00000591782 SUPT5HO00267 1087 aaKnown RBP6.95□□□□□ -1.3
VMP1-212ENST00000591782 GIGYF1O75420 1035 aaPredicted RBP6.95□□□□□ -1.3
VMP1-212ENST00000591782 CEP126Q9P2H0 1117 aa6.95□□□□□ -1.3
VMP1-212ENST00000591782 GFRA3O60609 400 aa6.94□□□□□ -1.3
VMP1-212ENST00000591782 SMPD1P17405 629 aa6.94□□□□□ -1.3
VMP1-212ENST00000591782 RAB15P59190 212 aa6.94□□□□□ -1.3
VMP1-212ENST00000591782 CALR3Q96L12 384 aaKnown RBP6.94□□□□□ -1.3
VMP1-212ENST00000591782 WASF2Q9Y6W5 498 aa6.94□□□□□ -1.3
VMP1-212ENST00000591782 ESPNB1AK53 854 aa6.93□□□□□ -1.3
VMP1-212ENST00000591782 PIK3CDO00329 1044 aa6.93□□□□□ -1.3
VMP1-212ENST00000591782 NR3C2P08235 984 aa6.93□□□□□ -1.3
VMP1-212ENST00000591782 NNTQ13423 1086 aa6.93□□□□□ -1.3
VMP1-212ENST00000591782 INTS6LQ5JSJ4 861 aaKnown RBP6.93□□□□□ -1.3
VMP1-212ENST00000591782 C1orf115Q9H7X2 142 aa6.93□□□□□ -1.3
VMP1-212ENST00000591782 NR5A1Q13285 461 aa6.92□□□□□ -1.3
VMP1-212ENST00000591782 SLFNL1Q499Z3 407 aa6.92□□□□□ -1.3
VMP1-212ENST00000591782 UCN2Q96RP3 112 aa6.92□□□□□ -1.3
VMP1-212ENST00000591782 NRG2O14511 850 aaPredicted RBP6.91□□□□□ -1.3
VMP1-212ENST00000591782 PHTF2Q8N3S3 785 aa6.91□□□□□ -1.3
VMP1-212ENST00000591782 FAM187AA6NFU0 413 aa6.9□□□□□ -1.3
VMP1-212ENST00000591782 ERVH48-1M5A8F1 160 aa6.9□□□□□ -1.3
VMP1-212ENST00000591782 TSGA10IPQ3SY00 556 aa6.9□□□□□ -1.3
VMP1-212ENST00000591782 RNF20Q5VTR2 975 aa6.9□□□□□ -1.3
VMP1-212ENST00000591782 RNF135Q8IUD6 432 aa6.9□□□□□ -1.3
VMP1-212ENST00000591782 SEPT12Q8IYM1 358 aa6.9□□□□□ -1.3
VMP1-212ENST00000591782 CCDC116Q8IYX3 515 aa6.9□□□□□ -1.3
VMP1-212ENST00000591782 HPS1Q92902 700 aa6.9□□□□□ -1.3
VMP1-212ENST00000591782 CCDC85AQ96PX6 553 aaPredicted RBP6.9□□□□□ -1.3
VMP1-212ENST00000591782 IRX2Q9BZI1 471 aaPredicted RBP6.9□□□□□ -1.3
VMP1-212ENST00000591782 PPP1R26Q5T8A7 1209 aaPredicted RBP6.89□□□□□ -1.31
VMP1-212ENST00000591782 TMPRSS4Q9NRS4 437 aa6.89□□□□□ -1.31
VMP1-212ENST00000591782 SKIP12755 728 aa6.88□□□□□ -1.31
VMP1-212ENST00000591782 LAPTM4AQ15012 233 aa6.88□□□□□ -1.31
VMP1-212ENST00000591782 PKDCCQ504Y2 493 aa6.88□□□□□ -1.31
VMP1-212ENST00000591782 TBC1D9Q6ZT07 1266 aa6.88□□□□□ -1.31
VMP1-212ENST00000591782 PLPP7Q8NBV4 271 aa6.88□□□□□ -1.31
VMP1-212ENST00000591782 PCDHB11Q9Y5F2 797 aa6.88□□□□□ -1.31
VMP1-212ENST00000591782 PALM3A6NDB9 673 aaPredicted RBP6.87□□□□□ -1.31
VMP1-212ENST00000591782 DHX9Q08211 1270 aaKnown RBP6.87□□□□□ -1.31
VMP1-212ENST00000591782 CCDC82Q8N4S0 544 aa6.87□□□□□ -1.31
VMP1-212ENST00000591782 ZNF784Q8NCA9 323 aaPredicted RBP6.87□□□□□ -1.31
VMP1-212ENST00000591782 ITPKCQ96DU7 683 aa6.87□□□□□ -1.31
VMP1-212ENST00000591782 CDCA7Q9BWT1 371 aaPredicted RBP6.87□□□□□ -1.31
VMP1-212ENST00000591782 KLF16Q9BXK1 252 aaPredicted RBP6.87□□□□□ -1.31
VMP1-212ENST00000591782 PPP1R12CQ9BZL4 782 aa6.87□□□□□ -1.31
VMP1-212ENST00000591782 CHIC2Q9UKJ5 165 aa6.87□□□□□ -1.31
VMP1-212ENST00000591782 DOLKQ9UPQ8 538 aa6.87□□□□□ -1.31
VMP1-212ENST00000591782 EMILIN1Q9Y6C2 1016 aa6.87□□□□□ -1.31
VMP1-212ENST00000591782 ATP9BO43861 1147 aa6.86□□□□□ -1.31
VMP1-212ENST00000591782 DGAT1O75907 488 aa6.86□□□□□ -1.31
VMP1-212ENST00000591782 ZIC2O95409 532 aaPredicted RBP6.86□□□□□ -1.31
VMP1-212ENST00000591782 TIMP2P16035 220 aa6.86□□□□□ -1.31
VMP1-212ENST00000591782 WDR4P57081 412 aaKnown RBP6.86□□□□□ -1.31
VMP1-212ENST00000591782 TRAF7Q6Q0C0 670 aa6.86□□□□□ -1.31
VMP1-212ENST00000591782 NFATC2IPQ8NCF5 419 aa6.86□□□□□ -1.31
VMP1-212ENST00000591782 CCDC97Q96F63 343 aaPredicted RBP6.86□□□□□ -1.31
VMP1-212ENST00000591782 ZFAND3Q9H8U3 227 aa6.86□□□□□ -1.31
VMP1-212ENST00000591782 TFIP11Q9UBB9 837 aaKnown RBP6.86□□□□□ -1.31
VMP1-212ENST00000591782 USP17L5A8MUK1 530 aa6.85□□□□□ -1.31
VMP1-212ENST00000591782 AVPP01185 164 aa6.85□□□□□ -1.31
VMP1-212ENST00000591782 SCTRP47872 440 aa6.85□□□□□ -1.31
VMP1-212ENST00000591782 MAP7D1Q3KQU3 841 aa6.85□□□□□ -1.31
VMP1-212ENST00000591782 OXLD1Q5BKU9 147 aa6.85□□□□□ -1.31
VMP1-212ENST00000591782 CCDC125Q86Z20 511 aa6.85□□□□□ -1.31
VMP1-212ENST00000591782 DEPDC4Q8N2C3 294 aa6.85□□□□□ -1.31
VMP1-212ENST00000591782 CYLDQ9NQC7 956 aa6.85□□□□□ -1.31
VMP1-212ENST00000591782 PGPEP1Q9NXJ5 209 aa6.85□□□□□ -1.31
VMP1-212ENST00000591782 LILRA1O75019 489 aa6.84□□□□□ -1.31
VMP1-212ENST00000591782 MYT1Q01538 1121 aa6.84□□□□□ -1.31
VMP1-212ENST00000591782 NCOA4Q13772 614 aa6.84□□□□□ -1.31
VMP1-212ENST00000591782 CFAP70Q5T0N1 1121 aa6.84□□□□□ -1.31
VMP1-212ENST00000591782 SERPINA10Q9UK55 444 aa6.84□□□□□ -1.31
VMP1-212ENST00000591782 MAFBQ9Y5Q3 323 aaPredicted RBP6.84□□□□□ -1.31
VMP1-212ENST00000591782 USP17L3A6NCW0 530 aa6.83□□□□□ -1.32
VMP1-212ENST00000591782 USP17L4A6NCW7 530 aa6.83□□□□□ -1.32
VMP1-212ENST00000591782 CAPN5O15484 640 aaPredicted RBP6.83□□□□□ -1.32
VMP1-212ENST00000591782 LMOD1P29536 600 aaPredicted RBP6.83□□□□□ -1.32
VMP1-212ENST00000591782 ERVK-9P63128 1117 aa6.83□□□□□ -1.32
VMP1-212ENST00000591782 CBLBQ13191 982 aa6.83□□□□□ -1.32
VMP1-212ENST00000591782 CC2D2BQ6DHV5 1058 aa6.83□□□□□ -1.32
VMP1-212ENST00000591782 USP17L2Q6R6M4 530 aa6.83□□□□□ -1.32
VMP1-212ENST00000591782 USP17L1Q7RTZ2 530 aa6.83□□□□□ -1.32
VMP1-212ENST00000591782 ARID3AQ99856 593 aa6.83□□□□□ -1.32
VMP1-212ENST00000591782 RFX1P22670 979 aa6.82□□□□□ -1.32
VMP1-212ENST00000591782 ADD1P35611 737 aaKnown RBP6.82□□□□□ -1.32
VMP1-212ENST00000591782 EML3Q32P44 896 aa6.82□□□□□ -1.32
VMP1-212ENST00000591782 PLEKHM2Q8IWE5 1019 aa6.82□□□□□ -1.32
VMP1-212ENST00000591782 MYCP01106 439 aaPredicted RBP6.81□□□□□ -1.32
VMP1-212ENST00000591782 USP4Q13107 963 aa6.81□□□□□ -1.32
VMP1-212ENST00000591782 CTC1Q2NKJ3 1217 aa6.81□□□□□ -1.32
VMP1-212ENST00000591782 Q6ZNB5 142 aa6.81□□□□□ -1.32
VMP1-212ENST00000591782 AXIN1O15169 862 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms