RNA–Protein interactions for RNA: ENST00000591595.5

SMARCA4-217, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 3,377 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-217ENST00000591595 PRIMPOLQ96LW4 560 aa14.99□□□□□ -0.01
SMARCA4-217ENST00000591595 DZIP1LQ8IYY4 767 aaKnown RBP14.98□□□□□ -0.01
SMARCA4-217ENST00000591595 MLECQ14165 292 aa14.98□□□□□ -0.01
SMARCA4-217ENST00000591595 EFCC1Q9HA90 598 aa14.98□□□□□ -0.01
SMARCA4-217ENST00000591595 MYOM1P52179 1685 aa14.97□□□□□ -0.01
SMARCA4-217ENST00000591595 ZCCHC11Q5TAX3 1644 aaKnown RBP14.97□□□□□ -0.01
SMARCA4-217ENST00000591595 MVPQ14764 893 aaKnown RBP14.97□□□□□ -0.01
SMARCA4-217ENST00000591595 CARD10Q9BWT7 1032 aa14.97□□□□□ -0.01
SMARCA4-217ENST00000591595 CALCOCO1Q9P1Z2 691 aa14.97□□□□□ -0.01
SMARCA4-217ENST00000591595 ADGRL1O94910 1474 aa14.97□□□□□ -0.01
SMARCA4-217ENST00000591595 EP400NLQ6ZTU2 488 aa14.97□□□□□ -0.01
SMARCA4-217ENST00000591595 TBC1D32Q96NH3 1257 aa14.97□□□□□ -0.01
SMARCA4-217ENST00000591595 CABP2Q9NPB3 220 aa14.97□□□□□ -0.01
SMARCA4-217ENST00000591595 STK26Q9P289 416 aa14.97□□□□□ -0.01
SMARCA4-217ENST00000591595 CEP152O94986 1710 aa14.96□□□□□ -0.01
SMARCA4-217ENST00000591595 ATP7AQ04656 1500 aa14.96□□□□□ -0.01
SMARCA4-217ENST00000591595 FAM177BA6PVY3 158 aa14.96□□□□□ -0.01
SMARCA4-217ENST00000591595 PDLIM2Q96JY6 352 aa14.96□□□□□ -0.01
SMARCA4-217ENST00000591595 SRPK2P78362 688 aaKnown RBP14.96□□□□□ -0.02
SMARCA4-217ENST00000591595 TNNT3P45378 269 aaPredicted RBP14.95□□□□□ -0.02
SMARCA4-217ENST00000591595 EXOSC9Q06265 439 aaKnown RBP14.95□□□□□ -0.02
SMARCA4-217ENST00000591595 FEZ1Q99689 392 aa14.95□□□□□ -0.02
SMARCA4-217ENST00000591595 EVC2Q86UK5 1308 aa14.95□□□□□ -0.02
SMARCA4-217ENST00000591595 SLFN14P0C7P3 912 aa14.95□□□□□ -0.02
SMARCA4-217ENST00000591595 C14orf93Q9H972 538 aaKnown RBP14.95□□□□□ -0.02
SMARCA4-217ENST00000591595 TET3O43151 1660 aa14.95□□□□□ -0.02
SMARCA4-217ENST00000591595 LMOD3Q0VAK6 560 aa14.94□□□□□ -0.02
SMARCA4-217ENST00000591595 BCL2L12Q9HB09 334 aa14.94□□□□□ -0.02
SMARCA4-217ENST00000591595 ZBTB7CA1YPR0 619 aa14.94□□□□□ -0.02
SMARCA4-217ENST00000591595 RBM25P49756 843 aaKnown RBP14.94□□□□□ -0.02
SMARCA4-217ENST00000591595 FAM43BQ6ZT52 329 aaPredicted RBP14.94□□□□□ -0.02
SMARCA4-217ENST00000591595 BANK1Q8NDB2 785 aa14.94□□□□□ -0.02
SMARCA4-217ENST00000591595 GGNBP2Q9H3C7 697 aa14.94□□□□□ -0.02
SMARCA4-217ENST00000591595 GBP4Q96PP9 640 aa14.94□□□□□ -0.02
SMARCA4-217ENST00000591595 OGFRQ9NZT2 677 aa14.94□□□□□ -0.02
SMARCA4-217ENST00000591595 MAP3K4Q9Y6R4 1608 aa14.94□□□□□ -0.02
SMARCA4-217ENST00000591595 SBNO2Q9Y2G9 1366 aa14.93□□□□□ -0.02
SMARCA4-217ENST00000591595 MYOM2P54296 1465 aa14.93□□□□□ -0.02
SMARCA4-217ENST00000591595 ABCA6Q8N139 1617 aa14.93□□□□□ -0.02
SMARCA4-217ENST00000591595 PHF14O94880 888 aa14.93□□□□□ -0.02
SMARCA4-217ENST00000591595 C22orf23Q9BZE7 217 aa14.93□□□□□ -0.02
SMARCA4-217ENST00000591595 SHROOM2Q13796 1616 aa14.92□□□□□ -0.02
SMARCA4-217ENST00000591595 CCDC27Q2M243 656 aa14.92□□□□□ -0.02
SMARCA4-217ENST00000591595 CCDC39Q9UFE4 941 aa14.92□□□□□ -0.02
SMARCA4-217ENST00000591595 FEZ2Q9UHY8 353 aaPredicted RBP14.92□□□□□ -0.02
SMARCA4-217ENST00000591595 KIAA2012Q0VF49 1180 aa14.91□□□□□ -0.02
SMARCA4-217ENST00000591595 TRERF1Q96PN7 1200 aa14.91□□□□□ -0.02
SMARCA4-217ENST00000591595 IBTKQ9P2D0 1353 aaPredicted RBP14.91□□□□□ -0.02
SMARCA4-217ENST00000591595 TRIM27P14373 513 aa14.91□□□□□ -0.02
SMARCA4-217ENST00000591595 PHF23Q9BUL5 403 aaPredicted RBP14.91□□□□□ -0.02
SMARCA4-217ENST00000591595 EGFL6Q8IUX8 553 aa14.9□□□□□ -0.02
SMARCA4-217ENST00000591595 SSH1Q8WYL5 1049 aa14.9□□□□□ -0.02
SMARCA4-217ENST00000591595 TNPO1Q92973 898 aaKnown RBP14.9□□□□□ -0.02
SMARCA4-217ENST00000591595 DDX19BQ9UMR2 479 aa14.9□□□□□ -0.02
SMARCA4-217ENST00000591595 NPM1P06748 294 aaKnown RBP eCLIP14.9□□□□□ -0.02
SMARCA4-217ENST00000591595 SIRT1Q96EB6 747 aa14.9□□□□□ -0.02
SMARCA4-217ENST00000591595 HSCBQ8IWL3 235 aa14.9□□□□□ -0.02
SMARCA4-217ENST00000591595 UHRF1BP1LA0JNW5 1464 aa14.89□□□□□ -0.03
SMARCA4-217ENST00000591595 ZNF692Q9BU19 519 aaPredicted RBP14.89□□□□□ -0.03
SMARCA4-217ENST00000591595 TMPOP42166 694 aaKnown RBP14.89□□□□□ -0.03
SMARCA4-217ENST00000591595 MYCBPQ99417 103 aaPredicted RBP14.89□□□□□ -0.03
SMARCA4-217ENST00000591595 NOB1Q9ULX3 412 aaKnown RBP14.89□□□□□ -0.03
SMARCA4-217ENST00000591595 GTF3C5Q9Y5Q8 519 aaPredicted RBP14.89□□□□□ -0.03
SMARCA4-217ENST00000591595 HSP90AB1P08238 724 aaKnown RBP14.88□□□□□ -0.03
SMARCA4-217ENST00000591595 ATF7IPQ6VMQ6 1270 aa14.88□□□□□ -0.03
SMARCA4-217ENST00000591595 GTF2A1P52655 376 aaPredicted RBP14.88□□□□□ -0.03
SMARCA4-217ENST00000591595 TICAM2Q86XR7 235 aa14.88□□□□□ -0.03
SMARCA4-217ENST00000591595 ERICH4A6NGS2 130 aa14.88□□□□□ -0.03
SMARCA4-217ENST00000591595 FBXO3Q9UK99 471 aa14.88□□□□□ -0.03
SMARCA4-217ENST00000591595 TERF2Q15554 542 aa14.87□□□□□ -0.03
SMARCA4-217ENST00000591595 KIAA1210Q9ULL0 1709 aa14.87□□□□□ -0.03
SMARCA4-217ENST00000591595 ZNF518AQ6AHZ1 1483 aa14.87□□□□□ -0.03
SMARCA4-217ENST00000591595 CFAP65Q6ZU64 1925 aaKnown RBP14.87□□□□□ -0.03
SMARCA4-217ENST00000591595 CT47A1Q5JQC4 288 aaPredicted RBP14.87□□□□□ -0.03
SMARCA4-217ENST00000591595 LNPKQ9C0E8 428 aa14.87□□□□□ -0.03
SMARCA4-217ENST00000591595 MCCP23508 829 aa14.87□□□□□ -0.03
SMARCA4-217ENST00000591595 TMEM57Q8N5G2 664 aa14.87□□□□□ -0.03
SMARCA4-217ENST00000591595 CCDC9Q9Y3X0 531 aaKnown RBP14.87□□□□□ -0.03
SMARCA4-217ENST00000591595 MINK1Q8N4C8 1332 aaPredicted RBP14.86□□□□□ -0.03
SMARCA4-217ENST00000591595 IPO8O15397 1037 aaKnown RBP14.86□□□□□ -0.03
SMARCA4-217ENST00000591595 RSPH14Q9UHP6 348 aa14.86□□□□□ -0.03
SMARCA4-217ENST00000591595 KIF1BO60333 1816 aa14.86□□□□□ -0.03
SMARCA4-217ENST00000591595 ANKRD36BQ8N2N9 1353 aa14.86□□□□□ -0.03
SMARCA4-217ENST00000591595 DEPDC5O75140 1603 aa14.86□□□□□ -0.03
SMARCA4-217ENST00000591595 CT47B1P0C2W7 299 aaPredicted RBP14.85□□□□□ -0.03
SMARCA4-217ENST00000591595 ANKRD7Q92527 254 aa14.85□□□□□ -0.03
SMARCA4-217ENST00000591595 TRHP20396 242 aaPredicted RBP14.85□□□□□ -0.03
SMARCA4-217ENST00000591595 NCAPGQ9BPX3 1015 aa14.85□□□□□ -0.03
SMARCA4-217ENST00000591595 EFCAB6Q5THR3 1501 aa14.84□□□□□ -0.03
SMARCA4-217ENST00000591595 CEP83Q9Y592 693 aa14.84□□□□□ -0.03
SMARCA4-217ENST00000591595 RPGRIP1LQ68CZ1 1315 aa14.84□□□□□ -0.03
SMARCA4-217ENST00000591595 TERF2IPQ9NYB0 399 aa14.84□□□□□ -0.03
SMARCA4-217ENST00000591595 DDX49Q9Y6V7 483 aaKnown RBP14.84□□□□□ -0.03
SMARCA4-217ENST00000591595 BRPF1P55201 1214 aaPredicted RBP14.84□□□□□ -0.03
SMARCA4-217ENST00000591595 NPATQ14207 1427 aa14.84□□□□□ -0.03
SMARCA4-217ENST00000591595 IQSEC2Q5JU85 1478 aa14.84□□□□□ -0.03
SMARCA4-217ENST00000591595 VWDEQ8N2E2 1590 aa14.84□□□□□ -0.03
SMARCA4-217ENST00000591595 ARAP3Q8WWN8 1544 aa14.84□□□□□ -0.03
SMARCA4-217ENST00000591595 RBSNQ9H1K0 784 aa14.84□□□□□ -0.03
SMARCA4-217ENST00000591595 DIAPH1O60610 1272 aaKnown RBP14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms