RNA–Protein interactions for RNA: ENST00000591383.1

VPS4B-205, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

TSL 5

Gene VPS4B, Length 701 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-205ENST00000591383 KIF1AQ12756 1690 aa9.01□□□□□ -0.97
VPS4B-205ENST00000591383 MST1RQ04912 1400 aa9.01□□□□□ -0.97
VPS4B-205ENST00000591383 PDE4DQ08499 809 aa9.01□□□□□ -0.97
VPS4B-205ENST00000591383 PIP4K2BP78356 416 aa9□□□□□ -0.97
VPS4B-205ENST00000591383 ATP7BP35670 1465 aa9□□□□□ -0.97
VPS4B-205ENST00000591383 NHSL1Q5SYE7 1610 aa8.99□□□□□ -0.97
VPS4B-205ENST00000591383 NUTM2FA1L443 756 aa8.99□□□□□ -0.97
VPS4B-205ENST00000591383 DPY19L2Q6NUT2 758 aa8.99□□□□□ -0.97
VPS4B-205ENST00000591383 PHLPP1O60346 1717 aa8.99□□□□□ -0.97
VPS4B-205ENST00000591383 C1orf167Q5SNV9 1468 aa8.98□□□□□ -0.97
VPS4B-205ENST00000591383 GPR37O15354 613 aa8.98□□□□□ -0.97
VPS4B-205ENST00000591383 TOM1O60784 492 aa8.98□□□□□ -0.97
VPS4B-205ENST00000591383 FOXK1P85037 733 aa8.98□□□□□ -0.97
VPS4B-205ENST00000591383 C19orf44Q9H6X5 657 aa8.98□□□□□ -0.97
VPS4B-205ENST00000591383 SBNO2Q9Y2G9 1366 aa8.98□□□□□ -0.97
VPS4B-205ENST00000591383 ANKARQ7Z5J8 1434 aa8.97□□□□□ -0.97
VPS4B-205ENST00000591383 MICALL2Q8IY33 904 aa8.97□□□□□ -0.97
VPS4B-205ENST00000591383 SIRT1Q96EB6 747 aa8.97□□□□□ -0.97
VPS4B-205ENST00000591383 BMP2KQ9NSY1 1161 aaPredicted RBP8.97□□□□□ -0.97
VPS4B-205ENST00000591383 AHDC1Q5TGY3 1603 aaPredicted RBP8.96□□□□□ -0.98
VPS4B-205ENST00000591383 ST20-MTHFSA0A0A6YYL1 179 aa8.96□□□□□ -0.98
VPS4B-205ENST00000591383 C19orf67A6NJJ6 358 aa8.96□□□□□ -0.98
VPS4B-205ENST00000591383 ZEB1P37275 1124 aaPredicted RBP8.96□□□□□ -0.98
VPS4B-205ENST00000591383 SRPK2P78362 688 aaKnown RBP8.96□□□□□ -0.98
VPS4B-205ENST00000591383 TMC2Q8TDI7 906 aa8.96□□□□□ -0.98
VPS4B-205ENST00000591383 MYOM1P52179 1685 aa8.96□□□□□ -0.98
VPS4B-205ENST00000591383 EVC2Q86UK5 1308 aa8.96□□□□□ -0.98
VPS4B-205ENST00000591383 DISP3Q9P2K9 1392 aa8.96□□□□□ -0.98
VPS4B-205ENST00000591383 COL16A1Q07092 1604 aaPredicted RBP8.95□□□□□ -0.98
VPS4B-205ENST00000591383 WASLO00401 505 aaPredicted RBP8.95□□□□□ -0.98
VPS4B-205ENST00000591383 HSPA5P11021 654 aaKnown RBP8.95□□□□□ -0.98
VPS4B-205ENST00000591383 EIF4G2P78344 907 aaKnown RBP eCLIP8.95□□□□□ -0.98
VPS4B-205ENST00000591383 TRIM35Q9UPQ4 493 aa8.95□□□□□ -0.98
VPS4B-205ENST00000591383 POLR3GLQ9BT43 218 aa8.94□□□□□ -0.98
VPS4B-205ENST00000591383 CDK19Q9BWU1 502 aa8.94□□□□□ -0.98
VPS4B-205ENST00000591383 SLAIN2Q9P270 581 aa8.94□□□□□ -0.98
VPS4B-205ENST00000591383 PRR36Q9H6K5 1346 aa8.94□□□□□ -0.98
VPS4B-205ENST00000591383 PPIP5K1Q6PFW1 1433 aa8.94□□□□□ -0.98
VPS4B-205ENST00000591383 AKAP12Q02952 1782 aa8.94□□□□□ -0.98
VPS4B-205ENST00000591383 ESCO1Q5FWF5 840 aa8.93□□□□□ -0.98
VPS4B-205ENST00000591383 BRINP3Q76B58 766 aa8.93□□□□□ -0.98
VPS4B-205ENST00000591383 PLPP6Q8IY26 295 aa8.93□□□□□ -0.98
VPS4B-205ENST00000591383 FBXO41Q8TF61 875 aa8.93□□□□□ -0.98
VPS4B-205ENST00000591383 ZMYND15Q9H091 742 aa8.93□□□□□ -0.98
VPS4B-205ENST00000591383 ATAD2Q6PL18 1390 aa8.93□□□□□ -0.98
VPS4B-205ENST00000591383 NRKQ7Z2Y5 1582 aa8.93□□□□□ -0.98
VPS4B-205ENST00000591383 MON2Q7Z3U7 1717 aa8.92□□□□□ -0.98
VPS4B-205ENST00000591383 TMF1P82094 1093 aa8.92□□□□□ -0.98
VPS4B-205ENST00000591383 PDCD7Q8N8D1 485 aaKnown RBP8.92□□□□□ -0.98
VPS4B-205ENST00000591383 TESK2Q96S53 571 aa8.92□□□□□ -0.98
VPS4B-205ENST00000591383 FAM117AQ9C073 453 aa8.92□□□□□ -0.98
VPS4B-205ENST00000591383 TRPM3Q9HCF6 1732 aaPredicted RBP8.91□□□□□ -0.98
VPS4B-205ENST00000591383 PXDNQ92626 1479 aa8.91□□□□□ -0.98
VPS4B-205ENST00000591383 GRXCR2A6NFK2 248 aa8.91□□□□□ -0.98
VPS4B-205ENST00000591383 NUDT16Q96DE0 195 aaKnown RBP8.91□□□□□ -0.98
VPS4B-205ENST00000591383 ORAI2Q96SN7 254 aa8.91□□□□□ -0.98
VPS4B-205ENST00000591383 SHPRHQ149N8 1683 aa8.91□□□□□ -0.98
VPS4B-205ENST00000591383 XPCQ01831 940 aaPredicted RBP8.9□□□□□ -0.98
VPS4B-205ENST00000591383 PMFBP1Q8TBY8 1022 aa8.9□□□□□ -0.98
VPS4B-205ENST00000591383 DDX17Q92841 729 aaKnown RBP8.9□□□□□ -0.98
VPS4B-205ENST00000591383 TMEM121BQ9BXQ6 578 aaPredicted RBP8.9□□□□□ -0.98
VPS4B-205ENST00000591383 ABCA3Q99758 1704 aa8.9□□□□□ -0.98
VPS4B-205ENST00000591383 KIF20BQ96Q89 1820 aa8.89□□□□□ -0.99
VPS4B-205ENST00000591383 NPHP3Q7Z494 1330 aa8.89□□□□□ -0.99
VPS4B-205ENST00000591383 C2orf72A6NCS6 295 aa8.89□□□□□ -0.99
VPS4B-205ENST00000591383 KIF3CO14782 793 aa8.89□□□□□ -0.99
VPS4B-205ENST00000591383 HSPA1LP34931 641 aa8.89□□□□□ -0.99
VPS4B-205ENST00000591383 MAP3K9P80192 1104 aa8.89□□□□□ -0.99
VPS4B-205ENST00000591383 MAP2K5Q13163 448 aa8.89□□□□□ -0.99
VPS4B-205ENST00000591383 NGDNQ8NEJ9 315 aaKnown RBP8.89□□□□□ -0.99
VPS4B-205ENST00000591383 TMC1Q8TDI8 760 aa8.89□□□□□ -0.99
VPS4B-205ENST00000591383 CCDC102AQ96A19 550 aa8.89□□□□□ -0.99
VPS4B-205ENST00000591383 TNS3Q68CZ2 1445 aa8.88□□□□□ -0.99
VPS4B-205ENST00000591383 ALS2Q96Q42 1657 aa8.88□□□□□ -0.99
VPS4B-205ENST00000591383 ZNF316A6NFI3 1004 aaPredicted RBP8.88□□□□□ -0.99
VPS4B-205ENST00000591383 IRF6O14896 467 aa8.88□□□□□ -0.99
VPS4B-205ENST00000591383 GALR2O43603 387 aaPredicted RBP8.88□□□□□ -0.99
VPS4B-205ENST00000591383 PIK3C2AO00443 1686 aa8.88□□□□□ -0.99
VPS4B-205ENST00000591383 PHRF1Q9P1Y6 1649 aaKnown RBP8.87□□□□□ -0.99
VPS4B-205ENST00000591383 NINLQ9Y2I6 1382 aa8.87□□□□□ -0.99
VPS4B-205ENST00000591383 PLEKHG3A1L390 1219 aa8.87□□□□□ -0.99
VPS4B-205ENST00000591383 FOXO3O43524 673 aa8.87□□□□□ -0.99
VPS4B-205ENST00000591383 OSBPP22059 807 aa8.87□□□□□ -0.99
VPS4B-205ENST00000591383 CDCA8Q53HL2 280 aa8.87□□□□□ -0.99
VPS4B-205ENST00000591383 RSPH6AQ9H0K4 717 aa8.87□□□□□ -0.99
VPS4B-205ENST00000591383 BOLA1Q9Y3E2 137 aa8.87□□□□□ -0.99
VPS4B-205ENST00000591383 USP6P35125 1406 aa8.87□□□□□ -0.99
VPS4B-205ENST00000591383 COL22A1Q8NFW1 1626 aaPredicted RBP8.87□□□□□ -0.99
VPS4B-205ENST00000591383 A0A1W2PP64 1363 aa8.86□□□□□ -0.99
VPS4B-205ENST00000591383 POLR3AO14802 1390 aaPredicted RBP8.86□□□□□ -0.99
VPS4B-205ENST00000591383 MED1Q15648 1581 aaPredicted RBP8.86□□□□□ -0.99
VPS4B-205ENST00000591383 ACEP12821 1306 aa8.86□□□□□ -0.99
VPS4B-205ENST00000591383 CD163L1Q9NR16 1453 aa8.86□□□□□ -0.99
VPS4B-205ENST00000591383 AMHR2Q16671 573 aa8.86□□□□□ -0.99
VPS4B-205ENST00000591383 CABP1Q9NZU7 370 aa8.86□□□□□ -0.99
VPS4B-205ENST00000591383 KTN1Q86UP2 1357 aaKnown RBP8.86□□□□□ -0.99
VPS4B-205ENST00000591383 CRYBG1Q9Y4K1 1723 aa8.85□□□□□ -0.99
VPS4B-205ENST00000591383 KIF7Q2M1P5 1343 aa8.85□□□□□ -0.99
VPS4B-205ENST00000591383 GNPATO15228 680 aa8.85□□□□□ -0.99
VPS4B-205ENST00000591383 IRX5P78411 483 aaPredicted RBP8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms