RNA–Protein interactions for RNA: ENST00000589760.1

RFX1-206, Transcript of regulatory factor X1, humanhuman

TSL 5

Gene RFX1, Length 848 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1-206ENST00000589760 PCDHB13Q9Y5F0 798 aa20.33■□□□□ 0.85
RFX1-206ENST00000589760 PHRF1Q9P1Y6 1649 aaKnown RBP20.33■□□□□ 0.84
RFX1-206ENST00000589760 PDAP1Q13442 181 aaKnown RBP20.32■□□□□ 0.84
RFX1-206ENST00000589760 NGLY1Q96IV0 654 aa20.32■□□□□ 0.84
RFX1-206ENST00000589760 PUS7Q96PZ0 661 aaKnown RBP20.32■□□□□ 0.84
RFX1-206ENST00000589760 BRD4O60885 1362 aaPredicted RBP20.32■□□□□ 0.84
RFX1-206ENST00000589760 AFF2P51816 1311 aa20.31■□□□□ 0.84
RFX1-206ENST00000589760 CABLES1Q8TDN4 633 aa20.31■□□□□ 0.84
RFX1-206ENST00000589760 TNKS1BP1Q9C0C2 1729 aaKnown RBP20.3■□□□□ 0.84
RFX1-206ENST00000589760 USP6P35125 1406 aa20.3■□□□□ 0.84
RFX1-206ENST00000589760 PLCH1Q4KWH8 1693 aa20.3■□□□□ 0.84
RFX1-206ENST00000589760 POTEAQ6S8J7 498 aa20.3■□□□□ 0.84
RFX1-206ENST00000589760 KIF12Q96FN5 646 aa20.3■□□□□ 0.84
RFX1-206ENST00000589760 NWD2Q9ULI1 1742 aa20.3■□□□□ 0.84
RFX1-206ENST00000589760 NRKQ7Z2Y5 1582 aa20.29■□□□□ 0.84
RFX1-206ENST00000589760 TMF1P82094 1093 aa20.28■□□□□ 0.84
RFX1-206ENST00000589760 NKX1-1Q15270 411 aaPredicted RBP20.28■□□□□ 0.84
RFX1-206ENST00000589760 ABTB2Q8N961 1025 aa20.27■□□□□ 0.84
RFX1-206ENST00000589760 TMC1Q8TDI8 760 aa20.27■□□□□ 0.84
RFX1-206ENST00000589760 CPSF1Q10570 1443 aaKnown RBP20.27■□□□□ 0.83
RFX1-206ENST00000589760 PIK3C2AO00443 1686 aa20.26■□□□□ 0.83
RFX1-206ENST00000589760 MAP3K13O43283 966 aa20.26■□□□□ 0.83
RFX1-206ENST00000589760 FNBP4Q8N3X1 1017 aaPredicted RBP20.26■□□□□ 0.83
RFX1-206ENST00000589760 COL14A1Q05707 1796 aaKnown RBP20.26■□□□□ 0.83
RFX1-206ENST00000589760 USP21Q9UK80 565 aa20.25■□□□□ 0.83
RFX1-206ENST00000589760 SSH2Q76I76 1423 aa20.25■□□□□ 0.83
RFX1-206ENST00000589760 KTN1Q86UP2 1357 aaKnown RBP20.24■□□□□ 0.83
RFX1-206ENST00000589760 NUTM2GQ5VZR2 741 aa20.24■□□□□ 0.83
RFX1-206ENST00000589760 VSIG10Q8N0Z9 540 aa20.24■□□□□ 0.83
RFX1-206ENST00000589760 NINLQ9Y2I6 1382 aa20.23■□□□□ 0.83
RFX1-206ENST00000589760 EIF4G2P78344 907 aaKnown RBP eCLIP20.23■□□□□ 0.83
RFX1-206ENST00000589760 CDCA8Q53HL2 280 aa20.23■□□□□ 0.83
RFX1-206ENST00000589760 NLRP13Q86W25 1043 aa20.23■□□□□ 0.83
RFX1-206ENST00000589760 SLC12A5Q9H2X9 1139 aa20.23■□□□□ 0.83
RFX1-206ENST00000589760 CD163L1Q9NR16 1453 aa20.23■□□□□ 0.83
RFX1-206ENST00000589760 HDGFL2Q7Z4V5 671 aaPredicted RBP20.22■□□□□ 0.83
RFX1-206ENST00000589760 IFNL1Q8IU54 200 aa20.22■□□□□ 0.83
RFX1-206ENST00000589760 QTRT2Q9H974 415 aaKnown RBP20.22■□□□□ 0.83
RFX1-206ENST00000589760 SLIT2O94813 1529 aa20.22■□□□□ 0.83
RFX1-206ENST00000589760 C19orf67A6NJJ6 358 aa20.21■□□□□ 0.83
RFX1-206ENST00000589760 PSEN1P49768 467 aa20.21■□□□□ 0.83
RFX1-206ENST00000589760 MYOM1P52179 1685 aa20.21■□□□□ 0.83
RFX1-206ENST00000589760 NRAPQ86VF7 1730 aa20.21■□□□□ 0.83
RFX1-206ENST00000589760 TTC21BQ7Z4L5 1316 aa20.21■□□□□ 0.83
RFX1-206ENST00000589760 TTC21AQ8NDW8 1320 aa20.21■□□□□ 0.83
RFX1-206ENST00000589760 BCL9LQ86UU0 1499 aa20.2■□□□□ 0.82
RFX1-206ENST00000589760 RXRBP28702 533 aa20.2■□□□□ 0.82
RFX1-206ENST00000589760 TERF2IPQ9NYB0 399 aa20.2■□□□□ 0.82
RFX1-206ENST00000589760 TRPC5Q9UL62 973 aaPredicted RBP20.2■□□□□ 0.82
RFX1-206ENST00000589760 USP54Q70EL1 1684 aa20.19■□□□□ 0.82
RFX1-206ENST00000589760 HSPA5P11021 654 aaKnown RBP20.18■□□□□ 0.82
RFX1-206ENST00000589760 NLRP6P59044 892 aa20.18■□□□□ 0.82
RFX1-206ENST00000589760 PHF12Q96QT6 1004 aa20.18■□□□□ 0.82
RFX1-206ENST00000589760 USP19O94966 1318 aa20.18■□□□□ 0.82
RFX1-206ENST00000589760 A0A1W2PP64 1363 aa20.18■□□□□ 0.82
RFX1-206ENST00000589760 FAM83GA6ND36 823 aa20.17■□□□□ 0.82
RFX1-206ENST00000589760 RBM6P78332 1123 aaKnown RBP20.17■□□□□ 0.82
RFX1-206ENST00000589760 UNC5CLQ8IV45 518 aa20.17■□□□□ 0.82
RFX1-206ENST00000589760 ATRNO75882 1429 aa20.17■□□□□ 0.82
RFX1-206ENST00000589760 SLIT3O75094 1523 aa20.17■□□□□ 0.82
RFX1-206ENST00000589760 RYDENQ9NUL5 291 aaKnown RBP20.16■□□□□ 0.82
RFX1-206ENST00000589760 EDC4Q6P2E9 1401 aaKnown RBP20.16■□□□□ 0.82
RFX1-206ENST00000589760 RGPD5Q99666 1765 aa20.16■□□□□ 0.82
RFX1-206ENST00000589760 GTPBP6O43824 516 aaPredicted RBP20.15■□□□□ 0.82
RFX1-206ENST00000589760 PRDM11Q9NQV5 511 aa20.15■□□□□ 0.82
RFX1-206ENST00000589760 CDK12Q9NYV4 1490 aaPredicted RBP20.15■□□□□ 0.82
RFX1-206ENST00000589760 KIF20BQ96Q89 1820 aa20.15■□□□□ 0.82
RFX1-206ENST00000589760 ANKRD36BQ8N2N9 1353 aa20.14■□□□□ 0.81
RFX1-206ENST00000589760 KIAA0232Q92628 1395 aa20.14■□□□□ 0.81
RFX1-206ENST00000589760 SOCS7O14512 581 aa20.14■□□□□ 0.81
RFX1-206ENST00000589760 GCP02774 474 aa20.14■□□□□ 0.81
RFX1-206ENST00000589760 ZC3H6P61129 1189 aaKnown RBP20.14■□□□□ 0.81
RFX1-206ENST00000589760 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.14■□□□□ 0.81
RFX1-206ENST00000589760 LTN1O94822 1766 aa20.13■□□□□ 0.81
RFX1-206ENST00000589760 TSHZ2Q9NRE2 1034 aa20.13■□□□□ 0.81
RFX1-206ENST00000589760 BTG4Q9NY30 223 aa20.12■□□□□ 0.81
RFX1-206ENST00000589760 LMO7Q8WWI1 1683 aa20.12■□□□□ 0.81
RFX1-206ENST00000589760 CPDO75976 1380 aa20.11■□□□□ 0.81
RFX1-206ENST00000589760 GLI3P10071 1580 aa20.11■□□□□ 0.81
RFX1-206ENST00000589760 COL18A1P39060 1754 aa20.11■□□□□ 0.81
RFX1-206ENST00000589760 USP31Q70CQ4 1352 aa20.1■□□□□ 0.81
RFX1-206ENST00000589760 CHRNA2Q15822 529 aa20.1■□□□□ 0.81
RFX1-206ENST00000589760 KCNH5Q8NCM2 988 aa20.1■□□□□ 0.81
RFX1-206ENST00000589760 GJD4Q96KN9 370 aaPredicted RBP20.1■□□□□ 0.81
RFX1-206ENST00000589760 BRWD3Q6RI45 1802 aa20.09■□□□□ 0.81
RFX1-206ENST00000589760 VPS72Q15906 364 aa20.09■□□□□ 0.81
RFX1-206ENST00000589760 NME9Q86XW9 330 aa20.09■□□□□ 0.81
RFX1-206ENST00000589760 POLR3GLQ9BT43 218 aa20.08■□□□□ 0.81
RFX1-206ENST00000589760 RGS12O14924 1447 aa20.08■□□□□ 0.8
RFX1-206ENST00000589760 CCDC9Q9Y3X0 531 aaKnown RBP20.07■□□□□ 0.8
RFX1-206ENST00000589760 CAMTA1Q9Y6Y1 1673 aa20.07■□□□□ 0.8
RFX1-206ENST00000589760 NFAT5O94916 1531 aa20.06■□□□□ 0.8
RFX1-206ENST00000589760 ZBTB7CA1YPR0 619 aa20.05■□□□□ 0.8
RFX1-206ENST00000589760 OVOS2A0A0J9YW53 1432 aa20.04■□□□□ 0.8
RFX1-206ENST00000589760 OVOS2Q6IE36 1432 aa20.04■□□□□ 0.8
RFX1-206ENST00000589760 SOX12O15370 315 aa20.04■□□□□ 0.8
RFX1-206ENST00000589760 EVA1CP58658 441 aa20.03■□□□□ 0.8
RFX1-206ENST00000589760 STRN4Q9NRL3 753 aa20.03■□□□□ 0.8
RFX1-206ENST00000589760 ANKRD26Q9UPS8 1709 aa20.02■□□□□ 0.8
RFX1-206ENST00000589760 AATKQ6ZMQ8 1374 aa20.02■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms