RNA–Protein interactions for RNA: ENST00000589447.1

LINC01539-203, Transcript of long intergenic non-protein coding RNA 1539, humanhuman

TSL 4

Gene LINC01539, Length 575 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01539-203ENST00000589447 MCM6Q14566 821 aa4.34□□□□□ -1.71
LINC01539-203ENST00000589447 DOK7Q18PE1 504 aa4.34□□□□□ -1.71
LINC01539-203ENST00000589447 GLIPR1L2Q4G1C9 344 aa4.34□□□□□ -1.71
LINC01539-203ENST00000589447 NLRP13Q86W25 1043 aa4.34□□□□□ -1.71
LINC01539-203ENST00000589447 EXOC6Q8TAG9 804 aa4.34□□□□□ -1.71
LINC01539-203ENST00000589447 POLR3GLQ9BT43 218 aa4.34□□□□□ -1.71
LINC01539-203ENST00000589447 IGSF5Q9NSI5 407 aa4.34□□□□□ -1.71
LINC01539-203ENST00000589447 PARD3Q8TEW0 1356 aa4.34□□□□□ -1.71
LINC01539-203ENST00000589447 ANKRD30AQ9BXX3 1397 aa4.34□□□□□ -1.71
LINC01539-203ENST00000589447 SYNMO15061 1565 aa4.33□□□□□ -1.72
LINC01539-203ENST00000589447 ARHGEF5Q12774 1597 aa4.33□□□□□ -1.72
LINC01539-203ENST00000589447 RIMBP2O15034 1052 aa4.33□□□□□ -1.72
LINC01539-203ENST00000589447 NFKBIBQ15653 356 aa4.33□□□□□ -1.72
LINC01539-203ENST00000589447 FAM161AQ3B820 660 aa4.33□□□□□ -1.72
LINC01539-203ENST00000589447 L1TD1Q5T7N2 865 aaKnown RBP4.33□□□□□ -1.72
LINC01539-203ENST00000589447 ILDR2Q71H61 639 aa4.33□□□□□ -1.72
LINC01539-203ENST00000589447 CENPQQ7L2Z9 268 aaPredicted RBP4.33□□□□□ -1.72
LINC01539-203ENST00000589447 AFAP1Q8N556 730 aa4.33□□□□□ -1.72
LINC01539-203ENST00000589447 GOLGA6L2Q8N9W4 650 aaPredicted RBP4.33□□□□□ -1.72
LINC01539-203ENST00000589447 FBXO22Q8NEZ5 403 aa4.33□□□□□ -1.72
LINC01539-203ENST00000589447 MS4A4AQ96JQ5 239 aa4.33□□□□□ -1.72
LINC01539-203ENST00000589447 ZSWIM6Q9HCJ5 1215 aa4.33□□□□□ -1.72
LINC01539-203ENST00000589447 PIK3C2BO00750 1634 aa4.32□□□□□ -1.72
LINC01539-203ENST00000589447 MAST1Q9Y2H9 1570 aa4.32□□□□□ -1.72
LINC01539-203ENST00000589447 PRDM15P57071 1507 aaPredicted RBP4.32□□□□□ -1.72
LINC01539-203ENST00000589447 CCDC144AA2RUR9 1427 aa4.32□□□□□ -1.72
LINC01539-203ENST00000589447 DPY19L2Q6NUT2 758 aa4.32□□□□□ -1.72
LINC01539-203ENST00000589447 CARD11Q9BXL7 1154 aa4.32□□□□□ -1.72
LINC01539-203ENST00000589447 MFRPQ9BY79 579 aa4.32□□□□□ -1.72
LINC01539-203ENST00000589447 PHF8Q9UPP1 1060 aa4.32□□□□□ -1.72
LINC01539-203ENST00000589447 UNC13BO14795 1591 aa4.31□□□□□ -1.72
LINC01539-203ENST00000589447 ABCC3O15438 1527 aa4.31□□□□□ -1.72
LINC01539-203ENST00000589447 A2MP01023 1474 aa4.31□□□□□ -1.72
LINC01539-203ENST00000589447 NINLQ9Y2I6 1382 aa4.31□□□□□ -1.72
LINC01539-203ENST00000589447 BECN1Q14457 450 aa4.31□□□□□ -1.72
LINC01539-203ENST00000589447 AMHR2Q16671 573 aa4.31□□□□□ -1.72
LINC01539-203ENST00000589447 CCDC27Q2M243 656 aa4.31□□□□□ -1.72
LINC01539-203ENST00000589447 ZNF326Q5BKZ1 582 aaKnown RBP4.31□□□□□ -1.72
LINC01539-203ENST00000589447 FRAT1Q92837 279 aaPredicted RBP4.31□□□□□ -1.72
LINC01539-203ENST00000589447 BRPF3Q9ULD4 1205 aa4.31□□□□□ -1.72
LINC01539-203ENST00000589447 PLA2R1Q13018 1463 aa4.3□□□□□ -1.72
LINC01539-203ENST00000589447 PTPRTO14522 1441 aa4.3□□□□□ -1.72
LINC01539-203ENST00000589447 NPATQ14207 1427 aa4.3□□□□□ -1.72
LINC01539-203ENST00000589447 ANKRD50Q9ULJ7 1429 aa4.3□□□□□ -1.72
LINC01539-203ENST00000589447 MINK1Q8N4C8 1332 aaPredicted RBP4.3□□□□□ -1.72
LINC01539-203ENST00000589447 EMP3P54852 163 aa4.3□□□□□ -1.72
LINC01539-203ENST00000589447 PCMTD1Q96MG8 357 aaPredicted RBP4.3□□□□□ -1.72
LINC01539-203ENST00000589447 CRBNQ96SW2 442 aa4.3□□□□□ -1.72
LINC01539-203ENST00000589447 USTQ9Y2C2 406 aa4.3□□□□□ -1.72
LINC01539-203ENST00000589447 UGGT1Q9NYU2 1555 aa4.3□□□□□ -1.72
LINC01539-203ENST00000589447 IQSEC2Q5JU85 1478 aa4.3□□□□□ -1.72
LINC01539-203ENST00000589447 ZMYM3Q14202 1370 aa4.29□□□□□ -1.72
LINC01539-203ENST00000589447 KDM5AP29375 1690 aaKnown RBP4.29□□□□□ -1.72
LINC01539-203ENST00000589447 IQGAP3Q86VI3 1631 aa4.29□□□□□ -1.72
LINC01539-203ENST00000589447 KDM2BQ8NHM5 1336 aa4.29□□□□□ -1.72
LINC01539-203ENST00000589447 ZNF644Q9H582 1327 aaPredicted RBP4.29□□□□□ -1.72
LINC01539-203ENST00000589447 PLEKHD1A6NEE1 506 aa4.29□□□□□ -1.72
LINC01539-203ENST00000589447 HOXB3P14651 431 aaPredicted RBP4.29□□□□□ -1.72
LINC01539-203ENST00000589447 CNGB1Q14028 1251 aaPredicted RBP4.29□□□□□ -1.72
LINC01539-203ENST00000589447 RBM26Q5T8P6 1007 aaKnown RBP4.29□□□□□ -1.72
LINC01539-203ENST00000589447 ZNF710Q8N1W2 664 aa4.29□□□□□ -1.72
LINC01539-203ENST00000589447 CERKQ8TCT0 537 aa4.29□□□□□ -1.72
LINC01539-203ENST00000589447 FAM135AQ9P2D6 1515 aa4.29□□□□□ -1.72
LINC01539-203ENST00000589447 A2ML1A8K2U0 1454 aa4.29□□□□□ -1.72
LINC01539-203ENST00000589447 CCDC141Q6ZP82 1450 aa4.29□□□□□ -1.72
LINC01539-203ENST00000589447 PRAG1Q86YV5 1406 aa4.29□□□□□ -1.72
LINC01539-203ENST00000589447 GPRASP1Q5JY77 1395 aa4.28□□□□□ -1.72
LINC01539-203ENST00000589447 ZNF335Q9H4Z2 1342 aaPredicted RBP4.28□□□□□ -1.72
LINC01539-203ENST00000589447 MAPK8IP3Q9UPT6 1336 aa4.28□□□□□ -1.72
LINC01539-203ENST00000589447 HOXB1P14653 301 aaPredicted RBP4.28□□□□□ -1.72
LINC01539-203ENST00000589447 C8orf34Q49A92 452 aa4.28□□□□□ -1.72
LINC01539-203ENST00000589447 CDAN1Q8IWY9 1227 aa4.28□□□□□ -1.72
LINC01539-203ENST00000589447 DHX37Q8IY37 1157 aaKnown RBP4.28□□□□□ -1.72
LINC01539-203ENST00000589447 UPF2Q9HAU5 1272 aaKnown RBP4.28□□□□□ -1.72
LINC01539-203ENST00000589447 CFDP1Q9UEE9 299 aaPredicted RBP4.28□□□□□ -1.72
LINC01539-203ENST00000589447 SPHKAPQ2M3C7 1700 aa4.28□□□□□ -1.72
LINC01539-203ENST00000589447 MYOM1P52179 1685 aa4.28□□□□□ -1.72
LINC01539-203ENST00000589447 ROBO1Q9Y6N7 1651 aa4.28□□□□□ -1.72
LINC01539-203ENST00000589447 ERBINQ96RT1 1412 aa4.28□□□□□ -1.72
LINC01539-203ENST00000589447 NUP155O75694 1391 aa4.27□□□□□ -1.73
LINC01539-203ENST00000589447 NWD1Q149M9 1564 aa4.27□□□□□ -1.73
LINC01539-203ENST00000589447 KIAA1210Q9ULL0 1709 aa4.27□□□□□ -1.73
LINC01539-203ENST00000589447 NKTRP30414 1462 aaKnown RBP4.27□□□□□ -1.73
LINC01539-203ENST00000589447 ERVK-7P63135 1459 aa4.27□□□□□ -1.73
LINC01539-203ENST00000589447 ST20-MTHFSA0A0A6YYL1 179 aa4.27□□□□□ -1.73
LINC01539-203ENST00000589447 RBM47A0AV96 593 aaKnown RBP4.27□□□□□ -1.73
LINC01539-203ENST00000589447 NCLP19338 710 aaKnown RBP4.27□□□□□ -1.73
LINC01539-203ENST00000589447 CAMK2BQ13554 666 aa4.27□□□□□ -1.73
LINC01539-203ENST00000589447 MFSD10Q14728 455 aa4.27□□□□□ -1.73
LINC01539-203ENST00000589447 WDR43Q15061 677 aaKnown RBP eCLIP4.27□□□□□ -1.73
LINC01539-203ENST00000589447 SND1Q7KZF4 910 aaKnown RBP eCLIP4.27□□□□□ -1.73
LINC01539-203ENST00000589447 PARP9Q8IXQ6 854 aa4.27□□□□□ -1.73
LINC01539-203ENST00000589447 PIK3C2GO75747 1445 aa4.27□□□□□ -1.73
LINC01539-203ENST00000589447 DISP3Q9P2K9 1392 aa4.27□□□□□ -1.73
LINC01539-203ENST00000589447 EFCAB6Q5THR3 1501 aa4.26□□□□□ -1.73
LINC01539-203ENST00000589447 ASXL1Q8IXJ9 1541 aa4.26□□□□□ -1.73
LINC01539-203ENST00000589447 CGNL1Q0VF96 1302 aa4.26□□□□□ -1.73
LINC01539-203ENST00000589447 CHD2O14647 1828 aaKnown RBP4.26□□□□□ -1.73
LINC01539-203ENST00000589447 NRXN3Q9Y4C0 1643 aa4.26□□□□□ -1.73
LINC01539-203ENST00000589447 KIF3CO14782 793 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms