RNA–Protein interactions for RNA: ENST00000588507.5

TPM4-210, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 367 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-210ENST00000588507 PHRF1Q9P1Y6 1649 aaKnown RBP10.95□□□□□ -0.66
TPM4-210ENST00000588507 GPRASP1Q5JY77 1395 aa10.95□□□□□ -0.66
TPM4-210ENST00000588507 LBX1P52954 281 aa10.95□□□□□ -0.66
TPM4-210ENST00000588507 TFCP2L1Q9NZI6 479 aa10.94□□□□□ -0.66
TPM4-210ENST00000588507 STK26Q9P289 416 aa10.94□□□□□ -0.66
TPM4-210ENST00000588507 TRPM3Q9HCF6 1732 aaPredicted RBP10.94□□□□□ -0.66
TPM4-210ENST00000588507 CRYBG1Q9Y4K1 1723 aa10.94□□□□□ -0.66
TPM4-210ENST00000588507 C10orf71Q711Q0 1435 aa10.93□□□□□ -0.66
TPM4-210ENST00000588507 BRD4O60885 1362 aaPredicted RBP10.93□□□□□ -0.66
TPM4-210ENST00000588507 QSER1Q2KHR3 1735 aa10.93□□□□□ -0.66
TPM4-210ENST00000588507 IGSF1Q8N6C5 1336 aa10.93□□□□□ -0.66
TPM4-210ENST00000588507 PAK3O75914 559 aaPredicted RBP10.93□□□□□ -0.66
TPM4-210ENST00000588507 PRPF38BQ5VTL8 546 aaKnown RBP10.93□□□□□ -0.66
TPM4-210ENST00000588507 CFAP44Q96MT7 982 aa10.93□□□□□ -0.66
TPM4-210ENST00000588507 LRRC4BQ9NT99 713 aa10.93□□□□□ -0.66
TPM4-210ENST00000588507 ANKRD50Q9ULJ7 1429 aa10.92□□□□□ -0.66
TPM4-210ENST00000588507 PLEKHH1Q9ULM0 1364 aa10.92□□□□□ -0.66
TPM4-210ENST00000588507 KDM2BQ8NHM5 1336 aa10.92□□□□□ -0.66
TPM4-210ENST00000588507 RRAGCQ9HB90 399 aa10.92□□□□□ -0.66
TPM4-210ENST00000588507 LRRC37A3O60309 1634 aa10.91□□□□□ -0.66
TPM4-210ENST00000588507 CLTCL1P53675 1640 aa10.91□□□□□ -0.66
TPM4-210ENST00000588507 ANKRD30BQ9BXX2 1392 aa10.91□□□□□ -0.66
TPM4-210ENST00000588507 MKRN1Q9UHC7 482 aaKnown RBP10.91□□□□□ -0.66
TPM4-210ENST00000588507 ACIN1Q9UKV3 1341 aaKnown RBP10.9□□□□□ -0.66
TPM4-210ENST00000588507 MSH5O43196 834 aa10.9□□□□□ -0.66
TPM4-210ENST00000588507 HIRIP3Q9BW71 556 aaPredicted RBP10.9□□□□□ -0.66
TPM4-210ENST00000588507 CICQ96RK0 1608 aaPredicted RBP10.9□□□□□ -0.66
TPM4-210ENST00000588507 DLL1O00548 723 aa10.89□□□□□ -0.67
TPM4-210ENST00000588507 CRB1P82279 1406 aa10.89□□□□□ -0.67
TPM4-210ENST00000588507 PXDNLA1KZ92 1463 aa10.88□□□□□ -0.67
TPM4-210ENST00000588507 MSL1Q68DK7 614 aa10.88□□□□□ -0.67
TPM4-210ENST00000588507 CDCA7Q9BWT1 371 aaPredicted RBP10.88□□□□□ -0.67
TPM4-210ENST00000588507 ABCC11Q96J66 1382 aa10.88□□□□□ -0.67
TPM4-210ENST00000588507 HSPA8P11142 646 aaKnown RBP10.87□□□□□ -0.67
TPM4-210ENST00000588507 SLC27A3Q5K4L6 730 aa10.87□□□□□ -0.67
TPM4-210ENST00000588507 WBP1LQ9NX94 342 aa10.87□□□□□ -0.67
TPM4-210ENST00000588507 PLEKHG2Q9H7P9 1386 aa10.87□□□□□ -0.67
TPM4-210ENST00000588507 IFT172Q9UG01 1749 aa10.87□□□□□ -0.67
TPM4-210ENST00000588507 AKAP12Q02952 1782 aa10.86□□□□□ -0.67
TPM4-210ENST00000588507 KCPQ6ZWJ8 1503 aa10.86□□□□□ -0.67
TPM4-210ENST00000588507 ACSBG1Q96GR2 724 aa10.86□□□□□ -0.67
TPM4-210ENST00000588507 TNRC18O15417 2968 aaPredicted RBP10.86□□□□□ -0.67
TPM4-210ENST00000588507 ARHGAP27Q6ZUM4 889 aa10.85□□□□□ -0.67
TPM4-210ENST00000588507 CREBZFQ9NS37 354 aa10.85□□□□□ -0.67
TPM4-210ENST00000588507 ANKARQ7Z5J8 1434 aa10.84□□□□□ -0.67
TPM4-210ENST00000588507 EXOC5O00471 708 aa10.84□□□□□ -0.67
TPM4-210ENST00000588507 C9orf131Q5VYM1 1079 aa10.84□□□□□ -0.67
TPM4-210ENST00000588507 COL23A1Q86Y22 540 aaPredicted RBP10.84□□□□□ -0.67
TPM4-210ENST00000588507 CPDO75976 1380 aa10.84□□□□□ -0.67
TPM4-210ENST00000588507 COL5A2P05997 1499 aaPredicted RBP10.84□□□□□ -0.67
TPM4-210ENST00000588507 LMO7Q8WWI1 1683 aa10.84□□□□□ -0.67
TPM4-210ENST00000588507 RPGRIP1LQ68CZ1 1315 aa10.84□□□□□ -0.67
TPM4-210ENST00000588507 TOM1L2Q6ZVM7 507 aa10.83□□□□□ -0.68
TPM4-210ENST00000588507 NGDNQ8NEJ9 315 aaKnown RBP10.83□□□□□ -0.68
TPM4-210ENST00000588507 GCC1Q96CN9 775 aa10.83□□□□□ -0.68
TPM4-210ENST00000588507 SIRT1Q96EB6 747 aa10.83□□□□□ -0.68
TPM4-210ENST00000588507 NHSQ6T4R5 1651 aa10.82□□□□□ -0.68
TPM4-210ENST00000588507 TUBGCP6Q96RT7 1819 aa10.82□□□□□ -0.68
TPM4-210ENST00000588507 CNTNAP1P78357 1384 aa10.82□□□□□ -0.68
TPM4-210ENST00000588507 NUTM2GQ5VZR2 741 aa10.82□□□□□ -0.68
TPM4-210ENST00000588507 USP6P35125 1406 aa10.82□□□□□ -0.68
TPM4-210ENST00000588507 NUP155O75694 1391 aa10.8□□□□□ -0.68
TPM4-210ENST00000588507 TNRC6CQ9HCJ0 1690 aaKnown RBP10.8□□□□□ -0.68
TPM4-210ENST00000588507 TMEM132EQ6IEE7 984 aa10.8□□□□□ -0.68
TPM4-210ENST00000588507 BCS1LQ9Y276 419 aa10.8□□□□□ -0.68
TPM4-210ENST00000588507 KNDC1Q76NI1 1749 aa10.79□□□□□ -0.68
TPM4-210ENST00000588507 VEGFAP15692 232 aaPredicted RBP10.78□□□□□ -0.68
TPM4-210ENST00000588507 VEGFBP49765 207 aa10.78□□□□□ -0.68
TPM4-210ENST00000588507 KCNQ4P56696 695 aa10.78□□□□□ -0.68
TPM4-210ENST00000588507 BTAF1O14981 1849 aa10.78□□□□□ -0.68
TPM4-210ENST00000588507 KIF1BO60333 1816 aa10.78□□□□□ -0.68
TPM4-210ENST00000588507 TRPM1Q7Z4N2 1603 aa10.77□□□□□ -0.68
TPM4-210ENST00000588507 KANK4Q5T7N3 995 aaPredicted RBP10.77□□□□□ -0.69
TPM4-210ENST00000588507 MAP2K1Q02750 393 aaPredicted RBP10.76□□□□□ -0.69
TPM4-210ENST00000588507 SAFB2Q14151 953 aaKnown RBP eCLIP10.76□□□□□ -0.69
TPM4-210ENST00000588507 HABP4Q5JVS0 413 aaKnown RBP10.76□□□□□ -0.69
TPM4-210ENST00000588507 MCOLN1Q9GZU1 580 aa10.76□□□□□ -0.69
TPM4-210ENST00000588507 YTHDC2Q9H6S0 1430 aaKnown RBP10.75□□□□□ -0.69
TPM4-210ENST00000588507 KAT6BQ8WYB5 2073 aa10.75□□□□□ -0.69
TPM4-210ENST00000588507 WNK3Q9BYP7 1800 aa10.75□□□□□ -0.69
TPM4-210ENST00000588507 RNF181Q9P0P0 153 aa10.75□□□□□ -0.69
TPM4-210ENST00000588507 PITPNM2Q9BZ72 1349 aa10.75□□□□□ -0.69
TPM4-210ENST00000588507 ZBTB7CA1YPR0 619 aa10.74□□□□□ -0.69
TPM4-210ENST00000588507 GCP02774 474 aa10.74□□□□□ -0.69
TPM4-210ENST00000588507 FLAD1Q8NFF5 587 aa10.74□□□□□ -0.69
TPM4-210ENST00000588507 PKD1L3Q7Z443 1732 aa10.74□□□□□ -0.69
TPM4-210ENST00000588507 WDR17Q8IZU2 1322 aa10.74□□□□□ -0.69
TPM4-210ENST00000588507 FCHSD2O94868 740 aa10.73□□□□□ -0.69
TPM4-210ENST00000588507 PRR36Q9H6K5 1346 aa10.73□□□□□ -0.69
TPM4-210ENST00000588507 EIF3AQ14152 1382 aaKnown RBP10.73□□□□□ -0.69
TPM4-210ENST00000588507 CUL9Q8IWT3 2517 aa10.72□□□□□ -0.69
TPM4-210ENST00000588507 ABTB2Q8N961 1025 aa10.72□□□□□ -0.69
TPM4-210ENST00000588507 PRAM1Q96QH2 718 aa10.72□□□□□ -0.69
TPM4-210ENST00000588507 CARD10Q9BWT7 1032 aa10.72□□□□□ -0.69
TPM4-210ENST00000588507 ADGRF5Q8IZF2 1346 aa10.72□□□□□ -0.69
TPM4-210ENST00000588507 PIK3C2AO00443 1686 aa10.72□□□□□ -0.69
TPM4-210ENST00000588507 VIRMAQ69YN4 1812 aaKnown RBP10.72□□□□□ -0.69
TPM4-210ENST00000588507 PPLO60437 1756 aa10.71□□□□□ -0.69
TPM4-210ENST00000588507 TGFB2P61812 414 aa10.71□□□□□ -0.69
TPM4-210ENST00000588507 SLC17A8Q8NDX2 589 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms