RNA–Protein interactions for RNA: ENST00000588012.5

PTPRS-205, Transcript of protein tyrosine phosphatase, receptor type S, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTPRS, Length 5,993 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRS-205ENST00000588012 CD109Q6YHK3 1445 aa19.03■□□□□ 0.64
PTPRS-205ENST00000588012 ZC3H6P61129 1189 aaKnown RBP19.03■□□□□ 0.64
PTPRS-205ENST00000588012 CCDC141Q6ZP82 1450 aa19.02■□□□□ 0.64
PTPRS-205ENST00000588012 ZNF428Q96B54 188 aa19.02■□□□□ 0.63
PTPRS-205ENST00000588012 FANCIQ9NVI1 1328 aa19.01■□□□□ 0.63
PTPRS-205ENST00000588012 RABEP1Q15276 862 aa19.01■□□□□ 0.63
PTPRS-205ENST00000588012 UTP3Q9NQZ2 479 aaKnown RBP eCLIP19.01■□□□□ 0.633e-7■■■■■ 275.1
PTPRS-205ENST00000588012 KRT18P05783 430 aaKnown RBP19.01■□□□□ 0.63
PTPRS-205ENST00000588012 CCDC69A6NI79 296 aa19.01■□□□□ 0.63
PTPRS-205ENST00000588012 GNAT3A8MTJ3 354 aa19.01■□□□□ 0.63
PTPRS-205ENST00000588012 FCHSD2O94868 740 aa19.01■□□□□ 0.63
PTPRS-205ENST00000588012 PDILTQ8N807 584 aa19.01■□□□□ 0.63
PTPRS-205ENST00000588012 IQGAP2Q13576 1575 aa19.01■□□□□ 0.63
PTPRS-205ENST00000588012 LETM1O95202 739 aaPredicted RBP19■□□□□ 0.63
PTPRS-205ENST00000588012 STARD3NLO95772 234 aa19■□□□□ 0.63
PTPRS-205ENST00000588012 CYP46A1Q9Y6A2 500 aa19■□□□□ 0.63
PTPRS-205ENST00000588012 BCAR3O75815 825 aa19■□□□□ 0.63
PTPRS-205ENST00000588012 SETQ01105 290 aaPredicted RBP19■□□□□ 0.63
PTPRS-205ENST00000588012 STK11IPQ8N1F8 1099 aa19■□□□□ 0.63
PTPRS-205ENST00000588012 CCDC61Q9Y6R9 512 aa19■□□□□ 0.63
PTPRS-205ENST00000588012 ARHGEF11O15085 1522 aa19■□□□□ 0.63
PTPRS-205ENST00000588012 KINO60870 393 aaKnown RBP18.99■□□□□ 0.63
PTPRS-205ENST00000588012 NSD3Q9BZ95 1437 aa18.99■□□□□ 0.63
PTPRS-205ENST00000588012 ANKRD1Q15327 319 aa18.99■□□□□ 0.63
PTPRS-205ENST00000588012 ZFYVE27Q5T4F4 411 aa18.99■□□□□ 0.63
PTPRS-205ENST00000588012 BICDL1Q6ZP65 573 aa18.99■□□□□ 0.63
PTPRS-205ENST00000588012 AACSQ86V21 672 aa18.99■□□□□ 0.63
PTPRS-205ENST00000588012 MAGI1Q96QZ7 1491 aaPredicted RBP18.99■□□□□ 0.63
PTPRS-205ENST00000588012 TRIM22Q8IYM9 498 aa18.99■□□□□ 0.63
PTPRS-205ENST00000588012 IFT57Q9NWB7 429 aa18.99■□□□□ 0.63
PTPRS-205ENST00000588012 MAGEC2Q9UBF1 373 aaPredicted RBP18.99■□□□□ 0.63
PTPRS-205ENST00000588012 IGHMBP2P38935 993 aaKnown RBP18.98■□□□□ 0.63
PTPRS-205ENST00000588012 FKBP4Q02790 459 aaKnown RBP eCLIP18.98■□□□□ 0.63
PTPRS-205ENST00000588012 ATF7IPQ6VMQ6 1270 aa18.98■□□□□ 0.63
PTPRS-205ENST00000588012 MAP4K4O95819 1239 aaPredicted RBP18.98■□□□□ 0.63
PTPRS-205ENST00000588012 STK38Q15208 465 aa18.98■□□□□ 0.63
PTPRS-205ENST00000588012 NFE2L2Q16236 605 aa18.97■□□□□ 0.63
PTPRS-205ENST00000588012 CEP126Q9P2H0 1117 aa18.97■□□□□ 0.63
PTPRS-205ENST00000588012 SRGAP3O43295 1099 aa18.96■□□□□ 0.63
PTPRS-205ENST00000588012 SOGA3Q5TF21 947 aa18.96■□□□□ 0.63
PTPRS-205ENST00000588012 KIF14Q15058 1648 aa18.96■□□□□ 0.63
PTPRS-205ENST00000588012 HSP90AB2PQ58FF8 381 aa18.96■□□□□ 0.63
PTPRS-205ENST00000588012 RUFY1Q96T51 708 aa18.96■□□□□ 0.63
PTPRS-205ENST00000588012 MVPQ14764 893 aaKnown RBP18.96■□□□□ 0.63
PTPRS-205ENST00000588012 MNS1Q8NEH6 495 aa18.96■□□□□ 0.63
PTPRS-205ENST00000588012 TMOD3Q9NYL9 352 aa18.96■□□□□ 0.63
PTPRS-205ENST00000588012 RAI14Q9P0K7 980 aa18.96■□□□□ 0.63
PTPRS-205ENST00000588012 ADGRL1O94910 1474 aa18.95■□□□□ 0.62
PTPRS-205ENST00000588012 CCDC173Q0VFZ6 552 aa18.95■□□□□ 0.62
PTPRS-205ENST00000588012 FILIP1LQ4L180 1135 aa18.95■□□□□ 0.62
PTPRS-205ENST00000588012 JMYQ8N9B5 988 aa18.95■□□□□ 0.62
PTPRS-205ENST00000588012 ZSCAN29Q8IWY8 852 aaPredicted RBP18.95■□□□□ 0.62
PTPRS-205ENST00000588012 ZNF652Q9Y2D9 606 aa18.95■□□□□ 0.62
PTPRS-205ENST00000588012 PIP4K2AP48426 406 aaPredicted RBP18.94■□□□□ 0.62
PTPRS-205ENST00000588012 NUP133Q8WUM0 1156 aa18.94■□□□□ 0.62
PTPRS-205ENST00000588012 CDR1P51861 262 aa18.94■□□□□ 0.62
PTPRS-205ENST00000588012 STK3Q13188 491 aa18.94■□□□□ 0.62
PTPRS-205ENST00000588012 AEBP1Q8IUX7 1158 aa18.94■□□□□ 0.62
PTPRS-205ENST00000588012 TDO2P48775 406 aa18.94■□□□□ 0.62
PTPRS-205ENST00000588012 CAMSAP2Q08AD1 1489 aa18.93■□□□□ 0.62
PTPRS-205ENST00000588012 WAPLQ7Z5K2 1190 aa18.93■□□□□ 0.62
PTPRS-205ENST00000588012 AK7Q96M32 723 aa18.93■□□□□ 0.62
PTPRS-205ENST00000588012 LAMC3Q9Y6N6 1575 aa18.93■□□□□ 0.62
PTPRS-205ENST00000588012 MBD3O95983 291 aa18.93■□□□□ 0.62
PTPRS-205ENST00000588012 CTNNA3Q9UI47 895 aa18.93■□□□□ 0.62
PTPRS-205ENST00000588012 SMARCE1Q969G3 411 aa18.92■□□□□ 0.62
PTPRS-205ENST00000588012 ABCA10Q8WWZ4 1543 aa18.92■□□□□ 0.62
PTPRS-205ENST00000588012 SMC2O95347 1197 aa18.92■□□□□ 0.62
PTPRS-205ENST00000588012 RDXP35241 583 aaKnown RBP18.92■□□□□ 0.62
PTPRS-205ENST00000588012 CEBPZQ03701 1054 aaKnown RBP18.92■□□□□ 0.62
PTPRS-205ENST00000588012 SYCP1Q15431 976 aa18.92■□□□□ 0.62
PTPRS-205ENST00000588012 CAGE1Q8TC20 777 aa18.92■□□□□ 0.62
PTPRS-205ENST00000588012 LRP2BPQ9P2M1 347 aa18.92■□□□□ 0.62
PTPRS-205ENST00000588012 ZPR1O75312 459 aa18.91■□□□□ 0.62
PTPRS-205ENST00000588012 ARGLU1Q9NWB6 273 aaPredicted RBP18.91■□□□□ 0.62
PTPRS-205ENST00000588012 CCDC39Q9UFE4 941 aa18.91■□□□□ 0.62
PTPRS-205ENST00000588012 FBXO3Q9UK99 471 aa18.91■□□□□ 0.62
PTPRS-205ENST00000588012 RSPH6AQ9H0K4 717 aa18.91■□□□□ 0.62
PTPRS-205ENST00000588012 ACBD3Q9H3P7 528 aa18.91■□□□□ 0.62
PTPRS-205ENST00000588012 CUL7Q14999 1698 aa18.91■□□□□ 0.62
PTPRS-205ENST00000588012 CHD1LQ86WJ1 897 aa18.91■□□□□ 0.62
PTPRS-205ENST00000588012 UBAC1Q9BSL1 405 aa18.91■□□□□ 0.62
PTPRS-205ENST00000588012 NOL7Q9UMY1 257 aaKnown RBP18.91■□□□□ 0.62
PTPRS-205ENST00000588012 CDKL5O76039 1030 aa18.9■□□□□ 0.62
PTPRS-205ENST00000588012 TEX35Q5T0J7 233 aa18.9■□□□□ 0.62
PTPRS-205ENST00000588012 TMPOP42166 694 aaKnown RBP18.9■□□□□ 0.62
PTPRS-205ENST00000588012 AMOTQ4VCS5 1084 aa18.9■□□□□ 0.62
PTPRS-205ENST00000588012 FIBPO43427 364 aa18.89■□□□□ 0.62
PTPRS-205ENST00000588012 TRIM5Q9C035 493 aa18.89■□□□□ 0.62
PTPRS-205ENST00000588012 SPINK5Q9NQ38 1064 aaPredicted RBP18.89■□□□□ 0.62
PTPRS-205ENST00000588012 TMOD2Q9NZR1 351 aa18.89■□□□□ 0.62
PTPRS-205ENST00000588012 FAM135AQ9P2D6 1515 aa18.89■□□□□ 0.62
PTPRS-205ENST00000588012 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.89■□□□□ 0.61
PTPRS-205ENST00000588012 HSP90AA2PQ14568 343 aaPredicted RBP18.89■□□□□ 0.61
PTPRS-205ENST00000588012 CCDC85AQ96PX6 553 aaPredicted RBP18.89■□□□□ 0.61
PTPRS-205ENST00000588012 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.89■□□□□ 0.61
PTPRS-205ENST00000588012 TSPY26PQ9H489 355 aa18.89■□□□□ 0.61
PTPRS-205ENST00000588012 PRPF40AO75400 957 aaKnown RBP18.88■□□□□ 0.61
PTPRS-205ENST00000588012 CAVIN1Q6NZI2 390 aaKnown RBP18.88■□□□□ 0.61
PTPRS-205ENST00000588012 PATL2C9JE40 543 aaKnown RBP18.88■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms