RNA–Protein interactions for RNA: ENST00000588009.1

TUBD1-208, Transcript of tubulin delta 1, humanhuman

TSL 3

Gene TUBD1, Length 812 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBD1-208ENST00000588009 USP17L12C9JPN9 530 aa9.28□□□□□ -0.92
TUBD1-208ENST00000588009 USP17L11C9JVI0 530 aa9.28□□□□□ -0.92
TUBD1-208ENST00000588009 USP17L21D6R901 530 aa9.28□□□□□ -0.92
TUBD1-208ENST00000588009 USP17L18D6R9N7 530 aa9.28□□□□□ -0.92
TUBD1-208ENST00000588009 USP17L22D6RA61 530 aa9.28□□□□□ -0.92
TUBD1-208ENST00000588009 USP17L17D6RBQ6 530 aa9.28□□□□□ -0.92
TUBD1-208ENST00000588009 USP17L19D6RCP7 530 aa9.28□□□□□ -0.92
TUBD1-208ENST00000588009 USP17L20D6RJB6 530 aa9.28□□□□□ -0.92
TUBD1-208ENST00000588009 LZTS3O60299 673 aaPredicted RBP9.28□□□□□ -0.92
TUBD1-208ENST00000588009 USP17L24Q0WX57 530 aa9.28□□□□□ -0.92
TUBD1-208ENST00000588009 NCOA4Q13772 614 aa9.28□□□□□ -0.92
TUBD1-208ENST00000588009 CRTC2Q53ET0 693 aaPredicted RBP9.28□□□□□ -0.92
TUBD1-208ENST00000588009 LARP1Q6PKG0 1096 aaKnown RBP9.28□□□□□ -0.92
TUBD1-208ENST00000588009 ATP5J2-PTCD1G3V325 749 aa9.27□□□□□ -0.93
TUBD1-208ENST00000588009 RASA1P20936 1047 aa9.27□□□□□ -0.93
TUBD1-208ENST00000588009 PTK7Q13308 1070 aa9.27□□□□□ -0.93
TUBD1-208ENST00000588009 PLPP7Q8NBV4 271 aa9.27□□□□□ -0.93
TUBD1-208ENST00000588009 PRDM9Q9NQV7 894 aa9.27□□□□□ -0.93
TUBD1-208ENST00000588009 CHIC2Q9UKJ5 165 aa9.27□□□□□ -0.93
TUBD1-208ENST00000588009 COPS2P61201 443 aa9.26□□□□□ -0.93
TUBD1-208ENST00000588009 LAPTM4AQ15012 233 aa9.26□□□□□ -0.93
TUBD1-208ENST00000588009 PHLDB3Q6NSJ2 640 aa9.26□□□□□ -0.93
TUBD1-208ENST00000588009 ADAM32Q8TC27 787 aa9.26□□□□□ -0.93
TUBD1-208ENST00000588009 ARHGAP9Q9BRR9 750 aa9.26□□□□□ -0.93
TUBD1-208ENST00000588009 CDCA7Q9BWT1 371 aaPredicted RBP9.26□□□□□ -0.93
TUBD1-208ENST00000588009 IL21Q9HBE4 155 aa9.26□□□□□ -0.93
TUBD1-208ENST00000588009 RBM25P49756 843 aaKnown RBP9.25□□□□□ -0.93
TUBD1-208ENST00000588009 MAP7D1Q3KQU3 841 aa9.25□□□□□ -0.93
TUBD1-208ENST00000588009 TXNDC2Q86VQ3 553 aa9.25□□□□□ -0.93
TUBD1-208ENST00000588009 CCER1Q8TC90 406 aaPredicted RBP9.25□□□□□ -0.93
TUBD1-208ENST00000588009 FAM200AQ8TCP9 573 aa9.25□□□□□ -0.93
TUBD1-208ENST00000588009 ZNF428Q96B54 188 aa9.25□□□□□ -0.93
TUBD1-208ENST00000588009 FAM69CQ0P6D2 419 aa9.24□□□□□ -0.93
TUBD1-208ENST00000588009 ZBTB33Q86T24 672 aa9.24□□□□□ -0.93
TUBD1-208ENST00000588009 SSFA2P28290 1259 aa9.23□□□□□ -0.93
TUBD1-208ENST00000588009 EML3Q32P44 896 aa9.23□□□□□ -0.93
TUBD1-208ENST00000588009 TJAP1Q5JTD0 557 aa9.23□□□□□ -0.93
TUBD1-208ENST00000588009 PTCRAQ6ISU1 281 aaPredicted RBP9.23□□□□□ -0.93
TUBD1-208ENST00000588009 TRAF7Q6Q0C0 670 aa9.23□□□□□ -0.93
TUBD1-208ENST00000588009 SH3BP5LQ7L8J4 393 aa9.23□□□□□ -0.93
TUBD1-208ENST00000588009 ANKMY2Q8IV38 441 aa9.23□□□□□ -0.93
TUBD1-208ENST00000588009 SLAIN2Q9P270 581 aa9.23□□□□□ -0.93
TUBD1-208ENST00000588009 ADH1BP00325 375 aa9.22□□□□□ -0.93
TUBD1-208ENST00000588009 TSGA10IPQ3SY00 556 aa9.22□□□□□ -0.93
TUBD1-208ENST00000588009 CCDC24Q8N4L8 307 aa9.22□□□□□ -0.93
TUBD1-208ENST00000588009 CLP1Q92989 425 aaKnown RBP9.22□□□□□ -0.93
TUBD1-208ENST00000588009 UNC93B1Q9H1C4 597 aa9.22□□□□□ -0.93
TUBD1-208ENST00000588009 ZPR1O75312 459 aa9.21□□□□□ -0.94
TUBD1-208ENST00000588009 ARID4AP29374 1257 aaPredicted RBP9.21□□□□□ -0.94
TUBD1-208ENST00000588009 DZIP3Q86Y13 1208 aaKnown RBP9.21□□□□□ -0.94
TUBD1-208ENST00000588009 OGFOD1Q8N543 542 aa9.21□□□□□ -0.94
TUBD1-208ENST00000588009 AMOTL2Q9Y2J4 779 aa9.21□□□□□ -0.94
TUBD1-208ENST00000588009 TLL1O43897 1013 aa9.2□□□□□ -0.94
TUBD1-208ENST00000588009 DPYDQ12882 1025 aa9.2□□□□□ -0.94
TUBD1-208ENST00000588009 TRIM50Q86XT4 487 aa9.2□□□□□ -0.94
TUBD1-208ENST00000588009 MTRQ99707 1265 aa9.2□□□□□ -0.94
TUBD1-208ENST00000588009 NOD1Q9Y239 953 aa9.2□□□□□ -0.94
TUBD1-208ENST00000588009 GGCXP38435 758 aa9.19□□□□□ -0.94
TUBD1-208ENST00000588009 CCDC85AQ96PX6 553 aaPredicted RBP9.19□□□□□ -0.94
TUBD1-208ENST00000588009 DNAAF2Q9NVR5 837 aaKnown RBP9.19□□□□□ -0.94
TUBD1-208ENST00000588009 ATP1A2P50993 1020 aa9.18□□□□□ -0.94
TUBD1-208ENST00000588009 CLDN10P78369 228 aa9.18□□□□□ -0.94
TUBD1-208ENST00000588009 ZNF594Q96JF6 807 aaPredicted RBP9.18□□□□□ -0.94
TUBD1-208ENST00000588009 CARD14Q9BXL6 1004 aa9.18□□□□□ -0.94
TUBD1-208ENST00000588009 E9PSI1 815 aa9.17□□□□□ -0.94
TUBD1-208ENST00000588009 ZBTB7BO15156 539 aaPredicted RBP9.17□□□□□ -0.94
TUBD1-208ENST00000588009 GIGYF1O75420 1035 aaPredicted RBP9.17□□□□□ -0.94
TUBD1-208ENST00000588009 ATP2B4P23634 1241 aa9.17□□□□□ -0.94
TUBD1-208ENST00000588009 SWI5Q1ZZU3 235 aa9.17□□□□□ -0.94
TUBD1-208ENST00000588009 Q6ZNB5 142 aa9.17□□□□□ -0.94
TUBD1-208ENST00000588009 SH3RF1Q7Z6J0 888 aa9.17□□□□□ -0.94
TUBD1-208ENST00000588009 LARGE2Q8N3Y3 721 aa9.17□□□□□ -0.94
TUBD1-208ENST00000588009 SLC6A16Q9GZN6 736 aa9.17□□□□□ -0.94
TUBD1-208ENST00000588009 DOLKQ9UPQ8 538 aa9.17□□□□□ -0.94
TUBD1-208ENST00000588009 MAGEB6P1A0A0J9YX57 407 aa9.16□□□□□ -0.94
TUBD1-208ENST00000588009 BAP1Q92560 729 aa9.16□□□□□ -0.94
TUBD1-208ENST00000588009 V9GY48 417 aaPredicted RBP9.16□□□□□ -0.94
TUBD1-208ENST00000588009 DKK1O94907 266 aa9.15□□□□□ -0.94
TUBD1-208ENST00000588009 ERFEQ4G0M1 354 aa9.15□□□□□ -0.94
TUBD1-208ENST00000588009 BPHLQ86WA6 291 aaPredicted RBP9.15□□□□□ -0.94
TUBD1-208ENST00000588009 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.15□□□□□ -0.94
TUBD1-208ENST00000588009 OXLD1Q5BKU9 147 aa9.14□□□□□ -0.95
TUBD1-208ENST00000588009 RNF20Q5VTR2 975 aa9.14□□□□□ -0.95
TUBD1-208ENST00000588009 PPP1R18Q6NYC8 613 aa9.14□□□□□ -0.95
TUBD1-208ENST00000588009 SIX5Q8N196 739 aa9.14□□□□□ -0.95
TUBD1-208ENST00000588009 ZNF516Q92618 1163 aa9.14□□□□□ -0.95
TUBD1-208ENST00000588009 SOWAHDA6NJG2 315 aa9.13□□□□□ -0.95
TUBD1-208ENST00000588009 GTF2IP78347 998 aa9.13□□□□□ -0.95
TUBD1-208ENST00000588009 AGERQ15109 404 aa9.13□□□□□ -0.95
TUBD1-208ENST00000588009 C1orf216Q8TAB5 229 aa9.13□□□□□ -0.95
TUBD1-208ENST00000588009 FOXJ1Q92949 421 aa9.13□□□□□ -0.95
TUBD1-208ENST00000588009 PRKD2Q9BZL6 878 aa9.13□□□□□ -0.95
TUBD1-208ENST00000588009 KIAA1024Q9UPX6 916 aa9.13□□□□□ -0.95
TUBD1-208ENST00000588009 GFRA3O60609 400 aa9.12□□□□□ -0.95
TUBD1-208ENST00000588009 SEC13P55735 322 aa9.12□□□□□ -0.95
TUBD1-208ENST00000588009 LINC01559Q495D7 138 aa9.12□□□□□ -0.95
TUBD1-208ENST00000588009 C4orf48Q5BLP8 95 aa9.12□□□□□ -0.95
TUBD1-208ENST00000588009 ZNF511Q8NB15 262 aa9.12□□□□□ -0.95
TUBD1-208ENST00000588009 RBM19Q9Y4C8 960 aaKnown RBP9.12□□□□□ -0.95
TUBD1-208ENST00000588009 SCNN1AP37088 669 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms