RNA–Protein interactions for RNA: ENST00000587730.5

DDX39A-206, Transcript of DExD-box helicase 39A, humanhuman

TSL 1 (best)

Gene DDX39A, Length 1,813 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-206ENST00000587730 CDK12Q9NYV4 1490 aaPredicted RBP23.29■■□□□ 1.32
DDX39A-206ENST00000587730 AATKQ6ZMQ8 1374 aa23.29■■□□□ 1.32
DDX39A-206ENST00000587730 PRKAR2BP31323 418 aa23.29■■□□□ 1.32
DDX39A-206ENST00000587730 EDC4Q6P2E9 1401 aaKnown RBP23.28■■□□□ 1.32
DDX39A-206ENST00000587730 POLKQ9UBT6 870 aa23.27■■□□□ 1.32
DDX39A-206ENST00000587730 GOLGA6L3A6NEY3 463 aa23.26■■□□□ 1.31
DDX39A-206ENST00000587730 HAP1P54257 671 aaPredicted RBP23.26■■□□□ 1.31
DDX39A-206ENST00000587730 STAG3Q9UJ98 1225 aa23.26■■□□□ 1.31
DDX39A-206ENST00000587730 ZBTB7BO15156 539 aaPredicted RBP23.24■■□□□ 1.31
DDX39A-206ENST00000587730 MRPL50Q8N5N7 158 aaKnown RBP23.24■■□□□ 1.31
DDX39A-206ENST00000587730 API5Q9BZZ5 524 aaKnown RBP23.24■■□□□ 1.31
DDX39A-206ENST00000587730 FSD2A1L4K1 749 aa23.24■■□□□ 1.31
DDX39A-206ENST00000587730 CPSF1Q10570 1443 aaKnown RBP23.23■■□□□ 1.31
DDX39A-206ENST00000587730 VAMP4O75379 141 aa23.23■■□□□ 1.31
DDX39A-206ENST00000587730 ZNF853P0CG23 659 aa23.23■■□□□ 1.31
DDX39A-206ENST00000587730 ABCC4O15439 1325 aa23.23■■□□□ 1.31
DDX39A-206ENST00000587730 DDIT3P35638 169 aa23.21■■□□□ 1.31
DDX39A-206ENST00000587730 LNPKQ9C0E8 428 aa23.21■■□□□ 1.31
DDX39A-206ENST00000587730 A2ML1A8K2U0 1454 aa23.2■■□□□ 1.3
DDX39A-206ENST00000587730 SIRT1Q96EB6 747 aa23.2■■□□□ 1.3
DDX39A-206ENST00000587730 SPATA31D1Q6ZQQ2 1576 aa23.2■■□□□ 1.3
DDX39A-206ENST00000587730 TRAK2O60296 914 aa23.19■■□□□ 1.3
DDX39A-206ENST00000587730 GBP4Q96PP9 640 aa23.19■■□□□ 1.3
DDX39A-206ENST00000587730 IL13P35225 146 aa23.19■■□□□ 1.3
DDX39A-206ENST00000587730 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.19■■□□□ 1.3
DDX39A-206ENST00000587730 ZNF692Q9BU19 519 aaPredicted RBP23.19■■□□□ 1.3
DDX39A-206ENST00000587730 RIMS2Q9UQ26 1411 aa23.18■■□□□ 1.3
DDX39A-206ENST00000587730 MRE11P49959 708 aa23.18■■□□□ 1.3
DDX39A-206ENST00000587730 SKOR2Q2VWA4 1001 aaPredicted RBP23.18■■□□□ 1.3
DDX39A-206ENST00000587730 ANKRD45Q5TZF3 282 aa23.17■■□□□ 1.3
DDX39A-206ENST00000587730 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.17■■□□□ 1.3
DDX39A-206ENST00000587730 ESF1Q9H501 851 aaKnown RBP23.17■■□□□ 1.3
DDX39A-206ENST00000587730 FER1L4A9Z1Z3 1794 aa23.16■■□□□ 1.3
DDX39A-206ENST00000587730 HSP90AB1P08238 724 aaKnown RBP23.16■■□□□ 1.3
DDX39A-206ENST00000587730 SETD1AO15047 1707 aaKnown RBP23.15■■□□□ 1.3
DDX39A-206ENST00000587730 WASLO00401 505 aaPredicted RBP23.15■■□□□ 1.3
DDX39A-206ENST00000587730 TWISTNBQ3B726 338 aaPredicted RBP23.15■■□□□ 1.3
DDX39A-206ENST00000587730 ANO8Q9HCE9 1232 aaPredicted RBP23.15■■□□□ 1.3
DDX39A-206ENST00000587730 ADAMTSL3P82987 1691 aa23.14■■□□□ 1.3
DDX39A-206ENST00000587730 FBXO31Q5XUX0 539 aaPredicted RBP23.14■■□□□ 1.29
DDX39A-206ENST00000587730 COG3Q96JB2 828 aa23.14■■□□□ 1.29
DDX39A-206ENST00000587730 PHACTR3Q96KR7 559 aa23.14■■□□□ 1.29
DDX39A-206ENST00000587730 MBIPQ9NS73 344 aa23.14■■□□□ 1.29
DDX39A-206ENST00000587730 CDC45O75419 566 aa23.13■■□□□ 1.29
DDX39A-206ENST00000587730 SPRYD3Q8NCJ5 442 aa23.12■■□□□ 1.29
DDX39A-206ENST00000587730 HDGFP51858 240 aaKnown RBP23.12■■□□□ 1.29
DDX39A-206ENST00000587730 PLPPR3Q6T4P5 718 aa23.12■■□□□ 1.29
DDX39A-206ENST00000587730 TECPR2O15040 1411 aa23.12■■□□□ 1.29
DDX39A-206ENST00000587730 MAP2P11137 1827 aaKnown RBP23.11■■□□□ 1.29
DDX39A-206ENST00000587730 XRCC6P12956 609 aaKnown RBP eCLIP23.11■■□□□ 1.29
DDX39A-206ENST00000587730 RIMS1Q86UR5 1692 aaKnown RBP23.11■■□□□ 1.29
DDX39A-206ENST00000587730 HMOX1P09601 288 aa23.1■■□□□ 1.29
DDX39A-206ENST00000587730 RAB3GAP1Q15042 981 aa23.1■■□□□ 1.29
DDX39A-206ENST00000587730 KNDC1Q76NI1 1749 aa23.1■■□□□ 1.29
DDX39A-206ENST00000587730 CEBPAP49715 358 aaPredicted RBP23.1■■□□□ 1.29
DDX39A-206ENST00000587730 MON2Q7Z3U7 1717 aa23.09■■□□□ 1.29
DDX39A-206ENST00000587730 K7ELQ4 463 aaPredicted RBP23.09■■□□□ 1.29
DDX39A-206ENST00000587730 TBC1D9Q6ZT07 1266 aa23.09■■□□□ 1.29
DDX39A-206ENST00000587730 CCDC61Q9Y6R9 512 aa23.09■■□□□ 1.29
DDX39A-206ENST00000587730 HSP90AA1P07900 732 aaKnown RBP23.08■■□□□ 1.29
DDX39A-206ENST00000587730 EMILIN1Q9Y6C2 1016 aa23.08■■□□□ 1.29
DDX39A-206ENST00000587730 INTS3Q68E01 1043 aaKnown RBP23.08■■□□□ 1.28
DDX39A-206ENST00000587730 WAPLQ7Z5K2 1190 aa23.08■■□□□ 1.28
DDX39A-206ENST00000587730 NRKQ7Z2Y5 1582 aa23.07■■□□□ 1.28
DDX39A-206ENST00000587730 GOLGA6L22H0YM25 854 aa23.07■■□□□ 1.28
DDX39A-206ENST00000587730 TSPYL6Q8N831 410 aa23.07■■□□□ 1.28
DDX39A-206ENST00000587730 KIAA0232Q92628 1395 aa23.06■■□□□ 1.28
DDX39A-206ENST00000587730 CLEC17AQ6ZS10 378 aa23.06■■□□□ 1.28
DDX39A-206ENST00000587730 RPAP2Q8IXW5 612 aaPredicted RBP23.06■■□□□ 1.28
DDX39A-206ENST00000587730 KIF2CQ99661 725 aa23.06■■□□□ 1.28
DDX39A-206ENST00000587730 DCTPP1Q9H773 170 aa23.06■■□□□ 1.28
DDX39A-206ENST00000587730 SIRT2Q8IXJ6 389 aa23.05■■□□□ 1.28
DDX39A-206ENST00000587730 TNPO1Q92973 898 aaKnown RBP23.05■■□□□ 1.28
DDX39A-206ENST00000587730 RABEP1Q15276 862 aa23.05■■□□□ 1.28
DDX39A-206ENST00000587730 NME9Q86XW9 330 aa23.05■■□□□ 1.28
DDX39A-206ENST00000587730 NUDT16Q96DE0 195 aaKnown RBP23.05■■□□□ 1.28
DDX39A-206ENST00000587730 PTPRCP08575 1304 aa23.05■■□□□ 1.28
DDX39A-206ENST00000587730 CPS1P31327 1500 aa23.04■■□□□ 1.28
DDX39A-206ENST00000587730 C3P01024 1663 aa23.04■■□□□ 1.28
DDX39A-206ENST00000587730 CASC1Q6TDU7 716 aa23.03■■□□□ 1.28
DDX39A-206ENST00000587730 THUMPD2Q9BTF0 503 aaKnown RBP23.03■■□□□ 1.28
DDX39A-206ENST00000587730 ILDR1Q86SU0 546 aaPredicted RBP23.03■■□□□ 1.28
DDX39A-206ENST00000587730 C8orf58Q8NAV2 365 aa23.03■■□□□ 1.28
DDX39A-206ENST00000587730 GRPEL1Q9HAV7 217 aa23.03■■□□□ 1.28
DDX39A-206ENST00000587730 NRXN3Q9Y4C0 1643 aa23.02■■□□□ 1.28
DDX39A-206ENST00000587730 GZF1Q9H116 711 aaPredicted RBP23.02■■□□□ 1.28
DDX39A-206ENST00000587730 AKAP12Q02952 1782 aa23.02■■□□□ 1.28
DDX39A-206ENST00000587730 ANKRD44Q8N8A2 993 aa23.01■■□□□ 1.27
DDX39A-206ENST00000587730 ITSN1Q15811 1721 aa23.01■■□□□ 1.27
DDX39A-206ENST00000587730 C1orf115Q9H7X2 142 aa23.01■■□□□ 1.27
DDX39A-206ENST00000587730 TTC22Q5TAA0 569 aa23■■□□□ 1.27
DDX39A-206ENST00000587730 SENP3Q9H4L4 574 aaPredicted RBP23■■□□□ 1.27
DDX39A-206ENST00000587730 PLEKHM2Q8IWE5 1019 aa22.99■■□□□ 1.27
DDX39A-206ENST00000587730 IBTKQ9P2D0 1353 aaPredicted RBP22.99■■□□□ 1.27
DDX39A-206ENST00000587730 CLCN1P35523 988 aa22.98■■□□□ 1.27
DDX39A-206ENST00000587730 DLG5Q8TDM6 1919 aa22.97■■□□□ 1.27
DDX39A-206ENST00000587730 METP08581 1390 aa22.97■■□□□ 1.27
DDX39A-206ENST00000587730 ELL2O00472 640 aaPredicted RBP22.97■■□□□ 1.27
DDX39A-206ENST00000587730 CHL1O00533 1208 aa22.97■■□□□ 1.27
DDX39A-206ENST00000587730 NUCB2P80303 420 aa22.97■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 174.5 ms