RNA–Protein interactions for RNA: ENST00000587184.5

LAMA3-207, Transcript of laminin subunit alpha 3, humanhuman

TSL 1 (best) BASIC

Gene LAMA3, Length 5,007 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA3-207ENST00000587184 GNAT3A8MTJ3 354 aa11.25□□□□□ -0.61
LAMA3-207ENST00000587184 DCTN1Q14203 1278 aa11.25□□□□□ -0.61
LAMA3-207ENST00000587184 CCDC27Q2M243 656 aa11.25□□□□□ -0.61
LAMA3-207ENST00000587184 NECTIN2Q92692 538 aa11.25□□□□□ -0.61
LAMA3-207ENST00000587184 CENPQQ7L2Z9 268 aaPredicted RBP11.25□□□□□ -0.61
LAMA3-207ENST00000587184 USP35Q9P2H5 1018 aa11.25□□□□□ -0.61
LAMA3-207ENST00000587184 PTPRMP28827 1452 aa11.25□□□□□ -0.61
LAMA3-207ENST00000587184 IQGAP1P46940 1657 aa11.25□□□□□ -0.61
LAMA3-207ENST00000587184 MCM10Q7L590 875 aa11.25□□□□□ -0.61
LAMA3-207ENST00000587184 NKTRP30414 1462 aaKnown RBP11.24□□□□□ -0.61
LAMA3-207ENST00000587184 GCP02774 474 aa11.24□□□□□ -0.61
LAMA3-207ENST00000587184 ZNF428Q96B54 188 aa11.24□□□□□ -0.61
LAMA3-207ENST00000587184 IFT57Q9NWB7 429 aa11.24□□□□□ -0.61
LAMA3-207ENST00000587184 SPG7Q9UQ90 795 aa11.24□□□□□ -0.61
LAMA3-207ENST00000587184 ADAMTS13Q76LX8 1427 aa11.24□□□□□ -0.61
LAMA3-207ENST00000587184 PIP4K2BP78356 416 aa11.24□□□□□ -0.61
LAMA3-207ENST00000587184 AAMPQ13685 434 aa11.24□□□□□ -0.61
LAMA3-207ENST00000587184 AEBP1Q8IUX7 1158 aa11.24□□□□□ -0.61
LAMA3-207ENST00000587184 TMEM94Q12767 1356 aa11.23□□□□□ -0.61
LAMA3-207ENST00000587184 FANCIQ9NVI1 1328 aa11.23□□□□□ -0.61
LAMA3-207ENST00000587184 IL13P35225 146 aa11.23□□□□□ -0.61
LAMA3-207ENST00000587184 ZNF330Q9Y3S2 320 aaPredicted RBP11.23□□□□□ -0.61
LAMA3-207ENST00000587184 IL16Q14005 1332 aa11.23□□□□□ -0.61
LAMA3-207ENST00000587184 DLC1Q96QB1 1528 aa11.23□□□□□ -0.61
LAMA3-207ENST00000587184 OS9Q13438 667 aaPredicted RBP11.23□□□□□ -0.61
LAMA3-207ENST00000587184 AMOTQ4VCS5 1084 aa11.23□□□□□ -0.61
LAMA3-207ENST00000587184 ANKRD24Q8TF21 1146 aa11.23□□□□□ -0.61
LAMA3-207ENST00000587184 TULP4Q9NRJ4 1543 aa11.22□□□□□ -0.61
LAMA3-207ENST00000587184 FKBP5Q13451 457 aaPredicted RBP11.22□□□□□ -0.61
LAMA3-207ENST00000587184 RSPH6AQ9H0K4 717 aa11.22□□□□□ -0.61
LAMA3-207ENST00000587184 HMMRO75330 724 aa11.22□□□□□ -0.61
LAMA3-207ENST00000587184 HOXC9P31274 260 aa11.22□□□□□ -0.61
LAMA3-207ENST00000587184 RARSP54136 660 aaKnown RBP11.22□□□□□ -0.61
LAMA3-207ENST00000587184 CCDC30Q5VVM6 783 aa11.22□□□□□ -0.61
LAMA3-207ENST00000587184 NOB1Q9ULX3 412 aaKnown RBP11.22□□□□□ -0.61
LAMA3-207ENST00000587184 RIMS1Q86UR5 1692 aaKnown RBP11.22□□□□□ -0.61
LAMA3-207ENST00000587184 USP6P35125 1406 aa11.21□□□□□ -0.61
LAMA3-207ENST00000587184 BLMP54132 1417 aaPredicted RBP11.21□□□□□ -0.61
LAMA3-207ENST00000587184 PHACTR3Q96KR7 559 aa11.21□□□□□ -0.61
LAMA3-207ENST00000587184 SBNO1A3KN83 1393 aa11.21□□□□□ -0.61
LAMA3-207ENST00000587184 FER1L4A9Z1Z3 1794 aa11.21□□□□□ -0.61
LAMA3-207ENST00000587184 SETD1BQ9UPS6 1966 aaKnown RBP11.21□□□□□ -0.61
LAMA3-207ENST00000587184 IP6K1Q92551 441 aa11.21□□□□□ -0.61
LAMA3-207ENST00000587184 CFAP44Q96MT7 982 aa11.21□□□□□ -0.61
LAMA3-207ENST00000587184 EYA1Q99502 592 aa11.21□□□□□ -0.62
LAMA3-207ENST00000587184 FAM83GA6ND36 823 aa11.2□□□□□ -0.62
LAMA3-207ENST00000587184 APBB1O00213 710 aa11.2□□□□□ -0.62
LAMA3-207ENST00000587184 CHRNA2Q15822 529 aa11.2□□□□□ -0.62
LAMA3-207ENST00000587184 TSHZ2Q9NRE2 1034 aa11.2□□□□□ -0.62
LAMA3-207ENST00000587184 NUTM2BA6NNL0 878 aaPredicted RBP11.2□□□□□ -0.62
LAMA3-207ENST00000587184 NUTM2EB1AL46 878 aaPredicted RBP11.2□□□□□ -0.62
LAMA3-207ENST00000587184 ATF7IPQ6VMQ6 1270 aa11.2□□□□□ -0.62
LAMA3-207ENST00000587184 NUTM2AQ8IVF1 878 aaPredicted RBP11.2□□□□□ -0.62
LAMA3-207ENST00000587184 CASC1Q6TDU7 716 aa11.2□□□□□ -0.62
LAMA3-207ENST00000587184 CABLES1Q8TDN4 633 aa11.2□□□□□ -0.62
LAMA3-207ENST00000587184 POLR1AO95602 1720 aaPredicted RBP11.2□□□□□ -0.62
LAMA3-207ENST00000587184 MIS18AQ9NYP9 233 aa11.2□□□□□ -0.62
LAMA3-207ENST00000587184 SLAIN2Q9P270 581 aa11.2□□□□□ -0.62
LAMA3-207ENST00000587184 AATKQ6ZMQ8 1374 aa11.2□□□□□ -0.62
LAMA3-207ENST00000587184 SIGLEC1Q9BZZ2 1709 aa11.19□□□□□ -0.62
LAMA3-207ENST00000587184 SLC4A2P04920 1241 aa11.19□□□□□ -0.62
LAMA3-207ENST00000587184 CEP170BQ9Y4F5 1589 aaPredicted RBP11.19□□□□□ -0.62
LAMA3-207ENST00000587184 ANKARQ7Z5J8 1434 aa11.19□□□□□ -0.62
LAMA3-207ENST00000587184 HSP90AB1P08238 724 aaKnown RBP11.19□□□□□ -0.62
LAMA3-207ENST00000587184 TAF7Q15545 349 aaPredicted RBP11.19□□□□□ -0.62
LAMA3-207ENST00000587184 SSH1Q8WYL5 1049 aa11.19□□□□□ -0.62
LAMA3-207ENST00000587184 SYTL4Q96C24 671 aaPredicted RBP11.18□□□□□ -0.62
LAMA3-207ENST00000587184 HDGFL1Q5TGJ6 251 aa11.18□□□□□ -0.62
LAMA3-207ENST00000587184 DDX54Q8TDD1 881 aaKnown RBP11.18□□□□□ -0.62
LAMA3-207ENST00000587184 PTCH1Q13635 1447 aa11.18□□□□□ -0.62
LAMA3-207ENST00000587184 ALDH1L2Q3SY69 923 aa11.18□□□□□ -0.62
LAMA3-207ENST00000587184 TECPR2O15040 1411 aa11.18□□□□□ -0.62
LAMA3-207ENST00000587184 BTBD11A6QL63 1104 aa11.18□□□□□ -0.62
LAMA3-207ENST00000587184 DDX58O95786 925 aaKnown RBP11.18□□□□□ -0.62
LAMA3-207ENST00000587184 MEX3CQ5U5Q3 659 aaKnown RBP11.18□□□□□ -0.62
LAMA3-207ENST00000587184 TOM1O60784 492 aa11.17□□□□□ -0.62
LAMA3-207ENST00000587184 CABP4P57796 275 aa11.17□□□□□ -0.62
LAMA3-207ENST00000587184 DDX17Q92841 729 aaKnown RBP11.17□□□□□ -0.62
LAMA3-207ENST00000587184 MBIPQ9NS73 344 aa11.17□□□□□ -0.62
LAMA3-207ENST00000587184 MTHFSDQ2M296 383 aaKnown RBP11.17□□□□□ -0.62
LAMA3-207ENST00000587184 NCBP3Q53F19 620 aaKnown RBP11.17□□□□□ -0.62
LAMA3-207ENST00000587184 LRRC59Q96AG4 307 aaKnown RBP11.17□□□□□ -0.62
LAMA3-207ENST00000587184 NEXNQ0ZGT2 675 aa11.16□□□□□ -0.62
LAMA3-207ENST00000587184 C20orf194Q5TEA3 1177 aa11.16□□□□□ -0.62
LAMA3-207ENST00000587184 MPRIPQ6WCQ1 1025 aa11.16□□□□□ -0.62
LAMA3-207ENST00000587184 SPINK5Q9NQ38 1064 aaPredicted RBP11.16□□□□□ -0.62
LAMA3-207ENST00000587184 RBM19Q9Y4C8 960 aaKnown RBP11.16□□□□□ -0.62
LAMA3-207ENST00000587184 ADGRL3Q9HAR2 1447 aa11.16□□□□□ -0.62
LAMA3-207ENST00000587184 MVPQ14764 893 aaKnown RBP11.16□□□□□ -0.62
LAMA3-207ENST00000587184 HSP90AA1P07900 732 aaKnown RBP11.16□□□□□ -0.62
LAMA3-207ENST00000587184 PTPRUQ92729 1446 aa11.16□□□□□ -0.62
LAMA3-207ENST00000587184 LMTK3Q96Q04 1460 aa11.15□□□□□ -0.62
LAMA3-207ENST00000587184 HTATSF1O43719 755 aaKnown RBP11.15□□□□□ -0.62
LAMA3-207ENST00000587184 DDRGK1Q96HY6 314 aa11.15□□□□□ -0.62
LAMA3-207ENST00000587184 C9orf78Q9NZ63 289 aaPredicted RBP11.15□□□□□ -0.63
LAMA3-207ENST00000587184 ADAMTS2O95450 1211 aa11.14□□□□□ -0.63
LAMA3-207ENST00000587184 TRIM35Q9UPQ4 493 aa11.14□□□□□ -0.63
LAMA3-207ENST00000587184 ZNF335Q9H4Z2 1342 aaPredicted RBP11.14□□□□□ -0.63
LAMA3-207ENST00000587184 ANKRD45Q5TZF3 282 aa11.14□□□□□ -0.63
LAMA3-207ENST00000587184 CPSF1Q10570 1443 aaKnown RBP11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms