RNA–Protein interactions for RNA: ENST00000585352.5

ZNF559-203, Transcript of zinc finger protein 559, humanhuman

TSL 1 (best) BASIC

Gene ZNF559, Length 967 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF559-203ENST00000585352 KCNA6P17658 529 aa12.14□□□□□ -0.47
ZNF559-203ENST00000585352 TMC1Q8TDI8 760 aa12.14□□□□□ -0.47
ZNF559-203ENST00000585352 PLEKHH1Q9ULM0 1364 aa12.14□□□□□ -0.47
ZNF559-203ENST00000585352 NALCNQ8IZF0 1738 aa12.14□□□□□ -0.47
ZNF559-203ENST00000585352 WAPLQ7Z5K2 1190 aa12.13□□□□□ -0.47
ZNF559-203ENST00000585352 KTN1Q86UP2 1357 aaKnown RBP12.13□□□□□ -0.47
ZNF559-203ENST00000585352 ATP7BP35670 1465 aa12.13□□□□□ -0.47
ZNF559-203ENST00000585352 ANKARQ7Z5J8 1434 aa12.12□□□□□ -0.47
ZNF559-203ENST00000585352 C11orf95C9JLR9 678 aaPredicted RBP12.12□□□□□ -0.47
ZNF559-203ENST00000585352 WASLO00401 505 aaPredicted RBP12.12□□□□□ -0.47
ZNF559-203ENST00000585352 GPR153Q6NV75 609 aa12.12□□□□□ -0.47
ZNF559-203ENST00000585352 HDGFL2Q7Z4V5 671 aaPredicted RBP12.12□□□□□ -0.47
ZNF559-203ENST00000585352 TERF2IPQ9NYB0 399 aa12.12□□□□□ -0.47
ZNF559-203ENST00000585352 TOPAZ1Q8N9V7 1692 aa12.11□□□□□ -0.47
ZNF559-203ENST00000585352 ANKRD36BQ8N2N9 1353 aa12.11□□□□□ -0.47
ZNF559-203ENST00000585352 KNSTRNQ9Y448 316 aa12.11□□□□□ -0.47
ZNF559-203ENST00000585352 FMN2Q9NZ56 1722 aa12.11□□□□□ -0.47
ZNF559-203ENST00000585352 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.11□□□□□ -0.47
ZNF559-203ENST00000585352 USP32Q8NFA0 1604 aa12.11□□□□□ -0.47
ZNF559-203ENST00000585352 DCCP43146 1447 aa12.11□□□□□ -0.47
ZNF559-203ENST00000585352 NCOA3Q9Y6Q9 1424 aa12.11□□□□□ -0.47
ZNF559-203ENST00000585352 C2orf72A6NCS6 295 aa12.1□□□□□ -0.47
ZNF559-203ENST00000585352 PPP1R37O75864 691 aa12.1□□□□□ -0.47
ZNF559-203ENST00000585352 CDK19Q9BWU1 502 aa12.1□□□□□ -0.47
ZNF559-203ENST00000585352 PPIP5K1Q6PFW1 1433 aa12.1□□□□□ -0.47
ZNF559-203ENST00000585352 MSH6P52701 1360 aa12.09□□□□□ -0.47
ZNF559-203ENST00000585352 PROSER2Q86WR7 435 aaPredicted RBP12.09□□□□□ -0.47
ZNF559-203ENST00000585352 NSD2O96028 1365 aa12.08□□□□□ -0.48
ZNF559-203ENST00000585352 KRTAP3-3Q9BYR6 98 aa12.08□□□□□ -0.48
ZNF559-203ENST00000585352 KRTAP3-2Q9BYR7 98 aa12.08□□□□□ -0.48
ZNF559-203ENST00000585352 PANK3Q9H999 370 aa12.08□□□□□ -0.48
ZNF559-203ENST00000585352 NSD3Q9BZ95 1437 aa12.08□□□□□ -0.48
ZNF559-203ENST00000585352 ERBB3P21860 1342 aa12.08□□□□□ -0.48
ZNF559-203ENST00000585352 CGNL1Q0VF96 1302 aa12.07□□□□□ -0.48
ZNF559-203ENST00000585352 KIF1AQ12756 1690 aa12.06□□□□□ -0.48
ZNF559-203ENST00000585352 SPNS2Q8IVW8 549 aa12.06□□□□□ -0.48
ZNF559-203ENST00000585352 A0A1W2PP64 1363 aa12.05□□□□□ -0.48
ZNF559-203ENST00000585352 TMEM94Q12767 1356 aa12.05□□□□□ -0.48
ZNF559-203ENST00000585352 ATF3P18847 181 aa12.05□□□□□ -0.48
ZNF559-203ENST00000585352 TMC2Q8TDI7 906 aa12.05□□□□□ -0.48
ZNF559-203ENST00000585352 NUDT16Q96DE0 195 aaKnown RBP12.05□□□□□ -0.48
ZNF559-203ENST00000585352 MON2Q7Z3U7 1717 aa12.05□□□□□ -0.48
ZNF559-203ENST00000585352 NPC1L1Q9UHC9 1359 aa12.05□□□□□ -0.48
ZNF559-203ENST00000585352 KIF20BQ96Q89 1820 aa12.04□□□□□ -0.48
ZNF559-203ENST00000585352 EDC4Q6P2E9 1401 aaKnown RBP12.04□□□□□ -0.48
ZNF559-203ENST00000585352 SLC34A2O95436 690 aa12.04□□□□□ -0.48
ZNF559-203ENST00000585352 RALBP1Q15311 655 aa12.04□□□□□ -0.48
ZNF559-203ENST00000585352 RYDENQ9NUL5 291 aaKnown RBP12.04□□□□□ -0.48
ZNF559-203ENST00000585352 STRCP1A6NGW2 1772 aa12.04□□□□□ -0.48
ZNF559-203ENST00000585352 AKAP12Q02952 1782 aa12.04□□□□□ -0.48
ZNF559-203ENST00000585352 CADPS2Q86UW7 1296 aa12.03□□□□□ -0.48
ZNF559-203ENST00000585352 ANKRD26Q9UPS8 1709 aa12.03□□□□□ -0.48
ZNF559-203ENST00000585352 NKX1-1Q15270 411 aaPredicted RBP12.02□□□□□ -0.49
ZNF559-203ENST00000585352 ARSIQ5FYB1 569 aa12.02□□□□□ -0.49
ZNF559-203ENST00000585352 SLC12A5Q9H2X9 1139 aa12.02□□□□□ -0.49
ZNF559-203ENST00000585352 C19orf44Q9H6X5 657 aa12.02□□□□□ -0.49
ZNF559-203ENST00000585352 ZNF335Q9H4Z2 1342 aaPredicted RBP12.02□□□□□ -0.49
ZNF559-203ENST00000585352 CCER2I3L3R5 266 aa12.01□□□□□ -0.49
ZNF559-203ENST00000585352 CNGB1Q14028 1251 aaPredicted RBP12.01□□□□□ -0.49
ZNF559-203ENST00000585352 VARS2Q5ST30 1063 aaKnown RBP12.01□□□□□ -0.49
ZNF559-203ENST00000585352 NGDNQ8NEJ9 315 aaKnown RBP12.01□□□□□ -0.49
ZNF559-203ENST00000585352 PRKRIP1Q9H875 184 aaPredicted RBP12.01□□□□□ -0.49
ZNF559-203ENST00000585352 CABP1Q9NZU7 370 aa12.01□□□□□ -0.49
ZNF559-203ENST00000585352 MYBBP1AQ9BQG0 1328 aaKnown RBP12.01□□□□□ -0.49
ZNF559-203ENST00000585352 LRRC7Q96NW7 1537 aa12.01□□□□□ -0.49
ZNF559-203ENST00000585352 MMRN1Q13201 1228 aa12□□□□□ -0.49
ZNF559-203ENST00000585352 CC2D1BQ5T0F9 858 aaKnown RBP12□□□□□ -0.49
ZNF559-203ENST00000585352 BRD4O60885 1362 aaPredicted RBP12□□□□□ -0.49
ZNF559-203ENST00000585352 PARD3Q8TEW0 1356 aa12□□□□□ -0.49
ZNF559-203ENST00000585352 NRKQ7Z2Y5 1582 aa12□□□□□ -0.49
ZNF559-203ENST00000585352 NUTM2FA1L443 756 aa11.99□□□□□ -0.49
ZNF559-203ENST00000585352 PRR36Q9H6K5 1346 aa11.99□□□□□ -0.49
ZNF559-203ENST00000585352 USP6P35125 1406 aa11.99□□□□□ -0.49
ZNF559-203ENST00000585352 CD163L1Q9NR16 1453 aa11.98□□□□□ -0.49
ZNF559-203ENST00000585352 CPSF1Q10570 1443 aaKnown RBP11.98□□□□□ -0.49
ZNF559-203ENST00000585352 NLRP13Q86W25 1043 aa11.98□□□□□ -0.49
ZNF559-203ENST00000585352 RGPD8O14715 1765 aaPredicted RBP11.97□□□□□ -0.49
ZNF559-203ENST00000585352 C1orf167Q5SNV9 1468 aa11.97□□□□□ -0.49
ZNF559-203ENST00000585352 POLR3AO14802 1390 aaPredicted RBP11.97□□□□□ -0.49
ZNF559-203ENST00000585352 ACEP12821 1306 aa11.97□□□□□ -0.49
ZNF559-203ENST00000585352 TTC21AQ8NDW8 1320 aa11.97□□□□□ -0.49
ZNF559-203ENST00000585352 PLEKHG3A1L390 1219 aa11.97□□□□□ -0.49
ZNF559-203ENST00000585352 MORC1Q86VD1 984 aa11.97□□□□□ -0.49
ZNF559-203ENST00000585352 ZNF687Q8N1G0 1237 aa11.97□□□□□ -0.49
ZNF559-203ENST00000585352 MST1RQ04912 1400 aa11.96□□□□□ -0.49
ZNF559-203ENST00000585352 XIRP1Q702N8 1843 aaKnown RBP11.96□□□□□ -0.49
ZNF559-203ENST00000585352 ESCO1Q5FWF5 840 aa11.96□□□□□ -0.49
ZNF559-203ENST00000585352 AMER1Q5JTC6 1135 aaPredicted RBP11.96□□□□□ -0.49
ZNF559-203ENST00000585352 RBM33Q96EV2 1170 aaKnown RBP11.96□□□□□ -0.49
ZNF559-203ENST00000585352 MRS2Q9HD23 443 aa11.96□□□□□ -0.49
ZNF559-203ENST00000585352 PER1O15534 1290 aaPredicted RBP11.95□□□□□ -0.5
ZNF559-203ENST00000585352 FOXK1P85037 733 aa11.95□□□□□ -0.5
ZNF559-203ENST00000585352 GPHNQ9NQX3 736 aaPredicted RBP11.95□□□□□ -0.5
ZNF559-203ENST00000585352 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.94□□□□□ -0.57e-6■■□□□ 11.5
ZNF559-203ENST00000585352 PMFBP1Q8TBY8 1022 aa11.94□□□□□ -0.5
ZNF559-203ENST00000585352 KHSRPQ92945 711 aaKnown RBP eCLIP11.94□□□□□ -0.5
ZNF559-203ENST00000585352 COG3Q96JB2 828 aa11.94□□□□□ -0.5
ZNF559-203ENST00000585352 CFAP53Q96M91 514 aa11.94□□□□□ -0.5
ZNF559-203ENST00000585352 NPHP3Q7Z494 1330 aa11.93□□□□□ -0.5
ZNF559-203ENST00000585352 CARD14Q9BXL6 1004 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms