RNA–Protein interactions for RNA: ENST00000585163.5

CDK5RAP3-237, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,519 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-237ENST00000585163 CDK12Q9NYV4 1490 aaPredicted RBP17.83■□□□□ 0.44
CDK5RAP3-237ENST00000585163 ZNF853P0CG23 659 aa17.83■□□□□ 0.44
CDK5RAP3-237ENST00000585163 PKNOX2Q96KN3 472 aa17.83■□□□□ 0.44
CDK5RAP3-237ENST00000585163 THUMPD2Q9BTF0 503 aaKnown RBP17.83■□□□□ 0.44
CDK5RAP3-237ENST00000585163 BMP2KLQ5H9B9 411 aa17.82■□□□□ 0.44
CDK5RAP3-237ENST00000585163 GCC1Q96CN9 775 aa17.82■□□□□ 0.44
CDK5RAP3-237ENST00000585163 EMILIN1Q9Y6C2 1016 aa17.82■□□□□ 0.44
CDK5RAP3-237ENST00000585163 RIMS2Q9UQ26 1411 aa17.82■□□□□ 0.44
CDK5RAP3-237ENST00000585163 HSCBQ8IWL3 235 aa17.82■□□□□ 0.44
CDK5RAP3-237ENST00000585163 TSPYL6Q8N831 410 aa17.82■□□□□ 0.44
CDK5RAP3-237ENST00000585163 REREQ9P2R6 1566 aa17.82■□□□□ 0.44
CDK5RAP3-237ENST00000585163 AATKQ6ZMQ8 1374 aa17.82■□□□□ 0.44
CDK5RAP3-237ENST00000585163 L1TD1Q5T7N2 865 aaKnown RBP17.81■□□□□ 0.44
CDK5RAP3-237ENST00000585163 SPATA31D1Q6ZQQ2 1576 aa17.81■□□□□ 0.44
CDK5RAP3-237ENST00000585163 AGLP35573 1532 aa17.81■□□□□ 0.44
CDK5RAP3-237ENST00000585163 NCOA3Q9Y6Q9 1424 aa17.81■□□□□ 0.44
CDK5RAP3-237ENST00000585163 MBIPQ9NS73 344 aa17.8■□□□□ 0.44
CDK5RAP3-237ENST00000585163 WASLO00401 505 aaPredicted RBP17.8■□□□□ 0.44
CDK5RAP3-237ENST00000585163 SNX21Q969T3 373 aa17.8■□□□□ 0.44
CDK5RAP3-237ENST00000585163 ABCC4O15439 1325 aa17.8■□□□□ 0.44
CDK5RAP3-237ENST00000585163 NME9Q86XW9 330 aa17.79■□□□□ 0.44
CDK5RAP3-237ENST00000585163 ZNF692Q9BU19 519 aaPredicted RBP17.79■□□□□ 0.44
CDK5RAP3-237ENST00000585163 ANKRD45Q5TZF3 282 aa17.78■□□□□ 0.44
CDK5RAP3-237ENST00000585163 FAM43AQ8N2R8 423 aa17.78■□□□□ 0.44
CDK5RAP3-237ENST00000585163 CFAP44Q96MT7 982 aa17.78■□□□□ 0.44
CDK5RAP3-237ENST00000585163 LMOD3Q0VAK6 560 aa17.78■□□□□ 0.44
CDK5RAP3-237ENST00000585163 DDIT3P35638 169 aa17.77■□□□□ 0.44
CDK5RAP3-237ENST00000585163 TWISTNBQ3B726 338 aaPredicted RBP17.77■□□□□ 0.44
CDK5RAP3-237ENST00000585163 DLG5Q8TDM6 1919 aa17.77■□□□□ 0.44
CDK5RAP3-237ENST00000585163 SIRT2Q8IXJ6 389 aa17.77■□□□□ 0.44
CDK5RAP3-237ENST00000585163 C1orf115Q9H7X2 142 aa17.77■□□□□ 0.44
CDK5RAP3-237ENST00000585163 NRXN3Q9Y4C0 1643 aa17.77■□□□□ 0.44
CDK5RAP3-237ENST00000585163 ELL2O00472 640 aaPredicted RBP17.76■□□□□ 0.43
CDK5RAP3-237ENST00000585163 ZRANB1Q9UGI0 708 aa17.76■□□□□ 0.43
CDK5RAP3-237ENST00000585163 MON2Q7Z3U7 1717 aa17.75■□□□□ 0.43
CDK5RAP3-237ENST00000585163 FSD2A1L4K1 749 aa17.75■□□□□ 0.43
CDK5RAP3-237ENST00000585163 C8orf58Q8NAV2 365 aa17.75■□□□□ 0.43
CDK5RAP3-237ENST00000585163 COG3Q96JB2 828 aa17.75■□□□□ 0.43
CDK5RAP3-237ENST00000585163 METP08581 1390 aa17.75■□□□□ 0.43
CDK5RAP3-237ENST00000585163 NUDT16Q96DE0 195 aaKnown RBP17.74■□□□□ 0.43
CDK5RAP3-237ENST00000585163 CPS1P31327 1500 aa17.74■□□□□ 0.43
CDK5RAP3-237ENST00000585163 KIF2CQ99661 725 aa17.74■□□□□ 0.43
CDK5RAP3-237ENST00000585163 API5Q9BZZ5 524 aaKnown RBP17.74■□□□□ 0.43
CDK5RAP3-237ENST00000585163 TRAK2O60296 914 aa17.73■□□□□ 0.43
CDK5RAP3-237ENST00000585163 CCDC61Q9Y6R9 512 aa17.73■□□□□ 0.43
CDK5RAP3-237ENST00000585163 GOLGA6L3A6NEY3 463 aa17.73■□□□□ 0.43
CDK5RAP3-237ENST00000585163 KIF24Q5T7B8 1368 aa17.73■□□□□ 0.43
CDK5RAP3-237ENST00000585163 FAM69CQ0P6D2 419 aa17.72■□□□□ 0.43
CDK5RAP3-237ENST00000585163 RRS1Q15050 365 aaKnown RBP17.72■□□□□ 0.43
CDK5RAP3-237ENST00000585163 TBC1D9Q6ZT07 1266 aa17.72■□□□□ 0.43
CDK5RAP3-237ENST00000585163 DDX11L8A8MPP1 907 aa17.72■□□□□ 0.43
CDK5RAP3-237ENST00000585163 TXNDC2Q86VQ3 553 aa17.72■□□□□ 0.43
CDK5RAP3-237ENST00000585163 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.72■□□□□ 0.43
CDK5RAP3-237ENST00000585163 SIRT1Q96EB6 747 aa17.72■□□□□ 0.43
CDK5RAP3-237ENST00000585163 C3P01024 1663 aa17.72■□□□□ 0.43
CDK5RAP3-237ENST00000585163 FAM83GA6ND36 823 aa17.71■□□□□ 0.43
CDK5RAP3-237ENST00000585163 CIZ1Q9ULV3 898 aaPredicted RBP17.71■□□□□ 0.43
CDK5RAP3-237ENST00000585163 TECPR2O15040 1411 aa17.71■□□□□ 0.43
CDK5RAP3-237ENST00000585163 KNDC1Q76NI1 1749 aa17.71■□□□□ 0.43
CDK5RAP3-237ENST00000585163 XRCC6P12956 609 aaKnown RBP eCLIP17.71■□□□□ 0.43
CDK5RAP3-237ENST00000585163 DIP2BQ9P265 1576 aa17.71■□□□□ 0.43
CDK5RAP3-237ENST00000585163 AKAP12Q02952 1782 aa17.71■□□□□ 0.43
CDK5RAP3-237ENST00000585163 NCKAP5LQ9HCH0 1330 aa17.71■□□□□ 0.42
CDK5RAP3-237ENST00000585163 GZF1Q9H116 711 aaPredicted RBP17.7■□□□□ 0.42
CDK5RAP3-237ENST00000585163 CYB5RLQ6IPT4 315 aa17.69■□□□□ 0.42
CDK5RAP3-237ENST00000585163 HSP90AB1P08238 724 aaKnown RBP17.69■□□□□ 0.42
CDK5RAP3-237ENST00000585163 DCTN1Q14203 1278 aa17.68■□□□□ 0.42
CDK5RAP3-237ENST00000585163 ITSN1Q15811 1721 aa17.68■□□□□ 0.42
CDK5RAP3-237ENST00000585163 NRKQ7Z2Y5 1582 aa17.68■□□□□ 0.42
CDK5RAP3-237ENST00000585163 DCTPP1Q9H773 170 aa17.67■□□□□ 0.42
CDK5RAP3-237ENST00000585163 CDC45O75419 566 aa17.67■□□□□ 0.42
CDK5RAP3-237ENST00000585163 INTS3Q68E01 1043 aaKnown RBP17.67■□□□□ 0.42
CDK5RAP3-237ENST00000585163 TNPO1Q92973 898 aaKnown RBP17.67■□□□□ 0.42
CDK5RAP3-237ENST00000585163 TSPOAP1O95153 1857 aa17.67■□□□□ 0.42
CDK5RAP3-237ENST00000585163 CD2BP2O95400 341 aaKnown RBP17.66■□□□□ 0.42
CDK5RAP3-237ENST00000585163 RAB3GAP1Q15042 981 aa17.66■□□□□ 0.42
CDK5RAP3-237ENST00000585163 MLECQ14165 292 aa17.66■□□□□ 0.42
CDK5RAP3-237ENST00000585163 K7ELQ4 463 aaPredicted RBP17.65■□□□□ 0.42
CDK5RAP3-237ENST00000585163 GSPT1P15170 499 aaKnown RBP17.65■□□□□ 0.42
CDK5RAP3-237ENST00000585163 HAP1P54257 671 aaPredicted RBP17.65■□□□□ 0.42
CDK5RAP3-237ENST00000585163 PLEKHM2Q8IWE5 1019 aa17.65■□□□□ 0.42
CDK5RAP3-237ENST00000585163 PRR36Q9H6K5 1346 aa17.65■□□□□ 0.42
CDK5RAP3-237ENST00000585163 EIF4A2Q14240 407 aaKnown RBP17.64■□□□□ 0.41
CDK5RAP3-237ENST00000585163 RGS12O14924 1447 aa17.64■□□□□ 0.41
CDK5RAP3-237ENST00000585163 AEBP1Q8IUX7 1158 aa17.64■□□□□ 0.41
CDK5RAP3-237ENST00000585163 GBP4Q96PP9 640 aa17.64■□□□□ 0.41
CDK5RAP3-237ENST00000585163 ARXQ96QS3 562 aa17.64■□□□□ 0.41
CDK5RAP3-237ENST00000585163 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.64■□□□□ 0.41
CDK5RAP3-237ENST00000585163 CHL1O00533 1208 aa17.63■□□□□ 0.41
CDK5RAP3-237ENST00000585163 MRE11P49959 708 aa17.63■□□□□ 0.41
CDK5RAP3-237ENST00000585163 HDGFP51858 240 aaKnown RBP17.63■□□□□ 0.41
CDK5RAP3-237ENST00000585163 SULT6B1Q6IMI4 303 aa17.63■□□□□ 0.41
CDK5RAP3-237ENST00000585163 ISY1Q9ULR0 285 aaKnown RBP17.63■□□□□ 0.41
CDK5RAP3-237ENST00000585163 ATP10DQ9P241 1426 aa17.63■□□□□ 0.41
CDK5RAP3-237ENST00000585163 ANKRD44Q8N8A2 993 aa17.63■□□□□ 0.41
CDK5RAP3-237ENST00000585163 KIAA0232Q92628 1395 aa17.62■□□□□ 0.41
CDK5RAP3-237ENST00000585163 RBM42Q9BTD8 480 aaKnown RBP17.62■□□□□ 0.41
CDK5RAP3-237ENST00000585163 PANK2Q9BZ23 570 aa17.62■□□□□ 0.41
CDK5RAP3-237ENST00000585163 HSP90AA1P07900 732 aaKnown RBP17.62■□□□□ 0.41
CDK5RAP3-237ENST00000585163 RRAGDQ9NQL2 400 aaPredicted RBP17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms