RNA–Protein interactions for RNA: ENST00000584655.5

RFFL-212, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 2 BASIC

Gene RFFL, Length 4,039 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-212ENST00000584655 ALKQ9UM73 1620 aa13.03□□□□□ -0.32
RFFL-212ENST00000584655 PLEKHF1Q96S99 279 aa13.03□□□□□ -0.32
RFFL-212ENST00000584655 ABCC11Q96J66 1382 aa13.02□□□□□ -0.32
RFFL-212ENST00000584655 SBNO2Q9Y2G9 1366 aa13.02□□□□□ -0.32
RFFL-212ENST00000584655 NOP58Q9Y2X3 529 aaKnown RBP13.02□□□□□ -0.32
RFFL-212ENST00000584655 POLR3AO14802 1390 aaPredicted RBP13.02□□□□□ -0.32
RFFL-212ENST00000584655 DTNBO60941 627 aa13.02□□□□□ -0.33
RFFL-212ENST00000584655 TEFQ10587 303 aa13.02□□□□□ -0.33
RFFL-212ENST00000584655 ZNF530Q6P9A1 599 aaPredicted RBP13.02□□□□□ -0.33
RFFL-212ENST00000584655 ATF7IPQ6VMQ6 1270 aa13.02□□□□□ -0.33
RFFL-212ENST00000584655 NOL8Q76FK4 1167 aaKnown RBP13.02□□□□□ -0.33
RFFL-212ENST00000584655 MYL6BP14649 208 aa13.02□□□□□ -0.33
RFFL-212ENST00000584655 ADAMTS2O95450 1211 aa13.01□□□□□ -0.33
RFFL-212ENST00000584655 NBPF6Q5VWK0 638 aa13.01□□□□□ -0.33
RFFL-212ENST00000584655 NBPF4Q96M43 638 aa13.01□□□□□ -0.33
RFFL-212ENST00000584655 ZNF521Q96K83 1311 aa13.01□□□□□ -0.33
RFFL-212ENST00000584655 PPP6R1Q9UPN7 881 aa13.01□□□□□ -0.33
RFFL-212ENST00000584655 TBX22Q9Y458 520 aa13.01□□□□□ -0.33
RFFL-212ENST00000584655 NKTRP30414 1462 aaKnown RBP13.01□□□□□ -0.33
RFFL-212ENST00000584655 ADGRB1O14514 1584 aa13.01□□□□□ -0.33
RFFL-212ENST00000584655 PTPRMP28827 1452 aa13□□□□□ -0.33
RFFL-212ENST00000584655 PRAMEF22A3QJZ6 481 aa13□□□□□ -0.33
RFFL-212ENST00000584655 KDM5AP29375 1690 aaKnown RBP13□□□□□ -0.33
RFFL-212ENST00000584655 VWDEQ8N2E2 1590 aa13□□□□□ -0.33
RFFL-212ENST00000584655 PTCD1O75127 700 aaKnown RBP13□□□□□ -0.33
RFFL-212ENST00000584655 WDR63Q8IWG1 891 aa13□□□□□ -0.33
RFFL-212ENST00000584655 PTPRUQ92729 1446 aa13□□□□□ -0.33
RFFL-212ENST00000584655 PNNQ9H307 717 aaKnown RBP13□□□□□ -0.33
RFFL-212ENST00000584655 C16orf71Q8IYS4 520 aaPredicted RBP12.99□□□□□ -0.33
RFFL-212ENST00000584655 GNAI1P63096 354 aa12.99□□□□□ -0.33
RFFL-212ENST00000584655 CENPQQ7L2Z9 268 aaPredicted RBP12.99□□□□□ -0.33
RFFL-212ENST00000584655 RICTORQ6R327 1708 aa12.99□□□□□ -0.33
RFFL-212ENST00000584655 MAP4K4O95819 1239 aaPredicted RBP12.99□□□□□ -0.33
RFFL-212ENST00000584655 GCP02774 474 aa12.98□□□□□ -0.33
RFFL-212ENST00000584655 CCDC85AQ96PX6 553 aaPredicted RBP12.98□□□□□ -0.33
RFFL-212ENST00000584655 AXIN2Q9Y2T1 843 aa12.98□□□□□ -0.33
RFFL-212ENST00000584655 BLMP54132 1417 aaPredicted RBP12.98□□□□□ -0.33
RFFL-212ENST00000584655 MVPQ14764 893 aaKnown RBP12.98□□□□□ -0.33
RFFL-212ENST00000584655 STK31Q9BXU1 1019 aa12.98□□□□□ -0.33
RFFL-212ENST00000584655 FAM177BA6PVY3 158 aa12.97□□□□□ -0.33
RFFL-212ENST00000584655 RWDD1Q9H446 243 aaPredicted RBP12.97□□□□□ -0.33
RFFL-212ENST00000584655 ZNF335Q9H4Z2 1342 aaPredicted RBP12.97□□□□□ -0.33
RFFL-212ENST00000584655 IPO8O15397 1037 aaKnown RBP12.97□□□□□ -0.33
RFFL-212ENST00000584655 EXOC6BQ9Y2D4 811 aa12.97□□□□□ -0.33
RFFL-212ENST00000584655 CFAP74Q9C0B2 1584 aa12.97□□□□□ -0.33
RFFL-212ENST00000584655 ARHGAP31Q2M1Z3 1444 aa12.97□□□□□ -0.33
RFFL-212ENST00000584655 HOXC9P31274 260 aa12.97□□□□□ -0.33
RFFL-212ENST00000584655 DEKP35659 375 aaKnown RBP12.97□□□□□ -0.33
RFFL-212ENST00000584655 EVA1CP58658 441 aa12.97□□□□□ -0.33
RFFL-212ENST00000584655 QRICH2Q9H0J4 1663 aa12.97□□□□□ -0.33
RFFL-212ENST00000584655 DEPDC5O75140 1603 aa12.97□□□□□ -0.33
RFFL-212ENST00000584655 VAMP4O75379 141 aa12.97□□□□□ -0.33
RFFL-212ENST00000584655 ERICH6BQ5W0A0 696 aa12.97□□□□□ -0.33
RFFL-212ENST00000584655 PHAXQ9H814 394 aaKnown RBP12.97□□□□□ -0.33
RFFL-212ENST00000584655 CPS1P31327 1500 aa12.96□□□□□ -0.33
RFFL-212ENST00000584655 PRDM11Q9NQV5 511 aa12.96□□□□□ -0.33
RFFL-212ENST00000584655 UTRNP46939 3433 aa12.96□□□□□ -0.33
RFFL-212ENST00000584655 KDM4FA0A1W2PPD8 638 aa12.96□□□□□ -0.34
RFFL-212ENST00000584655 C1orf141Q5JVX7 400 aa12.96□□□□□ -0.34
RFFL-212ENST00000584655 MEIS3Q99687 375 aa12.96□□□□□ -0.34
RFFL-212ENST00000584655 CHMP3Q9Y3E7 222 aa12.96□□□□□ -0.34
RFFL-212ENST00000584655 ANKRD24Q8TF21 1146 aa12.95□□□□□ -0.34
RFFL-212ENST00000584655 IL1RAPL2Q9NP60 686 aa12.95□□□□□ -0.34
RFFL-212ENST00000584655 OS9Q13438 667 aaPredicted RBP12.95□□□□□ -0.34
RFFL-212ENST00000584655 TOM1L2Q6ZVM7 507 aa12.95□□□□□ -0.34
RFFL-212ENST00000584655 BACH2Q9BYV9 841 aa12.95□□□□□ -0.34
RFFL-212ENST00000584655 HDGFL1Q5TGJ6 251 aa12.95□□□□□ -0.34
RFFL-212ENST00000584655 OTUD7AQ8TE49 926 aaPredicted RBP12.95□□□□□ -0.34
RFFL-212ENST00000584655 ADAMTS13Q76LX8 1427 aa12.94□□□□□ -0.34
RFFL-212ENST00000584655 RNF123Q5XPI4 1314 aa12.94□□□□□ -0.34
RFFL-212ENST00000584655 HSP90AA1P07900 732 aaKnown RBP12.94□□□□□ -0.34
RFFL-212ENST00000584655 FOXD4L5Q5VV16 416 aaPredicted RBP12.94□□□□□ -0.34
RFFL-212ENST00000584655 FOXD4L4Q8WXT5 416 aaPredicted RBP12.94□□□□□ -0.34
RFFL-212ENST00000584655 RAPGEF4Q8WZA2 1011 aa12.94□□□□□ -0.34
RFFL-212ENST00000584655 LMTK2Q8IWU2 1503 aa12.93□□□□□ -0.34
RFFL-212ENST00000584655 IPO9Q96P70 1041 aaKnown RBP12.93□□□□□ -0.34
RFFL-212ENST00000584655 PREX1Q8TCU6 1659 aa12.93□□□□□ -0.34
RFFL-212ENST00000584655 FOXD4L6Q3SYB3 417 aaPredicted RBP12.92□□□□□ -0.34
RFFL-212ENST00000584655 FOXD4L3Q6VB84 417 aaPredicted RBP12.92□□□□□ -0.34
RFFL-212ENST00000584655 ZMYM4Q5VZL5 1548 aa12.92□□□□□ -0.34
RFFL-212ENST00000584655 IL17REQ8NFR9 667 aa12.92□□□□□ -0.34
RFFL-212ENST00000584655 SIL1Q9H173 461 aa12.92□□□□□ -0.34
RFFL-212ENST00000584655 IQGAP1P46940 1657 aa12.92□□□□□ -0.34
RFFL-212ENST00000584655 GNAT3A8MTJ3 354 aa12.91□□□□□ -0.34
RFFL-212ENST00000584655 CFAP44Q96MT7 982 aa12.91□□□□□ -0.34
RFFL-212ENST00000584655 DDX19BQ9UMR2 479 aa12.91□□□□□ -0.34
RFFL-212ENST00000584655 ARHGEF40Q8TER5 1519 aa12.91□□□□□ -0.34
RFFL-212ENST00000584655 TMEM131LA2VDJ0 1609 aa12.91□□□□□ -0.34
RFFL-212ENST00000584655 FAM161AQ3B820 660 aa12.91□□□□□ -0.34
RFFL-212ENST00000584655 BTBD11A6QL63 1104 aa12.91□□□□□ -0.34
RFFL-212ENST00000584655 PDE3AQ14432 1141 aa12.91□□□□□ -0.34
RFFL-212ENST00000584655 UPF2Q9HAU5 1272 aaKnown RBP12.91□□□□□ -0.34
RFFL-212ENST00000584655 LMOD3Q0VAK6 560 aa12.91□□□□□ -0.34
RFFL-212ENST00000584655 TRMT2AQ8IZ69 625 aaKnown RBP12.91□□□□□ -0.34
RFFL-212ENST00000584655 RILPL2Q969X0 211 aa12.91□□□□□ -0.34
RFFL-212ENST00000584655 CD163L1Q9NR16 1453 aa12.91□□□□□ -0.34
RFFL-212ENST00000584655 PLEKHG3A1L390 1219 aa12.9□□□□□ -0.34
RFFL-212ENST00000584655 TRIM6-TRIM34B2RNG4 842 aa12.9□□□□□ -0.34
RFFL-212ENST00000584655 NFATC2IPQ8NCF5 419 aa12.9□□□□□ -0.34
RFFL-212ENST00000584655 INSRP06213 1382 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms