RNA–Protein interactions for RNA: ENST00000584063.5

CDK5RAP3-231, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,759 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-231ENST00000584063 RLBP1P12271 317 aa14.72□□□□□ -0.05
CDK5RAP3-231ENST00000584063 TERF2IPQ9NYB0 399 aa14.72□□□□□ -0.05
CDK5RAP3-231ENST00000584063 C3P01024 1663 aa14.71□□□□□ -0.05
CDK5RAP3-231ENST00000584063 QRICH2Q9H0J4 1663 aa14.71□□□□□ -0.05
CDK5RAP3-231ENST00000584063 ANAPC15P60006 121 aa14.71□□□□□ -0.05
CDK5RAP3-231ENST00000584063 THEMISQ8N1K5 641 aaPredicted RBP14.71□□□□□ -0.05
CDK5RAP3-231ENST00000584063 CC2D2BQ6DHV5 1058 aa14.71□□□□□ -0.06
CDK5RAP3-231ENST00000584063 POLR3AO14802 1390 aaPredicted RBP14.7□□□□□ -0.06
CDK5RAP3-231ENST00000584063 U2AF1L5P0DN76 240 aaPredicted RBP14.7□□□□□ -0.06
CDK5RAP3-231ENST00000584063 U2AF1Q01081 240 aaKnown RBP eCLIP14.7□□□□□ -0.066e-9■■■□□ 17
CDK5RAP3-231ENST00000584063 CCDC27Q2M243 656 aa14.7□□□□□ -0.06
CDK5RAP3-231ENST00000584063 HDGFL2Q7Z4V5 671 aaPredicted RBP14.7□□□□□ -0.06
CDK5RAP3-231ENST00000584063 RIMS1Q86UR5 1692 aaKnown RBP14.7□□□□□ -0.06
CDK5RAP3-231ENST00000584063 TULP4Q9NRJ4 1543 aa14.69□□□□□ -0.06
CDK5RAP3-231ENST00000584063 TSR2Q969E8 191 aaKnown RBP14.69□□□□□ -0.06
CDK5RAP3-231ENST00000584063 A0A1W2PP64 1363 aa14.69□□□□□ -0.06
CDK5RAP3-231ENST00000584063 SHPRHQ149N8 1683 aa14.68□□□□□ -0.06
CDK5RAP3-231ENST00000584063 U2SURPO15042 1029 aaKnown RBP14.68□□□□□ -0.06
CDK5RAP3-231ENST00000584063 PTMAP06454 111 aaKnown RBP14.68□□□□□ -0.06
CDK5RAP3-231ENST00000584063 AMOTL2Q9Y2J4 779 aa14.68□□□□□ -0.06
CDK5RAP3-231ENST00000584063 SOX12O15370 315 aa14.68□□□□□ -0.06
CDK5RAP3-231ENST00000584063 KCTD17Q8N5Z5 321 aa14.68□□□□□ -0.06
CDK5RAP3-231ENST00000584063 RUNDC1Q96C34 613 aa14.68□□□□□ -0.06
CDK5RAP3-231ENST00000584063 PTPRMP28827 1452 aa14.68□□□□□ -0.06
CDK5RAP3-231ENST00000584063 MYO3AQ8NEV4 1616 aa14.67□□□□□ -0.06
CDK5RAP3-231ENST00000584063 WASLO00401 505 aaPredicted RBP14.67□□□□□ -0.06
CDK5RAP3-231ENST00000584063 RARSP54136 660 aaKnown RBP14.66□□□□□ -0.06
CDK5RAP3-231ENST00000584063 NUDT16Q96DE0 195 aaKnown RBP14.66□□□□□ -0.06
CDK5RAP3-231ENST00000584063 PIAS4Q8N2W9 510 aaPredicted RBP14.66□□□□□ -0.06
CDK5RAP3-231ENST00000584063 FYB1O15117 783 aa14.65□□□□□ -0.06
CDK5RAP3-231ENST00000584063 MCCP23508 829 aa14.65□□□□□ -0.06
CDK5RAP3-231ENST00000584063 ANKRD36BQ8N2N9 1353 aa14.65□□□□□ -0.06
CDK5RAP3-231ENST00000584063 PCDHB15Q9Y5E8 787 aa14.65□□□□□ -0.06
CDK5RAP3-231ENST00000584063 UBR1Q8IWV7 1749 aa14.64□□□□□ -0.07
CDK5RAP3-231ENST00000584063 ARHGEF28Q8N1W1 1705 aaKnown RBP14.64□□□□□ -0.07
CDK5RAP3-231ENST00000584063 ATAD2Q6PL18 1390 aa14.64□□□□□ -0.07
CDK5RAP3-231ENST00000584063 ABCC11Q96J66 1382 aa14.64□□□□□ -0.07
CDK5RAP3-231ENST00000584063 GPATCH11Q8N954 259 aa14.64□□□□□ -0.07
CDK5RAP3-231ENST00000584063 PMFBP1Q8TBY8 1022 aa14.64□□□□□ -0.07
CDK5RAP3-231ENST00000584063 ZRANB1Q9UGI0 708 aa14.64□□□□□ -0.07
CDK5RAP3-231ENST00000584063 ROBO2Q9HCK4 1378 aa14.63□□□□□ -0.07
CDK5RAP3-231ENST00000584063 USP19O94966 1318 aa14.63□□□□□ -0.07
CDK5RAP3-231ENST00000584063 CFAP53Q96M91 514 aa14.62□□□□□ -0.07
CDK5RAP3-231ENST00000584063 CCDC61Q9Y6R9 512 aa14.62□□□□□ -0.07
CDK5RAP3-231ENST00000584063 IQSEC2Q5JU85 1478 aa14.62□□□□□ -0.07
CDK5RAP3-231ENST00000584063 NME9Q86XW9 330 aa14.62□□□□□ -0.07
CDK5RAP3-231ENST00000584063 ZNF830Q96NB3 372 aaPredicted RBP14.61□□□□□ -0.07
CDK5RAP3-231ENST00000584063 GZF1Q9H116 711 aaPredicted RBP14.61□□□□□ -0.07
CDK5RAP3-231ENST00000584063 KCNA6P17658 529 aa14.6□□□□□ -0.07
CDK5RAP3-231ENST00000584063 ANKLE2Q86XL3 938 aa14.6□□□□□ -0.07
CDK5RAP3-231ENST00000584063 NRXN3Q9Y4C0 1643 aa14.59□□□□□ -0.07
CDK5RAP3-231ENST00000584063 RGS22Q8NE09 1264 aa14.59□□□□□ -0.07
CDK5RAP3-231ENST00000584063 DNAJC2Q99543 621 aaKnown RBP14.59□□□□□ -0.07
CDK5RAP3-231ENST00000584063 PDZRN3Q9UPQ7 1066 aa14.59□□□□□ -0.07
CDK5RAP3-231ENST00000584063 NLRP1Q9C000 1473 aa14.59□□□□□ -0.07
CDK5RAP3-231ENST00000584063 EXOSC9Q06265 439 aaKnown RBP14.59□□□□□ -0.07
CDK5RAP3-231ENST00000584063 ADAMTS13Q76LX8 1427 aa14.59□□□□□ -0.07
CDK5RAP3-231ENST00000584063 PDE3AQ14432 1141 aa14.58□□□□□ -0.08
CDK5RAP3-231ENST00000584063 PRDM4Q9UKN5 801 aa14.58□□□□□ -0.08
CDK5RAP3-231ENST00000584063 PPIP5K1Q6PFW1 1433 aa14.58□□□□□ -0.08
CDK5RAP3-231ENST00000584063 PLEKHG1Q9ULL1 1385 aa14.58□□□□□ -0.08
CDK5RAP3-231ENST00000584063 PRR36Q9H6K5 1346 aa14.57□□□□□ -0.08
CDK5RAP3-231ENST00000584063 RRS1Q15050 365 aaKnown RBP14.56□□□□□ -0.08
CDK5RAP3-231ENST00000584063 TRIM35Q9UPQ4 493 aa14.56□□□□□ -0.08
CDK5RAP3-231ENST00000584063 SETQ01105 290 aaPredicted RBP14.56□□□□□ -0.08
CDK5RAP3-231ENST00000584063 NGDNQ8NEJ9 315 aaKnown RBP14.56□□□□□ -0.08
CDK5RAP3-231ENST00000584063 THUMPD2Q9BTF0 503 aaKnown RBP14.56□□□□□ -0.08
CDK5RAP3-231ENST00000584063 TBX22Q9Y458 520 aa14.56□□□□□ -0.08
CDK5RAP3-231ENST00000584063 NUTM2GQ5VZR2 741 aa14.56□□□□□ -0.08
CDK5RAP3-231ENST00000584063 MFAP1P55081 439 aaKnown RBP14.55□□□□□ -0.08
CDK5RAP3-231ENST00000584063 PLEKHF1Q96S99 279 aa14.55□□□□□ -0.08
CDK5RAP3-231ENST00000584063 TMPOP42166 694 aaKnown RBP14.55□□□□□ -0.08
CDK5RAP3-231ENST00000584063 WDR63Q8IWG1 891 aa14.55□□□□□ -0.08
CDK5RAP3-231ENST00000584063 EMILIN1Q9Y6C2 1016 aa14.55□□□□□ -0.08
CDK5RAP3-231ENST00000584063 CD163L1Q9NR16 1453 aa14.54□□□□□ -0.08
CDK5RAP3-231ENST00000584063 HMOX1P09601 288 aa14.54□□□□□ -0.08
CDK5RAP3-231ENST00000584063 HSPA2P54652 639 aa14.54□□□□□ -0.08
CDK5RAP3-231ENST00000584063 SSH1Q8WYL5 1049 aa14.54□□□□□ -0.08
CDK5RAP3-231ENST00000584063 COG3Q96JB2 828 aa14.54□□□□□ -0.08
CDK5RAP3-231ENST00000584063 SMC4Q9NTJ3 1288 aa14.54□□□□□ -0.08
CDK5RAP3-231ENST00000584063 ACEP12821 1306 aa14.54□□□□□ -0.08
CDK5RAP3-231ENST00000584063 PTPRUQ92729 1446 aa14.54□□□□□ -0.08
CDK5RAP3-231ENST00000584063 SETD1AO15047 1707 aaKnown RBP14.53□□□□□ -0.08
CDK5RAP3-231ENST00000584063 ADAMTSL3P82987 1691 aa14.53□□□□□ -0.08
CDK5RAP3-231ENST00000584063 HSP90AA2PQ14568 343 aaPredicted RBP14.53□□□□□ -0.08
CDK5RAP3-231ENST00000584063 NINLQ9Y2I6 1382 aa14.53□□□□□ -0.08
CDK5RAP3-231ENST00000584063 RIPK4P57078 832 aa14.52□□□□□ -0.08
CDK5RAP3-231ENST00000584063 CEP170BQ9Y4F5 1589 aaPredicted RBP14.52□□□□□ -0.08
CDK5RAP3-231ENST00000584063 TBC1D2Q9BYX2 928 aa14.52□□□□□ -0.09
CDK5RAP3-231ENST00000584063 TRIM27P14373 513 aa14.51□□□□□ -0.09
CDK5RAP3-231ENST00000584063 MAPK8IP3Q9UPT6 1336 aa14.51□□□□□ -0.09
CDK5RAP3-231ENST00000584063 DIAPH1O60610 1272 aaKnown RBP14.51□□□□□ -0.09
CDK5RAP3-231ENST00000584063 ITPRIPQ8IWB1 547 aa14.51□□□□□ -0.09
CDK5RAP3-231ENST00000584063 MYH16Q9H6N6 1097 aa14.51□□□□□ -0.09
CDK5RAP3-231ENST00000584063 ELL2O00472 640 aaPredicted RBP14.5□□□□□ -0.09
CDK5RAP3-231ENST00000584063 POLKQ9UBT6 870 aa14.5□□□□□ -0.09
CDK5RAP3-231ENST00000584063 BECN1Q14457 450 aa14.5□□□□□ -0.09
CDK5RAP3-231ENST00000584063 PHACTR3Q96KR7 559 aa14.5□□□□□ -0.09
CDK5RAP3-231ENST00000584063 NOB1Q9ULX3 412 aaKnown RBP14.5□□□□□ -0.09
CDK5RAP3-231ENST00000584063 COL3A1P02461 1466 aaPredicted RBP14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms