RNA–Protein interactions for RNA: ENST00000583962.1

CCDC144NL-AS1-218, CCDC144NL antisense RNA 1, humanhuman

TSL 1 (best)

Gene CCDC144NL-AS1, Length 3,352 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144NL-AS1-218ENST00000583962 NBPF11Q86T75 865 aa13.56□□□□□ -0.24
CCDC144NL-AS1-218ENST00000583962 PRPF38AQ8NAV1 312 aaKnown RBP13.56□□□□□ -0.24
CCDC144NL-AS1-218ENST00000583962 PUS7Q96PZ0 661 aaKnown RBP13.56□□□□□ -0.24
CCDC144NL-AS1-218ENST00000583962 DEF6Q9H4E7 631 aa13.56□□□□□ -0.24
CCDC144NL-AS1-218ENST00000583962 ZKSCAN5Q9Y2L8 839 aa13.56□□□□□ -0.24
CCDC144NL-AS1-218ENST00000583962 TCOF1Q13428 1488 aaKnown RBP13.56□□□□□ -0.24
CCDC144NL-AS1-218ENST00000583962 SLFN14P0C7P3 912 aa13.55□□□□□ -0.24
CCDC144NL-AS1-218ENST00000583962 SHANK2Q9UPX8 1470 aa13.55□□□□□ -0.24
CCDC144NL-AS1-218ENST00000583962 MFAP1P55081 439 aaKnown RBP13.55□□□□□ -0.24
CCDC144NL-AS1-218ENST00000583962 DUOX2Q9NRD8 1548 aa13.55□□□□□ -0.24
CCDC144NL-AS1-218ENST00000583962 MAST1Q9Y2H9 1570 aa13.55□□□□□ -0.24
CCDC144NL-AS1-218ENST00000583962 TNRQ92752 1358 aa13.55□□□□□ -0.24
CCDC144NL-AS1-218ENST00000583962 RAD51AP2Q09MP3 1159 aa13.54□□□□□ -0.24
CCDC144NL-AS1-218ENST00000583962 PPP1R9BQ96SB3 815 aa13.54□□□□□ -0.24
CCDC144NL-AS1-218ENST00000583962 HNRNPH2P55795 449 aaKnown RBP13.54□□□□□ -0.24
CCDC144NL-AS1-218ENST00000583962 C3P01024 1663 aa13.54□□□□□ -0.24
CCDC144NL-AS1-218ENST00000583962 PTPRKQ15262 1439 aa13.54□□□□□ -0.24
CCDC144NL-AS1-218ENST00000583962 SEC24BO95487 1268 aa13.54□□□□□ -0.24
CCDC144NL-AS1-218ENST00000583962 KIAA2012Q0VF49 1180 aa13.54□□□□□ -0.24
CCDC144NL-AS1-218ENST00000583962 CHAF1AQ13111 956 aaPredicted RBP13.54□□□□□ -0.24
CCDC144NL-AS1-218ENST00000583962 C20orf194Q5TEA3 1177 aa13.54□□□□□ -0.24
CCDC144NL-AS1-218ENST00000583962 TNPO1Q92973 898 aaKnown RBP13.54□□□□□ -0.24
CCDC144NL-AS1-218ENST00000583962 CLTCQ00610 1675 aaKnown RBP13.54□□□□□ -0.24
CCDC144NL-AS1-218ENST00000583962 PREX1Q8TCU6 1659 aa13.53□□□□□ -0.24
CCDC144NL-AS1-218ENST00000583962 NBPF9Q3BBW0 867 aa13.53□□□□□ -0.24
CCDC144NL-AS1-218ENST00000583962 CHMP5Q9NZZ3 219 aa13.53□□□□□ -0.24
CCDC144NL-AS1-218ENST00000583962 FAM135AQ9P2D6 1515 aa13.53□□□□□ -0.24
CCDC144NL-AS1-218ENST00000583962 KDM5DQ9BY66 1539 aa13.52□□□□□ -0.24
CCDC144NL-AS1-218ENST00000583962 POLD1P28340 1107 aa13.52□□□□□ -0.24
CCDC144NL-AS1-218ENST00000583962 CTR9Q6PD62 1173 aa13.52□□□□□ -0.24
CCDC144NL-AS1-218ENST00000583962 ANTXR1Q9H6X2 564 aa13.52□□□□□ -0.24
CCDC144NL-AS1-218ENST00000583962 TERF2Q15554 542 aa13.52□□□□□ -0.25
CCDC144NL-AS1-218ENST00000583962 FEZ1Q99689 392 aa13.52□□□□□ -0.25
CCDC144NL-AS1-218ENST00000583962 STAG3Q9UJ98 1225 aa13.52□□□□□ -0.25
CCDC144NL-AS1-218ENST00000583962 IPO8O15397 1037 aaKnown RBP13.52□□□□□ -0.25
CCDC144NL-AS1-218ENST00000583962 CALRP27797 417 aaKnown RBP13.52□□□□□ -0.25
CCDC144NL-AS1-218ENST00000583962 THEMISQ8N1K5 641 aaPredicted RBP13.52□□□□□ -0.25
CCDC144NL-AS1-218ENST00000583962 GOLGA6L1Q8N7Z2 621 aa13.52□□□□□ -0.25
CCDC144NL-AS1-218ENST00000583962 NOP2P46087 812 aaKnown RBP13.51□□□□□ -0.25
CCDC144NL-AS1-218ENST00000583962 NBPF6Q5VWK0 638 aa13.51□□□□□ -0.25
CCDC144NL-AS1-218ENST00000583962 NBPF5PQ86XG9 351 aaPredicted RBP13.51□□□□□ -0.25
CCDC144NL-AS1-218ENST00000583962 NBPF4Q96M43 638 aa13.51□□□□□ -0.25
CCDC144NL-AS1-218ENST00000583962 CXorf56Q9H5V9 222 aa13.51□□□□□ -0.25
CCDC144NL-AS1-218ENST00000583962 ERBINQ96RT1 1412 aa13.51□□□□□ -0.25
CCDC144NL-AS1-218ENST00000583962 H0YHG0 523 aa13.51□□□□□ -0.25
CCDC144NL-AS1-218ENST00000583962 SARNPP82979 210 aaKnown RBP13.51□□□□□ -0.25
CCDC144NL-AS1-218ENST00000583962 CDCA7LQ96GN5 454 aa13.51□□□□□ -0.25
CCDC144NL-AS1-218ENST00000583962 RAI14Q9P0K7 980 aa13.51□□□□□ -0.25
CCDC144NL-AS1-218ENST00000583962 NCOA1Q15788 1441 aa13.51□□□□□ -0.25
CCDC144NL-AS1-218ENST00000583962 MROH2AA6NES4 1674 aa13.51□□□□□ -0.25
CCDC144NL-AS1-218ENST00000583962 RPAINQ86UA6 219 aa13.51□□□□□ -0.25
CCDC144NL-AS1-218ENST00000583962 DONSONQ9NYP3 566 aa13.51□□□□□ -0.25
CCDC144NL-AS1-218ENST00000583962 DNMT1P26358 1616 aaKnown RBP13.5□□□□□ -0.25
CCDC144NL-AS1-218ENST00000583962 GUCY2CP25092 1073 aa13.5□□□□□ -0.25
CCDC144NL-AS1-218ENST00000583962 PKD2Q13563 968 aa13.5□□□□□ -0.25
CCDC144NL-AS1-218ENST00000583962 TBC1D2Q9BYX2 928 aa13.5□□□□□ -0.25
CCDC144NL-AS1-218ENST00000583962 TRIM66O15016 1216 aa13.49□□□□□ -0.25
CCDC144NL-AS1-218ENST00000583962 CENPQQ7L2Z9 268 aaPredicted RBP13.49□□□□□ -0.25
CCDC144NL-AS1-218ENST00000583962 ILDR1Q86SU0 546 aaPredicted RBP13.49□□□□□ -0.25
CCDC144NL-AS1-218ENST00000583962 PRIMPOLQ96LW4 560 aa13.49□□□□□ -0.25
CCDC144NL-AS1-218ENST00000583962 RRBP1Q9P2E9 1410 aaKnown RBP13.49□□□□□ -0.25
CCDC144NL-AS1-218ENST00000583962 JRKLQ9Y4A0 524 aa13.49□□□□□ -0.25
CCDC144NL-AS1-218ENST00000583962 NCKAP5LQ9HCH0 1330 aa13.49□□□□□ -0.25
CCDC144NL-AS1-218ENST00000583962 PZPP20742 1482 aa13.49□□□□□ -0.25
CCDC144NL-AS1-218ENST00000583962 FOXD4L6Q3SYB3 417 aaPredicted RBP13.49□□□□□ -0.25
CCDC144NL-AS1-218ENST00000583962 FOXD4L3Q6VB84 417 aaPredicted RBP13.49□□□□□ -0.25
CCDC144NL-AS1-218ENST00000583962 ZNF692Q9BU19 519 aaPredicted RBP13.49□□□□□ -0.25
CCDC144NL-AS1-218ENST00000583962 RBM28Q9NW13 759 aaKnown RBP13.49□□□□□ -0.25
CCDC144NL-AS1-218ENST00000583962 DDX49Q9Y6V7 483 aaKnown RBP13.49□□□□□ -0.25
CCDC144NL-AS1-218ENST00000583962 ANKRD50Q9ULJ7 1429 aa13.48□□□□□ -0.25
CCDC144NL-AS1-218ENST00000583962 CASC1Q6TDU7 716 aa13.48□□□□□ -0.25
CCDC144NL-AS1-218ENST00000583962 OTUD6BQ8N6M0 293 aa13.48□□□□□ -0.25
CCDC144NL-AS1-218ENST00000583962 CROCC2H7BZ55 1655 aa13.48□□□□□ -0.25
CCDC144NL-AS1-218ENST00000583962 RBM5P52756 815 aaKnown RBP eCLIP13.48□□□□□ -0.25
CCDC144NL-AS1-218ENST00000583962 ANKLE2Q86XL3 938 aa13.48□□□□□ -0.25
CCDC144NL-AS1-218ENST00000583962 CCDC39Q9UFE4 941 aa13.48□□□□□ -0.25
CCDC144NL-AS1-218ENST00000583962 NUTM2GQ5VZR2 741 aa13.47□□□□□ -0.25
CCDC144NL-AS1-218ENST00000583962 MNS1Q8NEH6 495 aa13.46□□□□□ -0.25
CCDC144NL-AS1-218ENST00000583962 CERKQ8TCT0 537 aa13.46□□□□□ -0.25
CCDC144NL-AS1-218ENST00000583962 GBP4Q96PP9 640 aa13.46□□□□□ -0.25
CCDC144NL-AS1-218ENST00000583962 A2ML1A8K2U0 1454 aa13.46□□□□□ -0.26
CCDC144NL-AS1-218ENST00000583962 CASQ1P31415 396 aa13.46□□□□□ -0.26
CCDC144NL-AS1-218ENST00000583962 CCDC91Q7Z6B0 441 aa13.46□□□□□ -0.26
CCDC144NL-AS1-218ENST00000583962 C17orf53Q8N3J3 647 aaPredicted RBP13.46□□□□□ -0.26
CCDC144NL-AS1-218ENST00000583962 EIF2AK4Q9P2K8 1649 aaKnown RBP13.45□□□□□ -0.26
CCDC144NL-AS1-218ENST00000583962 FBXO41Q8TF61 875 aa13.45□□□□□ -0.26
CCDC144NL-AS1-218ENST00000583962 ABCC3O15438 1527 aa13.45□□□□□ -0.26
CCDC144NL-AS1-218ENST00000583962 USP19O94966 1318 aa13.45□□□□□ -0.26
CCDC144NL-AS1-218ENST00000583962 BRMS1Q9HCU9 246 aa13.45□□□□□ -0.26
CCDC144NL-AS1-218ENST00000583962 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.45□□□□□ -0.26
CCDC144NL-AS1-218ENST00000583962 KIF16BQ96L93 1317 aa13.45□□□□□ -0.26
CCDC144NL-AS1-218ENST00000583962 GOLGA6L22H0YM25 854 aa13.45□□□□□ -0.26
CCDC144NL-AS1-218ENST00000583962 HS1BP3Q53T59 392 aa13.45□□□□□ -0.26
CCDC144NL-AS1-218ENST00000583962 RNF214Q8ND24 703 aa13.45□□□□□ -0.26
CCDC144NL-AS1-218ENST00000583962 FOXD4L1Q9NU39 408 aa13.45□□□□□ -0.26
CCDC144NL-AS1-218ENST00000583962 IRAK4Q9NWZ3 460 aa13.45□□□□□ -0.26
CCDC144NL-AS1-218ENST00000583962 PTPRTO14522 1441 aa13.44□□□□□ -0.26
CCDC144NL-AS1-218ENST00000583962 ADGRL2O95490 1459 aa13.44□□□□□ -0.26
CCDC144NL-AS1-218ENST00000583962 CAMSAP1Q5T5Y3 1602 aa13.44□□□□□ -0.26
CCDC144NL-AS1-218ENST00000583962 CCDC7Q96M83 1385 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms