RNA–Protein interactions for RNA: ENST00000583800.1

SMCHD1-210, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 5

Gene SMCHD1, Length 865 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-210ENST00000583800 PRAM1Q96QH2 718 aa11.55□□□□□ -0.56
SMCHD1-210ENST00000583800 CRYBG1Q9Y4K1 1723 aa11.55□□□□□ -0.56
SMCHD1-210ENST00000583800 SBNO1A3KN83 1393 aa11.54□□□□□ -0.56
SMCHD1-210ENST00000583800 PSME1Q06323 249 aa11.54□□□□□ -0.56
SMCHD1-210ENST00000583800 LMOD2Q6P5Q4 547 aa11.54□□□□□ -0.56
SMCHD1-210ENST00000583800 ANKARQ7Z5J8 1434 aa11.53□□□□□ -0.56
SMCHD1-210ENST00000583800 PMFBP1Q8TBY8 1022 aa11.53□□□□□ -0.56
SMCHD1-210ENST00000583800 ARHGEF10O15013 1369 aa11.53□□□□□ -0.56
SMCHD1-210ENST00000583800 VPS72Q15906 364 aa11.52□□□□□ -0.57
SMCHD1-210ENST00000583800 DEFB132Q7Z7B7 95 aa11.52□□□□□ -0.57
SMCHD1-210ENST00000583800 SEPT12Q8IYM1 358 aa11.52□□□□□ -0.57
SMCHD1-210ENST00000583800 CCDC9Q9Y3X0 531 aaKnown RBP11.52□□□□□ -0.57
SMCHD1-210ENST00000583800 ARHGEF28Q8N1W1 1705 aaKnown RBP11.52□□□□□ -0.57
SMCHD1-210ENST00000583800 COL14A1Q05707 1796 aaKnown RBP11.51□□□□□ -0.57
SMCHD1-210ENST00000583800 TULP4Q9NRJ4 1543 aa11.51□□□□□ -0.57
SMCHD1-210ENST00000583800 OCEL1Q9H607 264 aa11.51□□□□□ -0.57
SMCHD1-210ENST00000583800 POGKQ9P215 609 aa11.51□□□□□ -0.57
SMCHD1-210ENST00000583800 ITSN1Q15811 1721 aa11.51□□□□□ -0.57
SMCHD1-210ENST00000583800 RAB3GAP2Q9H2M9 1393 aa11.51□□□□□ -0.57
SMCHD1-210ENST00000583800 HIRIP3Q9BW71 556 aaPredicted RBP11.5□□□□□ -0.57
SMCHD1-210ENST00000583800 TRAK1Q9UPV9 953 aa11.5□□□□□ -0.57
SMCHD1-210ENST00000583800 FAM83GA6ND36 823 aa11.49□□□□□ -0.57
SMCHD1-210ENST00000583800 PAXIP1Q6ZW49 1069 aaPredicted RBP11.49□□□□□ -0.57
SMCHD1-210ENST00000583800 TMEM121BQ9BXQ6 578 aaPredicted RBP11.49□□□□□ -0.57
SMCHD1-210ENST00000583800 MINK1Q8N4C8 1332 aaPredicted RBP11.49□□□□□ -0.57
SMCHD1-210ENST00000583800 PRR36Q9H6K5 1346 aa11.49□□□□□ -0.57
SMCHD1-210ENST00000583800 RGPD1P0DJD0 1748 aa11.49□□□□□ -0.57
SMCHD1-210ENST00000583800 A0A0G2JS52 829 aa11.48□□□□□ -0.57
SMCHD1-210ENST00000583800 MYT1Q01538 1121 aa11.48□□□□□ -0.57
SMCHD1-210ENST00000583800 SF3B2Q13435 895 aaKnown RBP11.48□□□□□ -0.57
SMCHD1-210ENST00000583800 KRT27Q7Z3Y8 459 aa11.48□□□□□ -0.57
SMCHD1-210ENST00000583800 ACIN1Q9UKV3 1341 aaKnown RBP11.48□□□□□ -0.57
SMCHD1-210ENST00000583800 LRP5O75197 1615 aa11.48□□□□□ -0.57
SMCHD1-210ENST00000583800 PHRF1Q9P1Y6 1649 aaKnown RBP11.48□□□□□ -0.57
SMCHD1-210ENST00000583800 TNS1Q9HBL0 1735 aaKnown RBP11.47□□□□□ -0.57
SMCHD1-210ENST00000583800 EIF3AQ14152 1382 aaKnown RBP11.47□□□□□ -0.57
SMCHD1-210ENST00000583800 GPRASP1Q5JY77 1395 aa11.47□□□□□ -0.57
SMCHD1-210ENST00000583800 ONECUT3O60422 494 aaPredicted RBP11.47□□□□□ -0.57
SMCHD1-210ENST00000583800 BTG4Q9NY30 223 aa11.47□□□□□ -0.57
SMCHD1-210ENST00000583800 THSD7AQ9UPZ6 1657 aa11.46□□□□□ -0.57
SMCHD1-210ENST00000583800 SNPHO15079 494 aa11.46□□□□□ -0.57
SMCHD1-210ENST00000583800 MMRN1Q13201 1228 aa11.46□□□□□ -0.57
SMCHD1-210ENST00000583800 FAM98CQ17RN3 349 aaKnown RBP11.46□□□□□ -0.57
SMCHD1-210ENST00000583800 SPNS2Q8IVW8 549 aa11.46□□□□□ -0.57
SMCHD1-210ENST00000583800 TOPAZ1Q8N9V7 1692 aa11.46□□□□□ -0.58
SMCHD1-210ENST00000583800 ATP7BP35670 1465 aa11.45□□□□□ -0.58
SMCHD1-210ENST00000583800 PYGBP11216 843 aa11.45□□□□□ -0.58
SMCHD1-210ENST00000583800 DCAF8Q5TAQ9 597 aa11.45□□□□□ -0.58
SMCHD1-210ENST00000583800 DCAF11Q8TEB1 546 aa11.45□□□□□ -0.58
SMCHD1-210ENST00000583800 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.45□□□□□ -0.58
SMCHD1-210ENST00000583800 WASLO00401 505 aaPredicted RBP11.44□□□□□ -0.58
SMCHD1-210ENST00000583800 FAM182BQ5T319 152 aa11.43□□□□□ -0.58
SMCHD1-210ENST00000583800 NGDNQ8NEJ9 315 aaKnown RBP11.43□□□□□ -0.58
SMCHD1-210ENST00000583800 CFAP44Q96MT7 982 aa11.43□□□□□ -0.58
SMCHD1-210ENST00000583800 SPATA31A5Q5VU36 1347 aa11.42□□□□□ -0.58
SMCHD1-210ENST00000583800 SPATA31A7Q8IWB4 1347 aa11.42□□□□□ -0.58
SMCHD1-210ENST00000583800 PSDA5PKW4 1024 aaPredicted RBP11.42□□□□□ -0.58
SMCHD1-210ENST00000583800 BAG6P46379 1132 aa11.42□□□□□ -0.58
SMCHD1-210ENST00000583800 PCDHB8Q9UN66 801 aa11.42□□□□□ -0.58
SMCHD1-210ENST00000583800 KIAA1210Q9ULL0 1709 aa11.41□□□□□ -0.58
SMCHD1-210ENST00000583800 KLHL34Q8N239 644 aa11.41□□□□□ -0.58
SMCHD1-210ENST00000583800 MARVELD3Q96A59 401 aa11.41□□□□□ -0.58
SMCHD1-210ENST00000583800 PRDM11Q9NQV5 511 aa11.41□□□□□ -0.58
SMCHD1-210ENST00000583800 NRKQ7Z2Y5 1582 aa11.41□□□□□ -0.58
SMCHD1-210ENST00000583800 KIAA0232Q92628 1395 aa11.41□□□□□ -0.58
SMCHD1-210ENST00000583800 EN1Q05925 392 aaPredicted RBP11.4□□□□□ -0.58
SMCHD1-210ENST00000583800 TIMELESSQ9UNS1 1208 aa11.4□□□□□ -0.58
SMCHD1-210ENST00000583800 CHRNA2Q15822 529 aa11.39□□□□□ -0.59
SMCHD1-210ENST00000583800 NUDT16Q96DE0 195 aaKnown RBP11.39□□□□□ -0.59
SMCHD1-210ENST00000583800 DISP2A7MBM2 1401 aa11.38□□□□□ -0.59
SMCHD1-210ENST00000583800 HRCP23327 699 aa11.38□□□□□ -0.59
SMCHD1-210ENST00000583800 NUTM2GQ5VZR2 741 aa11.38□□□□□ -0.59
SMCHD1-210ENST00000583800 STRN4Q9NRL3 753 aa11.38□□□□□ -0.59
SMCHD1-210ENST00000583800 LMO7Q8WWI1 1683 aa11.38□□□□□ -0.59
SMCHD1-210ENST00000583800 SPATA31A1Q5TZJ5 1347 aa11.37□□□□□ -0.59
SMCHD1-210ENST00000583800 RREB1Q92766 1687 aa11.37□□□□□ -0.59
SMCHD1-210ENST00000583800 ZC3H6P61129 1189 aaKnown RBP11.37□□□□□ -0.59
SMCHD1-210ENST00000583800 STAC3Q96MF2 364 aa11.37□□□□□ -0.59
SMCHD1-210ENST00000583800 CDK19Q9BWU1 502 aa11.37□□□□□ -0.59
SMCHD1-210ENST00000583800 TSHZ2Q9NRE2 1034 aa11.37□□□□□ -0.59
SMCHD1-210ENST00000583800 POLR3AO14802 1390 aaPredicted RBP11.37□□□□□ -0.59
SMCHD1-210ENST00000583800 NUP188Q5SRE5 1749 aa11.37□□□□□ -0.59
SMCHD1-210ENST00000583800 QRICH2Q9H0J4 1663 aa11.36□□□□□ -0.59
SMCHD1-210ENST00000583800 ECM2O94769 699 aaPredicted RBP11.36□□□□□ -0.59
SMCHD1-210ENST00000583800 CAMTA1Q9Y6Y1 1673 aa11.36□□□□□ -0.59
SMCHD1-210ENST00000583800 ACEP12821 1306 aa11.35□□□□□ -0.59
SMCHD1-210ENST00000583800 SSH2Q76I76 1423 aa11.35□□□□□ -0.59
SMCHD1-210ENST00000583800 R3HDM1Q15032 1099 aaKnown RBP11.35□□□□□ -0.59
SMCHD1-210ENST00000583800 EZH2Q15910 746 aaKnown RBP11.35□□□□□ -0.59
SMCHD1-210ENST00000583800 PDCD7Q8N8D1 485 aaKnown RBP11.35□□□□□ -0.59
SMCHD1-210ENST00000583800 SPRYD3Q8NCJ5 442 aa11.35□□□□□ -0.59
SMCHD1-210ENST00000583800 USP35Q9P2H5 1018 aa11.35□□□□□ -0.59
SMCHD1-210ENST00000583800 TULP1O00294 542 aaPredicted RBP11.34□□□□□ -0.59
SMCHD1-210ENST00000583800 TRIM37O94972 964 aa11.34□□□□□ -0.59
SMCHD1-210ENST00000583800 NBPF8Q3BBV2 869 aa11.34□□□□□ -0.59
SMCHD1-210ENST00000583800 PARP4Q9UKK3 1724 aaKnown RBP11.34□□□□□ -0.59
SMCHD1-210ENST00000583800 PPIP5K1Q6PFW1 1433 aa11.33□□□□□ -0.6
SMCHD1-210ENST00000583800 WNK3Q9BYP7 1800 aa11.32□□□□□ -0.6
SMCHD1-210ENST00000583800 PLEKHG3A1L390 1219 aa11.32□□□□□ -0.6
SMCHD1-210ENST00000583800 NBPF1Q3BBV0 1214 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms