RNA–Protein interactions for RNA: ENST00000583796.1

IFT20-213, Transcript of intraflagellar transport 20, humanhuman

Gene IFT20, Length 1,485 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-213ENST00000583796 RGPD1P0DJD0 1748 aa13.35□□□□□ -0.27
IFT20-213ENST00000583796 PHRF1Q9P1Y6 1649 aaKnown RBP13.35□□□□□ -0.27
IFT20-213ENST00000583796 SENP3-EIF4A1A0A087X0R7 540 aa13.35□□□□□ -0.27
IFT20-213ENST00000583796 KDM4FA0A1W2PPD8 638 aa13.35□□□□□ -0.27
IFT20-213ENST00000583796 RSPH6AQ9H0K4 717 aa13.35□□□□□ -0.27
IFT20-213ENST00000583796 MYH16Q9H6N6 1097 aa13.35□□□□□ -0.27
IFT20-213ENST00000583796 ZRANB1Q9UGI0 708 aa13.35□□□□□ -0.27
IFT20-213ENST00000583796 PEAK1Q9H792 1746 aa13.34□□□□□ -0.27
IFT20-213ENST00000583796 PPM1GO15355 546 aaPredicted RBP13.34□□□□□ -0.27
IFT20-213ENST00000583796 CT47B1P0C2W7 299 aaPredicted RBP13.34□□□□□ -0.27
IFT20-213ENST00000583796 TMPOP42166 694 aaKnown RBP13.34□□□□□ -0.27
IFT20-213ENST00000583796 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.34□□□□□ -0.27
IFT20-213ENST00000583796 STRCP1A6NGW2 1772 aa13.34□□□□□ -0.27
IFT20-213ENST00000583796 STRCQ7RTU9 1775 aa13.33□□□□□ -0.28
IFT20-213ENST00000583796 C1orf167Q5SNV9 1468 aa13.33□□□□□ -0.28
IFT20-213ENST00000583796 ARHGEF10O15013 1369 aa13.33□□□□□ -0.28
IFT20-213ENST00000583796 ATXN8OSP0DMR3 200 aa13.33□□□□□ -0.28
IFT20-213ENST00000583796 TMEM94Q12767 1356 aa13.32□□□□□ -0.28
IFT20-213ENST00000583796 CALD1Q05682 793 aaKnown RBP13.32□□□□□ -0.28
IFT20-213ENST00000583796 RRS1Q15050 365 aaKnown RBP13.32□□□□□ -0.28
IFT20-213ENST00000583796 ESCO1Q5FWF5 840 aa13.32□□□□□ -0.28
IFT20-213ENST00000583796 ZBTB12Q9Y330 459 aaPredicted RBP13.32□□□□□ -0.28
IFT20-213ENST00000583796 PRKAR2BP31323 418 aa13.31□□□□□ -0.28
IFT20-213ENST00000583796 NLRP6P59044 892 aa13.31□□□□□ -0.28
IFT20-213ENST00000583796 LMOD3Q0VAK6 560 aa13.31□□□□□ -0.28
IFT20-213ENST00000583796 MAP3K19Q56UN5 1328 aa13.31□□□□□ -0.28
IFT20-213ENST00000583796 TRPM3Q9HCF6 1732 aaPredicted RBP13.31□□□□□ -0.28
IFT20-213ENST00000583796 CADPS2Q86UW7 1296 aa13.3□□□□□ -0.28
IFT20-213ENST00000583796 ABTB2Q8N961 1025 aa13.3□□□□□ -0.28
IFT20-213ENST00000583796 KCNH5Q8NCM2 988 aa13.3□□□□□ -0.28
IFT20-213ENST00000583796 SLIT3O75094 1523 aa13.3□□□□□ -0.28
IFT20-213ENST00000583796 NFAT5O94916 1531 aa13.3□□□□□ -0.28
IFT20-213ENST00000583796 MSH6P52701 1360 aa13.3□□□□□ -0.28
IFT20-213ENST00000583796 ATF3P18847 181 aa13.29□□□□□ -0.28
IFT20-213ENST00000583796 PSME1Q06323 249 aa13.29□□□□□ -0.28
IFT20-213ENST00000583796 EIF4A2Q14240 407 aaKnown RBP13.29□□□□□ -0.28
IFT20-213ENST00000583796 NFE2L2Q16236 605 aa13.29□□□□□ -0.28
IFT20-213ENST00000583796 KDRP35968 1356 aa13.29□□□□□ -0.28
IFT20-213ENST00000583796 FBLN1P23142 703 aa13.29□□□□□ -0.28
IFT20-213ENST00000583796 IRX6P78412 446 aaPredicted RBP13.29□□□□□ -0.28
IFT20-213ENST00000583796 NEUROD2Q15784 382 aa13.29□□□□□ -0.28
IFT20-213ENST00000583796 RRP7AQ9Y3A4 280 aaKnown RBP13.29□□□□□ -0.28
IFT20-213ENST00000583796 RIPK4P57078 832 aa13.28□□□□□ -0.28
IFT20-213ENST00000583796 TRIM35Q9UPQ4 493 aa13.28□□□□□ -0.28
IFT20-213ENST00000583796 LTN1O94822 1766 aa13.27□□□□□ -0.29
IFT20-213ENST00000583796 AMPHP49418 695 aa13.27□□□□□ -0.29
IFT20-213ENST00000583796 HSPA2P54652 639 aa13.27□□□□□ -0.29
IFT20-213ENST00000583796 ALS2Q96Q42 1657 aa13.26□□□□□ -0.29
IFT20-213ENST00000583796 PAK3O75914 559 aaPredicted RBP13.26□□□□□ -0.29
IFT20-213ENST00000583796 USP19O94966 1318 aa13.26□□□□□ -0.29
IFT20-213ENST00000583796 IGSF1Q8N6C5 1336 aa13.26□□□□□ -0.29
IFT20-213ENST00000583796 XIRP1Q702N8 1843 aaKnown RBP13.26□□□□□ -0.29
IFT20-213ENST00000583796 HSP90AB2PQ58FF8 381 aa13.25□□□□□ -0.29
IFT20-213ENST00000583796 ZNF428Q96B54 188 aa13.25□□□□□ -0.29
IFT20-213ENST00000583796 RBM33Q96EV2 1170 aaKnown RBP13.25□□□□□ -0.29
IFT20-213ENST00000583796 ABCC6O95255 1503 aa13.25□□□□□ -0.29
IFT20-213ENST00000583796 HMOX1P09601 288 aa13.24□□□□□ -0.29
IFT20-213ENST00000583796 HOXC9P31274 260 aa13.24□□□□□ -0.29
IFT20-213ENST00000583796 ORAI2Q96SN7 254 aa13.24□□□□□ -0.29
IFT20-213ENST00000583796 NPHP3Q7Z494 1330 aa13.24□□□□□ -0.29
IFT20-213ENST00000583796 FANCIQ9NVI1 1328 aa13.24□□□□□ -0.29
IFT20-213ENST00000583796 DLG5Q8TDM6 1919 aa13.24□□□□□ -0.29
IFT20-213ENST00000583796 FOXO3O43524 673 aa13.23□□□□□ -0.29
IFT20-213ENST00000583796 PDE3AQ14432 1141 aa13.23□□□□□ -0.29
IFT20-213ENST00000583796 SULT6B1Q6IMI4 303 aa13.23□□□□□ -0.29
IFT20-213ENST00000583796 PHACTR3Q96KR7 559 aa13.23□□□□□ -0.29
IFT20-213ENST00000583796 IFT57Q9NWB7 429 aa13.23□□□□□ -0.29
IFT20-213ENST00000583796 MED1Q15648 1581 aaPredicted RBP13.22□□□□□ -0.29
IFT20-213ENST00000583796 GNAI1P63096 354 aa13.22□□□□□ -0.29
IFT20-213ENST00000583796 AAMPQ13685 434 aa13.22□□□□□ -0.29
IFT20-213ENST00000583796 POTEHQ6S545 545 aa13.22□□□□□ -0.29
IFT20-213ENST00000583796 IP6K1Q92551 441 aa13.22□□□□□ -0.29
IFT20-213ENST00000583796 CCDC136Q96JN2 1154 aa13.22□□□□□ -0.29
IFT20-213ENST00000583796 RARSP54136 660 aaKnown RBP13.21□□□□□ -0.3
IFT20-213ENST00000583796 KRT28Q7Z3Y7 464 aa13.21□□□□□ -0.3
IFT20-213ENST00000583796 TNS3Q68CZ2 1445 aa13.2□□□□□ -0.3
IFT20-213ENST00000583796 PLEKHG2Q9H7P9 1386 aa13.2□□□□□ -0.3
IFT20-213ENST00000583796 SOX12O15370 315 aa13.2□□□□□ -0.3
IFT20-213ENST00000583796 MS4A1P11836 297 aa13.2□□□□□ -0.3
IFT20-213ENST00000583796 HAP1P54257 671 aaPredicted RBP13.2□□□□□ -0.3
IFT20-213ENST00000583796 GAS2L2Q8NHY3 880 aa13.2□□□□□ -0.3
IFT20-213ENST00000583796 PXDNQ92626 1479 aa13.2□□□□□ -0.3
IFT20-213ENST00000583796 NCAPD2Q15021 1401 aa13.19□□□□□ -0.3
IFT20-213ENST00000583796 CAMTA1Q9Y6Y1 1673 aa13.19□□□□□ -0.3
IFT20-213ENST00000583796 HTATSF1O43719 755 aaKnown RBP13.19□□□□□ -0.3
IFT20-213ENST00000583796 ZNF853P0CG23 659 aa13.19□□□□□ -0.3
IFT20-213ENST00000583796 CFAP44Q96MT7 982 aa13.19□□□□□ -0.3
IFT20-213ENST00000583796 EYA1Q99502 592 aa13.19□□□□□ -0.3
IFT20-213ENST00000583796 GCP02774 474 aa13.18□□□□□ -0.3
IFT20-213ENST00000583796 AEBP1Q8IUX7 1158 aa13.18□□□□□ -0.3
IFT20-213ENST00000583796 EXOC6Q8TAG9 804 aa13.18□□□□□ -0.3
IFT20-213ENST00000583796 BRPF1P55201 1214 aaPredicted RBP13.17□□□□□ -0.3
IFT20-213ENST00000583796 ALDH1L2Q3SY69 923 aa13.17□□□□□ -0.3
IFT20-213ENST00000583796 NUTM2GQ5VZR2 741 aa13.17□□□□□ -0.3
IFT20-213ENST00000583796 B4GALNT3Q6L9W6 998 aa13.17□□□□□ -0.3
IFT20-213ENST00000583796 ARHGEF25Q86VW2 580 aa13.17□□□□□ -0.3
IFT20-213ENST00000583796 CRYBG1Q9Y4K1 1723 aa13.17□□□□□ -0.3
IFT20-213ENST00000583796 FAM208AQ9UK61 1670 aaKnown RBP13.17□□□□□ -0.3
IFT20-213ENST00000583796 PLIN1O60240 522 aa13.16□□□□□ -0.3
IFT20-213ENST00000583796 LRRC37A3O60309 1634 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms