RNA–Protein interactions for RNA: ENST00000583382.1

CDH8-209, Transcript of cadherin 8, humanhuman

TSL 5

Gene CDH8, Length 1,528 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-209ENST00000583382 SLC10A3P09131 477 aa7.58□□□□□ -1.2
CDH8-209ENST00000583382 MS4A1P11836 297 aa7.58□□□□□ -1.2
CDH8-209ENST00000583382 SSTR3P32745 418 aaPredicted RBP7.58□□□□□ -1.2
CDH8-209ENST00000583382 HPS5Q9UPZ3 1129 aa7.58□□□□□ -1.2
CDH8-209ENST00000583382 CDC42BPAQ5VT25 1732 aa7.58□□□□□ -1.2
CDH8-209ENST00000583382 FBXO31Q5XUX0 539 aaPredicted RBP7.57□□□□□ -1.2
CDH8-209ENST00000583382 ZNF772Q68DY9 489 aaPredicted RBP7.57□□□□□ -1.2
CDH8-209ENST00000583382 KDM4CQ9H3R0 1056 aa7.57□□□□□ -1.2
CDH8-209ENST00000583382 XIRP1Q702N8 1843 aaKnown RBP7.57□□□□□ -1.2
CDH8-209ENST00000583382 INO80Q9ULG1 1556 aaPredicted RBP7.57□□□□□ -1.2
CDH8-209ENST00000583382 LRRC9Q6ZRR7 1453 aa7.57□□□□□ -1.2
CDH8-209ENST00000583382 SLC4A3P48751 1232 aa7.57□□□□□ -1.2
CDH8-209ENST00000583382 SULF1Q8IWU6 871 aa7.57□□□□□ -1.2
CDH8-209ENST00000583382 RDH13Q8NBN7 331 aa7.57□□□□□ -1.2
CDH8-209ENST00000583382 WBP1LQ9NX94 342 aa7.57□□□□□ -1.2
CDH8-209ENST00000583382 TSR3Q9UJK0 312 aaKnown RBP7.57□□□□□ -1.2
CDH8-209ENST00000583382 KDM5DQ9BY66 1539 aa7.56□□□□□ -1.2
CDH8-209ENST00000583382 ROBO1Q9Y6N7 1651 aa7.56□□□□□ -1.2
CDH8-209ENST00000583382 PZPP20742 1482 aa7.56□□□□□ -1.2
CDH8-209ENST00000583382 PLEKHH2Q8IVE3 1493 aa7.56□□□□□ -1.2
CDH8-209ENST00000583382 CD46P15529 392 aa7.56□□□□□ -1.2
CDH8-209ENST00000583382 PTPN5P54829 565 aa7.56□□□□□ -1.2
CDH8-209ENST00000583382 PPP4CP60510 307 aa7.56□□□□□ -1.2
CDH8-209ENST00000583382 PHLPP1O60346 1717 aa7.55□□□□□ -1.2
CDH8-209ENST00000583382 SYCP2Q9BX26 1530 aa7.55□□□□□ -1.2
CDH8-209ENST00000583382 ZC3H13Q5T200 1668 aaKnown RBP7.55□□□□□ -1.2
CDH8-209ENST00000583382 CDK12Q9NYV4 1490 aaPredicted RBP7.55□□□□□ -1.2
CDH8-209ENST00000583382 JCADQ9P266 1359 aa7.54□□□□□ -1.2
CDH8-209ENST00000583382 RXRBP28702 533 aa7.54□□□□□ -1.2
CDH8-209ENST00000583382 MIA2Q96PC5 1412 aa7.54□□□□□ -1.2
CDH8-209ENST00000583382 CFHP08603 1231 aa7.53□□□□□ -1.2
CDH8-209ENST00000583382 EEA1Q15075 1411 aa7.53□□□□□ -1.2
CDH8-209ENST00000583382 RSPH4AQ5TD94 716 aa7.53□□□□□ -1.2
CDH8-209ENST00000583382 MEX3CQ5U5Q3 659 aaKnown RBP7.53□□□□□ -1.2
CDH8-209ENST00000583382 LRRIQ1Q96JM4 1722 aa7.53□□□□□ -1.2
CDH8-209ENST00000583382 PLSCR2Q9NRY7 297 aa7.53□□□□□ -1.2
CDH8-209ENST00000583382 ZNF777Q9ULD5 760 aaPredicted RBP7.53□□□□□ -1.2
CDH8-209ENST00000583382 KIAA1107Q9UPP5 1409 aa7.53□□□□□ -1.2
CDH8-209ENST00000583382 GCGRP47871 477 aa7.52□□□□□ -1.2
CDH8-209ENST00000583382 APLP1P51693 650 aa7.52□□□□□ -1.2
CDH8-209ENST00000583382 BEGAINQ9BUH8 593 aa7.52□□□□□ -1.2
CDH8-209ENST00000583382 FAM117AQ9C073 453 aa7.52□□□□□ -1.2
CDH8-209ENST00000583382 CCDC18Q5T9S5 1454 aa7.52□□□□□ -1.21
CDH8-209ENST00000583382 SPATA31A6Q5VVP1 1343 aa7.52□□□□□ -1.21
CDH8-209ENST00000583382 HNRNPMP52272 730 aaKnown RBP eCLIP7.52□□□□□ -1.21
CDH8-209ENST00000583382 NECTIN2Q92692 538 aa7.52□□□□□ -1.21
CDH8-209ENST00000583382 HCSTQ9UBK5 93 aa7.51□□□□□ -1.21
CDH8-209ENST00000583382 FGD6Q6ZV73 1430 aa7.5□□□□□ -1.21
CDH8-209ENST00000583382 SCAF11Q99590 1463 aaKnown RBP7.5□□□□□ -1.21
CDH8-209ENST00000583382 WASHC2CQ9Y4E1 1318 aa7.5□□□□□ -1.21
CDH8-209ENST00000583382 PLEKHG3A1L390 1219 aa7.49□□□□□ -1.21
CDH8-209ENST00000583382 KMT5BQ4FZB7 885 aa7.49□□□□□ -1.21
CDH8-209ENST00000583382 DHX29Q7Z478 1369 aaKnown RBP7.49□□□□□ -1.21
CDH8-209ENST00000583382 RTEL1-TNFRSF6BF6WH68 1400 aa7.49□□□□□ -1.21
CDH8-209ENST00000583382 SHPRHQ149N8 1683 aa7.48□□□□□ -1.21
CDH8-209ENST00000583382 UBR1Q8IWV7 1749 aa7.48□□□□□ -1.21
CDH8-209ENST00000583382 NUTM2BA6NNL0 878 aaPredicted RBP7.48□□□□□ -1.21
CDH8-209ENST00000583382 NUTM2EB1AL46 878 aaPredicted RBP7.48□□□□□ -1.21
CDH8-209ENST00000583382 ACTN4O43707 911 aaKnown RBP7.48□□□□□ -1.21
CDH8-209ENST00000583382 FUT2Q10981 343 aa7.48□□□□□ -1.21
CDH8-209ENST00000583382 NUTM2DQ5VT03 806 aaPredicted RBP7.48□□□□□ -1.21
CDH8-209ENST00000583382 NYAP1Q6ZVC0 841 aa7.48□□□□□ -1.21
CDH8-209ENST00000583382 NUTM2AQ8IVF1 878 aaPredicted RBP7.48□□□□□ -1.21
CDH8-209ENST00000583382 IL27Q8NEV9 243 aa7.48□□□□□ -1.21
CDH8-209ENST00000583382 KIF3BO15066 747 aa7.47□□□□□ -1.21
CDH8-209ENST00000583382 KDM4AO75164 1064 aa7.47□□□□□ -1.21
CDH8-209ENST00000583382 SPIRE2Q8WWL2 714 aa7.47□□□□□ -1.21
CDH8-209ENST00000583382 DDRGK1Q96HY6 314 aa7.47□□□□□ -1.21
CDH8-209ENST00000583382 EID1Q9Y6B2 187 aa7.47□□□□□ -1.21
CDH8-209ENST00000583382 MSH6P52701 1360 aa7.47□□□□□ -1.21
CDH8-209ENST00000583382 TMEM94Q12767 1356 aa7.47□□□□□ -1.21
CDH8-209ENST00000583382 NUTM1Q86Y26 1132 aa7.47□□□□□ -1.21
CDH8-209ENST00000583382 PRR14Q9BWN1 585 aa7.47□□□□□ -1.21
CDH8-209ENST00000583382 TBC1D2Q9BYX2 928 aa7.47□□□□□ -1.21
CDH8-209ENST00000583382 CFDP1Q9UEE9 299 aaPredicted RBP7.47□□□□□ -1.21
CDH8-209ENST00000583382 ABCC3O15438 1527 aa7.47□□□□□ -1.21
CDH8-209ENST00000583382 GPATCH8Q9UKJ3 1502 aaKnown RBP7.47□□□□□ -1.21
CDH8-209ENST00000583382 LRP6O75581 1613 aa7.47□□□□□ -1.21
CDH8-209ENST00000583382 COL16A1Q07092 1604 aaPredicted RBP7.47□□□□□ -1.21
CDH8-209ENST00000583382 CFAP65Q6ZU64 1925 aaKnown RBP7.46□□□□□ -1.22
CDH8-209ENST00000583382 SETBP1Q9Y6X0 1596 aa7.46□□□□□ -1.22
CDH8-209ENST00000583382 SLIT1O75093 1534 aa7.46□□□□□ -1.22
CDH8-209ENST00000583382 ARHGAP35Q9NRY4 1499 aa7.46□□□□□ -1.22
CDH8-209ENST00000583382 PUS10Q3MIT2 529 aaKnown RBP7.46□□□□□ -1.22
CDH8-209ENST00000583382 TXNDC2Q86VQ3 553 aa7.46□□□□□ -1.22
CDH8-209ENST00000583382 PROSER2Q86WR7 435 aaPredicted RBP7.46□□□□□ -1.22
CDH8-209ENST00000583382 PCDHB3Q9Y5E6 796 aa7.46□□□□□ -1.22
CDH8-209ENST00000583382 TIAM1Q13009 1591 aa7.45□□□□□ -1.22
CDH8-209ENST00000583382 NKTRP30414 1462 aaKnown RBP7.45□□□□□ -1.22
CDH8-209ENST00000583382 LTKP29376 864 aa7.45□□□□□ -1.22
CDH8-209ENST00000583382 HLA-CQ95604 372 aa7.45□□□□□ -1.22
CDH8-209ENST00000583382 SLAIN2Q9P270 581 aa7.45□□□□□ -1.22
CDH8-209ENST00000583382 MAP3K1Q13233 1512 aa7.44□□□□□ -1.22
CDH8-209ENST00000583382 ARHGAP23Q9P227 1491 aa7.44□□□□□ -1.22
CDH8-209ENST00000583382 ATAD2Q6PL18 1390 aa7.44□□□□□ -1.22
CDH8-209ENST00000583382 CCNB3Q8WWL7 1395 aa7.44□□□□□ -1.22
CDH8-209ENST00000583382 HOXA2O43364 376 aa7.44□□□□□ -1.22
CDH8-209ENST00000583382 KCNA6P17658 529 aa7.44□□□□□ -1.22
CDH8-209ENST00000583382 ATP6V1AP38606 617 aa7.44□□□□□ -1.22
CDH8-209ENST00000583382 USP46P62068 366 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms