RNA–Protein interactions for RNA: ENST00000582539.5

TRAPPC8-211, Transcript of trafficking protein particle complex 8, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC8, Length 4,391 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC8-211ENST00000582539 C19orf44Q9H6X5 657 aa12.77□□□□□ -0.37
TRAPPC8-211ENST00000582539 DCCP43146 1447 aa12.77□□□□□ -0.37
TRAPPC8-211ENST00000582539 ANP32EQ9BTT0 268 aa12.76□□□□□ -0.37
TRAPPC8-211ENST00000582539 ZNF142P52746 1687 aaPredicted RBP12.76□□□□□ -0.37
TRAPPC8-211ENST00000582539 POLKQ9UBT6 870 aa12.75□□□□□ -0.37
TRAPPC8-211ENST00000582539 MYO5BQ9ULV0 1848 aa12.75□□□□□ -0.37
TRAPPC8-211ENST00000582539 NPHP3Q7Z494 1330 aa12.75□□□□□ -0.37
TRAPPC8-211ENST00000582539 RIMS1Q86UR5 1692 aaKnown RBP12.75□□□□□ -0.37
TRAPPC8-211ENST00000582539 CRBNQ96SW2 442 aa12.75□□□□□ -0.37
TRAPPC8-211ENST00000582539 ROBO2Q9HCK4 1378 aa12.74□□□□□ -0.37
TRAPPC8-211ENST00000582539 BRPF1P55201 1214 aaPredicted RBP12.74□□□□□ -0.37
TRAPPC8-211ENST00000582539 LAS1LQ9Y4W2 734 aaKnown RBP12.74□□□□□ -0.37
TRAPPC8-211ENST00000582539 PTPRCP08575 1304 aa12.74□□□□□ -0.37
TRAPPC8-211ENST00000582539 CEBPAP49715 358 aaPredicted RBP12.74□□□□□ -0.37
TRAPPC8-211ENST00000582539 LTKP29376 864 aa12.74□□□□□ -0.37
TRAPPC8-211ENST00000582539 CCDC30Q5VVM6 783 aa12.73□□□□□ -0.37
TRAPPC8-211ENST00000582539 NME9Q86XW9 330 aa12.73□□□□□ -0.37
TRAPPC8-211ENST00000582539 GCC1Q96CN9 775 aa12.73□□□□□ -0.37
TRAPPC8-211ENST00000582539 KIAA0232Q92628 1395 aa12.73□□□□□ -0.37
TRAPPC8-211ENST00000582539 EXOC6Q8TAG9 804 aa12.73□□□□□ -0.37
TRAPPC8-211ENST00000582539 RARSP54136 660 aaKnown RBP12.72□□□□□ -0.37
TRAPPC8-211ENST00000582539 FAM161AQ3B820 660 aa12.72□□□□□ -0.37
TRAPPC8-211ENST00000582539 ESCO1Q5FWF5 840 aa12.72□□□□□ -0.37
TRAPPC8-211ENST00000582539 ITPRIPQ8IWB1 547 aa12.72□□□□□ -0.37
TRAPPC8-211ENST00000582539 ATF7IPQ6VMQ6 1270 aa12.72□□□□□ -0.37
TRAPPC8-211ENST00000582539 CCT4P50991 539 aaKnown RBP12.72□□□□□ -0.37
TRAPPC8-211ENST00000582539 TEFQ10587 303 aa12.71□□□□□ -0.37
TRAPPC8-211ENST00000582539 MVPQ14764 893 aaKnown RBP12.71□□□□□ -0.37
TRAPPC8-211ENST00000582539 HOXB7P09629 217 aa12.71□□□□□ -0.37
TRAPPC8-211ENST00000582539 HSP90AB4PQ58FF6 505 aa12.71□□□□□ -0.37
TRAPPC8-211ENST00000582539 PHF23Q9BUL5 403 aaPredicted RBP12.71□□□□□ -0.37
TRAPPC8-211ENST00000582539 RSPH6AQ9H0K4 717 aa12.71□□□□□ -0.38
TRAPPC8-211ENST00000582539 SPG7Q9UQ90 795 aa12.71□□□□□ -0.38
TRAPPC8-211ENST00000582539 DDX58O95786 925 aaKnown RBP12.7□□□□□ -0.38
TRAPPC8-211ENST00000582539 IL13P35225 146 aa12.7□□□□□ -0.38
TRAPPC8-211ENST00000582539 RAPGEF4Q8WZA2 1011 aa12.7□□□□□ -0.38
TRAPPC8-211ENST00000582539 CDCA7LQ96GN5 454 aa12.7□□□□□ -0.38
TRAPPC8-211ENST00000582539 TSHZ2Q9NRE2 1034 aa12.7□□□□□ -0.38
TRAPPC8-211ENST00000582539 KIF1AQ12756 1690 aa12.7□□□□□ -0.38
TRAPPC8-211ENST00000582539 GNAI3P08754 354 aa12.7□□□□□ -0.38
TRAPPC8-211ENST00000582539 PTMSP20962 102 aa12.69□□□□□ -0.38
TRAPPC8-211ENST00000582539 GNAT3A8MTJ3 354 aa12.69□□□□□ -0.38
TRAPPC8-211ENST00000582539 SULT6B1Q6IMI4 303 aa12.69□□□□□ -0.38
TRAPPC8-211ENST00000582539 MON2Q7Z3U7 1717 aa12.69□□□□□ -0.38
TRAPPC8-211ENST00000582539 IQSEC2Q5JU85 1478 aa12.69□□□□□ -0.38
TRAPPC8-211ENST00000582539 TWISTNBQ3B726 338 aaPredicted RBP12.69□□□□□ -0.38
TRAPPC8-211ENST00000582539 NCAPD2Q15021 1401 aa12.69□□□□□ -0.38
TRAPPC8-211ENST00000582539 RRP7AQ9Y3A4 280 aaKnown RBP12.69□□□□□ -0.38
TRAPPC8-211ENST00000582539 EXOSC9Q06265 439 aaKnown RBP12.68□□□□□ -0.38
TRAPPC8-211ENST00000582539 NPM2Q86SE8 214 aaKnown RBP12.68□□□□□ -0.38
TRAPPC8-211ENST00000582539 LMOD2Q6P5Q4 547 aa12.68□□□□□ -0.38
TRAPPC8-211ENST00000582539 IP6K1Q92551 441 aa12.68□□□□□ -0.38
TRAPPC8-211ENST00000582539 TSPYL4Q9UJ04 414 aa12.68□□□□□ -0.38
TRAPPC8-211ENST00000582539 OVOS2A0A0J9YW53 1432 aa12.68□□□□□ -0.38
TRAPPC8-211ENST00000582539 OVOS2Q6IE36 1432 aa12.68□□□□□ -0.38
TRAPPC8-211ENST00000582539 TATP17735 454 aaPredicted RBP12.67□□□□□ -0.38
TRAPPC8-211ENST00000582539 RBM19Q9Y4C8 960 aaKnown RBP12.67□□□□□ -0.38
TRAPPC8-211ENST00000582539 CSB-PGBD3P0DP91 1061 aa12.67□□□□□ -0.38
TRAPPC8-211ENST00000582539 ADAMTSL3P82987 1691 aa12.67□□□□□ -0.38
TRAPPC8-211ENST00000582539 NRXN3Q9Y4C0 1643 aa12.67□□□□□ -0.38
TRAPPC8-211ENST00000582539 RPAP2Q8IXW5 612 aaPredicted RBP12.66□□□□□ -0.38
TRAPPC8-211ENST00000582539 SENP3Q9H4L4 574 aaPredicted RBP12.66□□□□□ -0.38
TRAPPC8-211ENST00000582539 AKAP12Q02952 1782 aa12.66□□□□□ -0.38
TRAPPC8-211ENST00000582539 SETD1AO15047 1707 aaKnown RBP12.66□□□□□ -0.38
TRAPPC8-211ENST00000582539 XRN1Q8IZH2 1706 aaKnown RBP12.66□□□□□ -0.38
TRAPPC8-211ENST00000582539 GPATCH3Q96I76 525 aa12.65□□□□□ -0.38
TRAPPC8-211ENST00000582539 EMILIN1Q9Y6C2 1016 aa12.65□□□□□ -0.39
TRAPPC8-211ENST00000582539 KRT28Q7Z3Y7 464 aa12.64□□□□□ -0.39
TRAPPC8-211ENST00000582539 PLEKHF1Q96S99 279 aa12.64□□□□□ -0.39
TRAPPC8-211ENST00000582539 HMOX1P09601 288 aa12.64□□□□□ -0.39
TRAPPC8-211ENST00000582539 HDAC1Q13547 482 aaPredicted RBP12.64□□□□□ -0.39
TRAPPC8-211ENST00000582539 EIF4A2Q14240 407 aaKnown RBP12.64□□□□□ -0.39
TRAPPC8-211ENST00000582539 MCCP23508 829 aa12.64□□□□□ -0.39
TRAPPC8-211ENST00000582539 TAF7Q15545 349 aaPredicted RBP12.64□□□□□ -0.39
TRAPPC8-211ENST00000582539 MAP3K5Q99683 1374 aa12.64□□□□□ -0.39
TRAPPC8-211ENST00000582539 CD163L1Q9NR16 1453 aa12.64□□□□□ -0.39
TRAPPC8-211ENST00000582539 COL3A1P02461 1466 aaPredicted RBP12.63□□□□□ -0.39
TRAPPC8-211ENST00000582539 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.63□□□□□ -0.399e-7■■■■□ 20
TRAPPC8-211ENST00000582539 ABCC6O95255 1503 aa12.63□□□□□ -0.39
TRAPPC8-211ENST00000582539 ZBTB7CA1YPR0 619 aa12.62□□□□□ -0.39
TRAPPC8-211ENST00000582539 OVOS2A0A0G2JMS6 1433 aa12.62□□□□□ -0.39
TRAPPC8-211ENST00000582539 IGSF1Q8N6C5 1336 aa12.62□□□□□ -0.39
TRAPPC8-211ENST00000582539 COG6Q9Y2V7 657 aa12.62□□□□□ -0.39
TRAPPC8-211ENST00000582539 TOPAZ1Q8N9V7 1692 aa12.61□□□□□ -0.39
TRAPPC8-211ENST00000582539 HSP90B1P14625 803 aaKnown RBP12.61□□□□□ -0.39
TRAPPC8-211ENST00000582539 PRR36Q9H6K5 1346 aa12.61□□□□□ -0.39
TRAPPC8-211ENST00000582539 PDE4AP27815 886 aa12.61□□□□□ -0.39
TRAPPC8-211ENST00000582539 AKAP4Q5JQC9 854 aa12.61□□□□□ -0.39
TRAPPC8-211ENST00000582539 NOP58Q9Y2X3 529 aaKnown RBP12.61□□□□□ -0.39
TRAPPC8-211ENST00000582539 FMN2Q9NZ56 1722 aa12.61□□□□□ -0.39
TRAPPC8-211ENST00000582539 MAP3K19Q56UN5 1328 aa12.61□□□□□ -0.39
TRAPPC8-211ENST00000582539 HOXC9P31274 260 aa12.6□□□□□ -0.39
TRAPPC8-211ENST00000582539 NEXNQ0ZGT2 675 aa12.6□□□□□ -0.39
TRAPPC8-211ENST00000582539 RRS1Q15050 365 aaKnown RBP12.6□□□□□ -0.39
TRAPPC8-211ENST00000582539 TTC5Q8N0Z6 440 aa12.6□□□□□ -0.39
TRAPPC8-211ENST00000582539 IPO9Q96P70 1041 aaKnown RBP12.6□□□□□ -0.39
TRAPPC8-211ENST00000582539 NWD1Q149M9 1564 aa12.6□□□□□ -0.39
TRAPPC8-211ENST00000582539 NUTM2FA1L443 756 aa12.6□□□□□ -0.39
TRAPPC8-211ENST00000582539 CHMP4CQ96CF2 233 aa12.6□□□□□ -0.39
TRAPPC8-211ENST00000582539 SRCIN1Q9C0H9 1055 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms