RNA–Protein interactions for RNA: ENST00000580014.1

RNF43-204, Transcript of ring finger protein 43, humanhuman

TSL 3

Gene RNF43, Length 497 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-204ENST00000580014 NWD1Q149M9 1564 aa10.07□□□□□ -0.8
RNF43-204ENST00000580014 USP47Q96K76 1375 aa10.07□□□□□ -0.8
RNF43-204ENST00000580014 SBNO2Q9Y2G9 1366 aa10.07□□□□□ -0.8
RNF43-204ENST00000580014 EIF4G2P78344 907 aaKnown RBP eCLIP10.07□□□□□ -0.8
RNF43-204ENST00000580014 AMOTL2Q9Y2J4 779 aa10.07□□□□□ -0.8
RNF43-204ENST00000580014 MINK1Q8N4C8 1332 aaPredicted RBP10.07□□□□□ -0.8
RNF43-204ENST00000580014 FCHSD2O94868 740 aa10.06□□□□□ -0.8
RNF43-204ENST00000580014 ANO8Q9HCE9 1232 aaPredicted RBP10.06□□□□□ -0.8
RNF43-204ENST00000580014 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.06□□□□□ -0.8
RNF43-204ENST00000580014 XRN1Q8IZH2 1706 aaKnown RBP10.06□□□□□ -0.8
RNF43-204ENST00000580014 CPS1P31327 1500 aa10.06□□□□□ -0.8
RNF43-204ENST00000580014 ROBO2Q9HCK4 1378 aa10.05□□□□□ -0.8
RNF43-204ENST00000580014 HSPA5P11021 654 aaKnown RBP10.05□□□□□ -0.8
RNF43-204ENST00000580014 PDE4DQ08499 809 aa10.05□□□□□ -0.8
RNF43-204ENST00000580014 MAP2K5Q13163 448 aa10.05□□□□□ -0.8
RNF43-204ENST00000580014 TESK2Q96S53 571 aa10.05□□□□□ -0.8
RNF43-204ENST00000580014 TRAK1Q9UPV9 953 aa10.05□□□□□ -0.8
RNF43-204ENST00000580014 NCOA3Q9Y6Q9 1424 aa10.05□□□□□ -0.8
RNF43-204ENST00000580014 NKTRP30414 1462 aaKnown RBP10.04□□□□□ -0.8
RNF43-204ENST00000580014 EIF3AQ14152 1382 aaKnown RBP10.04□□□□□ -0.8
RNF43-204ENST00000580014 ST20-MTHFSA0A0A6YYL1 179 aa10.04□□□□□ -0.8
RNF43-204ENST00000580014 GNPATO15228 680 aa10.04□□□□□ -0.8
RNF43-204ENST00000580014 HIC1Q14526 733 aa10.04□□□□□ -0.8
RNF43-204ENST00000580014 GPBP1L1Q9HC44 474 aaPredicted RBP10.04□□□□□ -0.8
RNF43-204ENST00000580014 STK26Q9P289 416 aa10.04□□□□□ -0.8
RNF43-204ENST00000580014 KNDC1Q76NI1 1749 aa10.04□□□□□ -0.8
RNF43-204ENST00000580014 CENPJQ9HC77 1338 aaPredicted RBP10.04□□□□□ -0.8
RNF43-204ENST00000580014 CHD2O14647 1828 aaKnown RBP10.03□□□□□ -0.8
RNF43-204ENST00000580014 PRIM1P49642 420 aaKnown RBP10.03□□□□□ -0.8
RNF43-204ENST00000580014 DAXXQ9UER7 740 aaPredicted RBP10.03□□□□□ -0.8
RNF43-204ENST00000580014 WAPLQ7Z5K2 1190 aa10.02□□□□□ -0.81
RNF43-204ENST00000580014 PUS7Q96PZ0 661 aaKnown RBP10.02□□□□□ -0.81
RNF43-204ENST00000580014 PRAM1Q96QH2 718 aa10.02□□□□□ -0.81
RNF43-204ENST00000580014 KDM4CQ9H3R0 1056 aa10.02□□□□□ -0.81
RNF43-204ENST00000580014 PLEKHH1Q9ULM0 1364 aa10.01□□□□□ -0.81
RNF43-204ENST00000580014 IRF6O14896 467 aa10.01□□□□□ -0.81
RNF43-204ENST00000580014 CCDC102AQ96A19 550 aa10.01□□□□□ -0.81
RNF43-204ENST00000580014 EPAS1Q99814 870 aa10.01□□□□□ -0.81
RNF43-204ENST00000580014 ARHGEF28Q8N1W1 1705 aaKnown RBP10.01□□□□□ -0.81
RNF43-204ENST00000580014 ZNF335Q9H4Z2 1342 aaPredicted RBP10.01□□□□□ -0.81
RNF43-204ENST00000580014 PTGDRQ13258 359 aa10□□□□□ -0.81
RNF43-204ENST00000580014 POGKQ9P215 609 aa10□□□□□ -0.81
RNF43-204ENST00000580014 LTBP4Q8N2S1 1624 aa10□□□□□ -0.81
RNF43-204ENST00000580014 LRRC7Q96NW7 1537 aa9.99□□□□□ -0.81
RNF43-204ENST00000580014 PHF14O94880 888 aa9.99□□□□□ -0.81
RNF43-204ENST00000580014 PCDHGA4Q9Y5G9 962 aa9.99□□□□□ -0.81
RNF43-204ENST00000580014 STRCP1A6NGW2 1772 aa9.98□□□□□ -0.81
RNF43-204ENST00000580014 ADGRB2O60241 1585 aa9.98□□□□□ -0.81
RNF43-204ENST00000580014 C11orf95C9JLR9 678 aaPredicted RBP9.98□□□□□ -0.81
RNF43-204ENST00000580014 EN1Q05925 392 aaPredicted RBP9.98□□□□□ -0.81
RNF43-204ENST00000580014 PROSER2Q86WR7 435 aaPredicted RBP9.98□□□□□ -0.81
RNF43-204ENST00000580014 TMEM94Q12767 1356 aa9.98□□□□□ -0.81
RNF43-204ENST00000580014 ADGRL3Q9HAR2 1447 aa9.98□□□□□ -0.81
RNF43-204ENST00000580014 FECHP22830 423 aa9.97□□□□□ -0.81
RNF43-204ENST00000580014 TMF1P82094 1093 aa9.97□□□□□ -0.81
RNF43-204ENST00000580014 C19orf44Q9H6X5 657 aa9.97□□□□□ -0.81
RNF43-204ENST00000580014 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.96□□□□□ -0.81
RNF43-204ENST00000580014 WASLO00401 505 aaPredicted RBP9.96□□□□□ -0.82
RNF43-204ENST00000580014 AMHR2Q16671 573 aa9.96□□□□□ -0.82
RNF43-204ENST00000580014 EVC2Q86UK5 1308 aa9.96□□□□□ -0.82
RNF43-204ENST00000580014 DISP3Q9P2K9 1392 aa9.96□□□□□ -0.82
RNF43-204ENST00000580014 DCCP43146 1447 aa9.96□□□□□ -0.82
RNF43-204ENST00000580014 TULP4Q9NRJ4 1543 aa9.96□□□□□ -0.82
RNF43-204ENST00000580014 CDCA8Q53HL2 280 aa9.95□□□□□ -0.82
RNF43-204ENST00000580014 IL27Q8NEV9 243 aa9.95□□□□□ -0.82
RNF43-204ENST00000580014 HIRIP3Q9BW71 556 aaPredicted RBP9.95□□□□□ -0.82
RNF43-204ENST00000580014 PCDHGA10Q9Y5H3 936 aa9.95□□□□□ -0.82
RNF43-204ENST00000580014 QRICH2Q9H0J4 1663 aa9.94□□□□□ -0.82
RNF43-204ENST00000580014 CDC42BPGQ6DT37 1551 aa9.94□□□□□ -0.82
RNF43-204ENST00000580014 CCDC7Q96M83 1385 aa9.94□□□□□ -0.82
RNF43-204ENST00000580014 KIF7Q2M1P5 1343 aa9.94□□□□□ -0.82
RNF43-204ENST00000580014 WASHC2AQ641Q2 1341 aa9.94□□□□□ -0.82
RNF43-204ENST00000580014 SAFB2Q14151 953 aaKnown RBP eCLIP9.94□□□□□ -0.82
RNF43-204ENST00000580014 TYW1BQ6NUM6 668 aa9.94□□□□□ -0.82
RNF43-204ENST00000580014 CDK19Q9BWU1 502 aa9.94□□□□□ -0.82
RNF43-204ENST00000580014 ANKARQ7Z5J8 1434 aa9.93□□□□□ -0.82
RNF43-204ENST00000580014 MAP3K7O43318 606 aa9.93□□□□□ -0.82
RNF43-204ENST00000580014 C14orf37Q86TY3 774 aa9.93□□□□□ -0.82
RNF43-204ENST00000580014 SLAIN1Q8ND83 568 aa9.93□□□□□ -0.82
RNF43-204ENST00000580014 CDHR5Q9HBB8 845 aa9.93□□□□□ -0.82
RNF43-204ENST00000580014 NPDC1Q9NQX5 325 aaPredicted RBP9.93□□□□□ -0.82
RNF43-204ENST00000580014 IQSEC2Q5JU85 1478 aa9.92□□□□□ -0.82
RNF43-204ENST00000580014 PRR36Q9H6K5 1346 aa9.92□□□□□ -0.82
RNF43-204ENST00000580014 FBXW7Q969H0 707 aa9.92□□□□□ -0.82
RNF43-204ENST00000580014 RBM33Q96EV2 1170 aaKnown RBP9.92□□□□□ -0.82
RNF43-204ENST00000580014 ATAD2Q6PL18 1390 aa9.91□□□□□ -0.82
RNF43-204ENST00000580014 NINLQ9Y2I6 1382 aa9.91□□□□□ -0.82
RNF43-204ENST00000580014 PLEKHG3A1L390 1219 aa9.91□□□□□ -0.82
RNF43-204ENST00000580014 PARP9Q8IXQ6 854 aa9.91□□□□□ -0.82
RNF43-204ENST00000580014 NUDT16Q96DE0 195 aaKnown RBP9.91□□□□□ -0.82
RNF43-204ENST00000580014 ATP7BP35670 1465 aa9.91□□□□□ -0.82
RNF43-204ENST00000580014 NALCNQ8IZF0 1738 aa9.9□□□□□ -0.82
RNF43-204ENST00000580014 MSH6P52701 1360 aa9.9□□□□□ -0.82
RNF43-204ENST00000580014 XIRP1Q702N8 1843 aaKnown RBP9.9□□□□□ -0.82
RNF43-204ENST00000580014 MST1RQ04912 1400 aa9.9□□□□□ -0.83
RNF43-204ENST00000580014 FOSBP53539 338 aa9.89□□□□□ -0.83
RNF43-204ENST00000580014 SRPK2P78362 688 aaKnown RBP9.89□□□□□ -0.83
RNF43-204ENST00000580014 DOK7Q18PE1 504 aa9.89□□□□□ -0.83
RNF43-204ENST00000580014 C1orf167Q5SNV9 1468 aa9.89□□□□□ -0.83
RNF43-204ENST00000580014 FMN2Q9NZ56 1722 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms