RNA–Protein interactions for RNA: ENST00000579539.1

DDX42-210, Transcript of DEAD-box helicase 42, humanhuman

TSL 2

Gene DDX42, Length 571 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX42-210ENST00000579539 AP1G2O75843 785 aa8.4□□□□□ -1.06
DDX42-210ENST00000579539 SH3BP2P78314 561 aa8.4□□□□□ -1.06
DDX42-210ENST00000579539 RTL5Q5HYW3 569 aaPredicted RBP8.4□□□□□ -1.06
DDX42-210ENST00000579539 NUTM2DQ5VT03 806 aaPredicted RBP8.4□□□□□ -1.06
DDX42-210ENST00000579539 NUTM2AQ8IVF1 878 aaPredicted RBP8.4□□□□□ -1.06
DDX42-210ENST00000579539 PRM3Q9NNZ6 103 aa8.4□□□□□ -1.06
DDX42-210ENST00000579539 AAASQ9NRG9 546 aa8.4□□□□□ -1.06
DDX42-210ENST00000579539 J3QL48 77 aa8.39□□□□□ -1.07
DDX42-210ENST00000579539 ST8SIA5O15466 376 aa8.39□□□□□ -1.07
DDX42-210ENST00000579539 SIAH2O43255 324 aa8.39□□□□□ -1.07
DDX42-210ENST00000579539 RFX1P22670 979 aa8.39□□□□□ -1.07
DDX42-210ENST00000579539 FAM9AQ8IZU1 332 aaPredicted RBP8.39□□□□□ -1.07
DDX42-210ENST00000579539 CRIPAKQ8N1N5 446 aa8.39□□□□□ -1.07
DDX42-210ENST00000579539 BAP1Q92560 729 aa8.39□□□□□ -1.07
DDX42-210ENST00000579539 F12P00748 615 aaPredicted RBP8.38□□□□□ -1.07
DDX42-210ENST00000579539 HDGFL1Q5TGJ6 251 aa8.38□□□□□ -1.07
DDX42-210ENST00000579539 ZNF787Q6DD87 383 aa8.38□□□□□ -1.07
DDX42-210ENST00000579539 POTECB2RU33 542 aa8.37□□□□□ -1.07
DDX42-210ENST00000579539 CTHP32929 405 aa8.37□□□□□ -1.07
DDX42-210ENST00000579539 LINC01559Q495D7 138 aa8.37□□□□□ -1.07
DDX42-210ENST00000579539 MAP10Q9P2G4 905 aa8.37□□□□□ -1.07
DDX42-210ENST00000579539 NDUFB9Q9Y6M9 179 aa8.37□□□□□ -1.07
DDX42-210ENST00000579539 CSB-PGBD3P0DP91 1061 aa8.36□□□□□ -1.07
DDX42-210ENST00000579539 EHBP1Q8NDI1 1231 aa8.36□□□□□ -1.07
DDX42-210ENST00000579539 TSC1Q92574 1164 aa8.36□□□□□ -1.07
DDX42-210ENST00000579539 DACH1Q9UI36 760 aa8.36□□□□□ -1.07
DDX42-210ENST00000579539 SMCPP49901 116 aaPredicted RBP8.35□□□□□ -1.07
DDX42-210ENST00000579539 ZNF511Q8NB15 262 aa8.35□□□□□ -1.07
DDX42-210ENST00000579539 PPP1R12CQ9BZL4 782 aa8.35□□□□□ -1.07
DDX42-210ENST00000579539 HMX1Q9NP08 348 aaPredicted RBP8.35□□□□□ -1.07
DDX42-210ENST00000579539 IVNS1ABPQ9Y6Y0 642 aa8.35□□□□□ -1.07
DDX42-210ENST00000579539 AXIN1O15169 862 aa8.34□□□□□ -1.07
DDX42-210ENST00000579539 CTC1Q2NKJ3 1217 aa8.34□□□□□ -1.07
DDX42-210ENST00000579539 CCER1Q8TC90 406 aaPredicted RBP8.34□□□□□ -1.07
DDX42-210ENST00000579539 E9PSI1 815 aa8.33□□□□□ -1.08
DDX42-210ENST00000579539 ALDH1A1P00352 501 aa8.33□□□□□ -1.08
DDX42-210ENST00000579539 HPS1Q92902 700 aa8.33□□□□□ -1.08
DDX42-210ENST00000579539 TRIM34Q9BYJ4 488 aa8.33□□□□□ -1.08
DDX42-210ENST00000579539 CTDSPL2Q05D32 466 aa8.32□□□□□ -1.08
DDX42-210ENST00000579539 VAC14Q08AM6 782 aa8.32□□□□□ -1.08
DDX42-210ENST00000579539 CCDC27Q2M243 656 aa8.32□□□□□ -1.08
DDX42-210ENST00000579539 SND1Q7KZF4 910 aaKnown RBP eCLIP8.32□□□□□ -1.08
DDX42-210ENST00000579539 HELBQ8NG08 1087 aaPredicted RBP8.32□□□□□ -1.08
DDX42-210ENST00000579539 UCN2Q96RP3 112 aa8.32□□□□□ -1.08
DDX42-210ENST00000579539 PALM3A6NDB9 673 aaPredicted RBP8.31□□□□□ -1.08
DDX42-210ENST00000579539 VARSP26640 1264 aaKnown RBP8.31□□□□□ -1.08
DDX42-210ENST00000579539 WASHC4Q2M389 1173 aa8.31□□□□□ -1.08
DDX42-210ENST00000579539 FOXJ1Q92949 421 aa8.31□□□□□ -1.08
DDX42-210ENST00000579539 TMEM88BA6NKF7 163 aa8.3□□□□□ -1.08
DDX42-210ENST00000579539 ALG2Q9H553 416 aa8.3□□□□□ -1.08
DDX42-210ENST00000579539 AMOTL2Q9Y2J4 779 aa8.3□□□□□ -1.08
DDX42-210ENST00000579539 MPNDQ8N594 471 aa8.29□□□□□ -1.08
DDX42-210ENST00000579539 SHROOM4Q9ULL8 1493 aa8.29□□□□□ -1.08
DDX42-210ENST00000579539 LMOD1P29536 600 aaPredicted RBP8.28□□□□□ -1.08
DDX42-210ENST00000579539 C4orf48Q5BLP8 95 aa8.28□□□□□ -1.08
DDX42-210ENST00000579539 TLL2Q9Y6L7 1015 aa8.28□□□□□ -1.08
DDX42-210ENST00000579539 ERICH6BQ5W0A0 696 aa8.27□□□□□ -1.09
DDX42-210ENST00000579539 LRRN4Q8WUT4 740 aa8.27□□□□□ -1.09
DDX42-210ENST00000579539 ZNF775Q96BV0 537 aaPredicted RBP8.27□□□□□ -1.09
DDX42-210ENST00000579539 VRTNQ9H8Y1 702 aa8.27□□□□□ -1.09
DDX42-210ENST00000579539 GMPR2Q9P2T1 348 aaKnown RBP8.27□□□□□ -1.09
DDX42-210ENST00000579539 WASF2Q9Y6W5 498 aa8.27□□□□□ -1.09
DDX42-210ENST00000579539 ATG7O95352 703 aa8.26□□□□□ -1.09
DDX42-210ENST00000579539 ARMC2Q8NEN0 867 aa8.26□□□□□ -1.09
DDX42-210ENST00000579539 ATP13A2Q9NQ11 1180 aa8.26□□□□□ -1.09
DDX42-210ENST00000579539 FAM174AQ8TBP5 190 aa8.25□□□□□ -1.09
DDX42-210ENST00000579539 CDK15Q96Q40 435 aa8.25□□□□□ -1.09
DDX42-210ENST00000579539 TFIP11Q9UBB9 837 aaKnown RBP8.25□□□□□ -1.09
DDX42-210ENST00000579539 CDCA8Q53HL2 280 aa8.24□□□□□ -1.09
DDX42-210ENST00000579539 SH3RF1Q7Z6J0 888 aa8.24□□□□□ -1.09
DDX42-210ENST00000579539 BPHLQ86WA6 291 aaPredicted RBP8.24□□□□□ -1.09
DDX42-210ENST00000579539 EPS8L1Q8TE68 723 aa8.24□□□□□ -1.09
DDX42-210ENST00000579539 MAFBQ9Y5Q3 323 aaPredicted RBP8.24□□□□□ -1.09
DDX42-210ENST00000579539 AGERQ15109 404 aa8.23□□□□□ -1.09
DDX42-210ENST00000579539 SH3BP5LQ7L8J4 393 aa8.23□□□□□ -1.09
DDX42-210ENST00000579539 GNEQ9Y223 722 aaKnown RBP8.23□□□□□ -1.09
DDX42-210ENST00000579539 UNCXA6NJT0 531 aa8.22□□□□□ -1.09
DDX42-210ENST00000579539 C11orf95C9JLR9 678 aaPredicted RBP8.22□□□□□ -1.09
DDX42-210ENST00000579539 NBPF14Q5TI25 921 aa8.22□□□□□ -1.09
DDX42-210ENST00000579539 C1QTNF2Q9BXJ5 285 aa8.22□□□□□ -1.09
DDX42-210ENST00000579539 SUPT16HQ9Y5B9 1047 aaKnown RBP8.22□□□□□ -1.09
DDX42-210ENST00000579539 CAPN5O15484 640 aaPredicted RBP8.21□□□□□ -1.1
DDX42-210ENST00000579539 ADH1CP00326 375 aa8.21□□□□□ -1.1
DDX42-210ENST00000579539 GRM5P41594 1212 aa8.21□□□□□ -1.1
DDX42-210ENST00000579539 NNTQ13423 1086 aa8.21□□□□□ -1.1
DDX42-210ENST00000579539 NR6A1Q15406 480 aa8.21□□□□□ -1.1
DDX42-210ENST00000579539 ARID5BQ14865 1188 aa8.2□□□□□ -1.1
DDX42-210ENST00000579539 TBC1D9Q6ZT07 1266 aa8.2□□□□□ -1.1
DDX42-210ENST00000579539 GPKOWQ92917 476 aaPredicted RBP eCLIP8.2□□□□□ -1.1
DDX42-210ENST00000579539 KLF16Q9BXK1 252 aaPredicted RBP8.2□□□□□ -1.1
DDX42-210ENST00000579539 FKBPLQ9UIM3 349 aa8.2□□□□□ -1.1
DDX42-210ENST00000579539 SNRPBP14678 240 aaKnown RBP8.19□□□□□ -1.1
DDX42-210ENST00000579539 SOX11P35716 441 aa8.19□□□□□ -1.1
DDX42-210ENST00000579539 PDXDC2PQ6P474 469 aa8.19□□□□□ -1.1
DDX42-210ENST00000579539 MAGEB6P1A0A0J9YX57 407 aa8.18□□□□□ -1.1
DDX42-210ENST00000579539 TRIM46Q7Z4K8 759 aa8.18□□□□□ -1.1
DDX42-210ENST00000579539 TRIM47Q96LD4 638 aa8.18□□□□□ -1.1
DDX42-210ENST00000579539 SENP2Q9HC62 589 aa8.18□□□□□ -1.1
DDX42-210ENST00000579539 ZMIZ1Q9ULJ6 1067 aa8.18□□□□□ -1.1
DDX42-210ENST00000579539 ATP9BO43861 1147 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms