RNA–Protein interactions for RNA: ENST00000578995.5

SMARCE1-215, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2

Gene SMARCE1, Length 534 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-215ENST00000578995 VSIG8P0DPA2 414 aa6.02□□□□□ -1.45
SMARCE1-215ENST00000578995 TRIM32Q13049 653 aa6.02□□□□□ -1.45
SMARCE1-215ENST00000578995 PHLDB1Q86UU1 1377 aa6.02□□□□□ -1.45
SMARCE1-215ENST00000578995 CAMSAP2Q08AD1 1489 aa6.02□□□□□ -1.45
SMARCE1-215ENST00000578995 MBD5Q9P267 1494 aa6.02□□□□□ -1.45
SMARCE1-215ENST00000578995 DIP2CQ9Y2E4 1556 aa6.01□□□□□ -1.45
SMARCE1-215ENST00000578995 MYOM3Q5VTT5 1437 aa6.01□□□□□ -1.45
SMARCE1-215ENST00000578995 POGZQ7Z3K3 1410 aa6.01□□□□□ -1.45
SMARCE1-215ENST00000578995 AKNAQ7Z591 1439 aa6.01□□□□□ -1.45
SMARCE1-215ENST00000578995 ZFYVE16Q7Z3T8 1539 aa6.01□□□□□ -1.45
SMARCE1-215ENST00000578995 FMNL1O95466 1100 aaPredicted RBP6.01□□□□□ -1.45
SMARCE1-215ENST00000578995 GPAT2Q6NUI2 795 aa6.01□□□□□ -1.45
SMARCE1-215ENST00000578995 FAM160A2Q8N612 972 aaPredicted RBP6.01□□□□□ -1.45
SMARCE1-215ENST00000578995 ARIH1Q9Y4X5 557 aaPredicted RBP6.01□□□□□ -1.45
SMARCE1-215ENST00000578995 ADGRL1O94910 1474 aa6.01□□□□□ -1.45
SMARCE1-215ENST00000578995 PLXNC1O60486 1568 aa6.01□□□□□ -1.45
SMARCE1-215ENST00000578995 REREQ9P2R6 1566 aa6.01□□□□□ -1.45
SMARCE1-215ENST00000578995 BMP1P13497 986 aa6□□□□□ -1.45
SMARCE1-215ENST00000578995 TRIM46Q7Z4K8 759 aa6□□□□□ -1.45
SMARCE1-215ENST00000578995 THAP11Q96EK4 314 aa6□□□□□ -1.45
SMARCE1-215ENST00000578995 DNMT3AQ9Y6K1 912 aaPredicted RBP6□□□□□ -1.45
SMARCE1-215ENST00000578995 FGD6Q6ZV73 1430 aa5.99□□□□□ -1.45
SMARCE1-215ENST00000578995 MIA2Q96PC5 1412 aa5.99□□□□□ -1.45
SMARCE1-215ENST00000578995 TRAPPC8Q9Y2L5 1435 aa5.99□□□□□ -1.45
SMARCE1-215ENST00000578995 FOXK2Q01167 660 aa5.99□□□□□ -1.45
SMARCE1-215ENST00000578995 ATP1B4Q9UN42 357 aaPredicted RBP5.99□□□□□ -1.45
SMARCE1-215ENST00000578995 CDK11AQ9UQ88 783 aaPredicted RBP5.99□□□□□ -1.45
SMARCE1-215ENST00000578995 ADGRG1Q9Y653 693 aa5.99□□□□□ -1.45
SMARCE1-215ENST00000578995 KIAA1107Q9UPP5 1409 aa5.99□□□□□ -1.45
SMARCE1-215ENST00000578995 MLH3Q9UHC1 1453 aa5.98□□□□□ -1.45
SMARCE1-215ENST00000578995 CAPN5O15484 640 aaPredicted RBP5.98□□□□□ -1.45
SMARCE1-215ENST00000578995 MORN1Q5T089 497 aa5.98□□□□□ -1.45
SMARCE1-215ENST00000578995 ATP7AQ04656 1500 aa5.98□□□□□ -1.45
SMARCE1-215ENST00000578995 RRBP1Q9P2E9 1410 aaKnown RBP5.98□□□□□ -1.45
SMARCE1-215ENST00000578995 ADAMTSL3P82987 1691 aa5.98□□□□□ -1.45
SMARCE1-215ENST00000578995 GCC2Q8IWJ2 1684 aa5.98□□□□□ -1.45
SMARCE1-215ENST00000578995 DENND4BO75064 1496 aaPredicted RBP5.97□□□□□ -1.45
SMARCE1-215ENST00000578995 ZNF518AQ6AHZ1 1483 aa5.97□□□□□ -1.45
SMARCE1-215ENST00000578995 PLEKHH2Q8IVE3 1493 aa5.97□□□□□ -1.45
SMARCE1-215ENST00000578995 SHANK2Q9UPX8 1470 aa5.97□□□□□ -1.45
SMARCE1-215ENST00000578995 CCNB3Q8WWL7 1395 aa5.97□□□□□ -1.45
SMARCE1-215ENST00000578995 DEPDC5O75140 1603 aa5.97□□□□□ -1.45
SMARCE1-215ENST00000578995 MROH1Q8NDA8 1641 aa5.97□□□□□ -1.45
SMARCE1-215ENST00000578995 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP5.97□□□□□ -1.45
SMARCE1-215ENST00000578995 MSS51Q4VC12 460 aa5.97□□□□□ -1.45
SMARCE1-215ENST00000578995 PSMG3-AS1Q96PY0 264 aa5.97□□□□□ -1.45
SMARCE1-215ENST00000578995 SALL2Q9Y467 1007 aaPredicted RBP5.97□□□□□ -1.45
SMARCE1-215ENST00000578995 SCAPERQ9BY12 1400 aa5.97□□□□□ -1.45
SMARCE1-215ENST00000578995 CCDC141Q6ZP82 1450 aa5.96□□□□□ -1.45
SMARCE1-215ENST00000578995 MAGI2Q86UL8 1455 aa5.96□□□□□ -1.45
SMARCE1-215ENST00000578995 RNF17Q9BXT8 1623 aaKnown RBP5.96□□□□□ -1.45
SMARCE1-215ENST00000578995 EIF2AK4Q9P2K8 1649 aaKnown RBP5.96□□□□□ -1.45
SMARCE1-215ENST00000578995 ALDH1A1P00352 501 aa5.96□□□□□ -1.46
SMARCE1-215ENST00000578995 E2F4Q16254 413 aa5.96□□□□□ -1.46
SMARCE1-215ENST00000578995 RC3H1Q5TC82 1133 aaKnown RBP5.96□□□□□ -1.46
SMARCE1-215ENST00000578995 PRDM9Q9NQV7 894 aa5.96□□□□□ -1.46
SMARCE1-215ENST00000578995 ADAMTS8Q9UP79 889 aa5.96□□□□□ -1.46
SMARCE1-215ENST00000578995 YEATS2Q9ULM3 1422 aa5.96□□□□□ -1.46
SMARCE1-215ENST00000578995 ZNF644Q9H582 1327 aaPredicted RBP5.96□□□□□ -1.46
SMARCE1-215ENST00000578995 FER1L4A9Z1Z3 1794 aa5.95□□□□□ -1.46
SMARCE1-215ENST00000578995 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.95□□□□□ -1.46
SMARCE1-215ENST00000578995 ABCC5O15440 1437 aa5.95□□□□□ -1.46
SMARCE1-215ENST00000578995 PTPRKQ15262 1439 aa5.95□□□□□ -1.46
SMARCE1-215ENST00000578995 KRTAP9-2Q9BYQ4 174 aa5.95□□□□□ -1.46
SMARCE1-215ENST00000578995 ADGRL2O95490 1459 aa5.95□□□□□ -1.46
SMARCE1-215ENST00000578995 AGLP35573 1532 aa5.94□□□□□ -1.46
SMARCE1-215ENST00000578995 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP5.94□□□□□ -1.46
SMARCE1-215ENST00000578995 DAPK1P53355 1430 aa5.94□□□□□ -1.46
SMARCE1-215ENST00000578995 FECHP22830 423 aa5.94□□□□□ -1.46
SMARCE1-215ENST00000578995 EFCAB2Q5VUJ9 269 aa5.94□□□□□ -1.46
SMARCE1-215ENST00000578995 ZFP42Q96MM3 310 aa5.94□□□□□ -1.46
SMARCE1-215ENST00000578995 MROH2AA6NES4 1674 aa5.94□□□□□ -1.46
SMARCE1-215ENST00000578995 CEP152O94986 1710 aa5.94□□□□□ -1.46
SMARCE1-215ENST00000578995 RTEL1-TNFRSF6BF6WH68 1400 aa5.93□□□□□ -1.46
SMARCE1-215ENST00000578995 RAPGEF3O95398 923 aa5.93□□□□□ -1.46
SMARCE1-215ENST00000578995 ATP6V1AP38606 617 aa5.93□□□□□ -1.46
SMARCE1-215ENST00000578995 WNT7BP56706 349 aa5.93□□□□□ -1.46
SMARCE1-215ENST00000578995 BRICD5Q6PL45 260 aa5.93□□□□□ -1.46
SMARCE1-215ENST00000578995 SLC27A5Q9Y2P5 690 aa5.93□□□□□ -1.46
SMARCE1-215ENST00000578995 UNC13BO14795 1591 aa5.93□□□□□ -1.46
SMARCE1-215ENST00000578995 MADDQ8WXG6 1647 aa5.92□□□□□ -1.46
SMARCE1-215ENST00000578995 ADAM23O75077 832 aa5.92□□□□□ -1.46
SMARCE1-215ENST00000578995 PTGDRQ13258 359 aa5.92□□□□□ -1.46
SMARCE1-215ENST00000578995 CFDP1Q9UEE9 299 aaPredicted RBP5.92□□□□□ -1.46
SMARCE1-215ENST00000578995 WASF2Q9Y6W5 498 aa5.92□□□□□ -1.46
SMARCE1-215ENST00000578995 VWDEQ8N2E2 1590 aa5.92□□□□□ -1.46
SMARCE1-215ENST00000578995 C3P01024 1663 aa5.91□□□□□ -1.46
SMARCE1-215ENST00000578995 CLTCQ00610 1675 aaKnown RBP5.91□□□□□ -1.46
SMARCE1-215ENST00000578995 ZC3H13Q5T200 1668 aaKnown RBP5.91□□□□□ -1.46
SMARCE1-215ENST00000578995 RIMS1Q86UR5 1692 aaKnown RBP5.91□□□□□ -1.46
SMARCE1-215ENST00000578995 C9orf84Q5VXU9 1444 aa5.91□□□□□ -1.46
SMARCE1-215ENST00000578995 ATP10AO60312 1499 aa5.91□□□□□ -1.46
SMARCE1-215ENST00000578995 PRDM15P57071 1507 aaPredicted RBP5.91□□□□□ -1.46
SMARCE1-215ENST00000578995 KRTAP9-6A0A140TA67 174 aa5.91□□□□□ -1.46
SMARCE1-215ENST00000578995 KANK3Q6NY19 840 aa5.91□□□□□ -1.46
SMARCE1-215ENST00000578995 DUOX2Q9NRD8 1548 aa5.9□□□□□ -1.46
SMARCE1-215ENST00000578995 IRS1P35568 1242 aa5.9□□□□□ -1.46
SMARCE1-215ENST00000578995 MMP16P51512 607 aa5.9□□□□□ -1.46
SMARCE1-215ENST00000578995 HNRNPMP52272 730 aaKnown RBP eCLIP5.9□□□□□ -1.46
SMARCE1-215ENST00000578995 SKOR1P84550 965 aa5.9□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms