RNA–Protein interactions for RNA: ENST00000577721.5

SMARCE1-212, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 449 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-212ENST00000577721 XPCQ01831 940 aaPredicted RBP10.32□□□□□ -0.76
SMARCE1-212ENST00000577721 STK26Q9P289 416 aa10.32□□□□□ -0.76
SMARCE1-212ENST00000577721 RPGRIP1LQ68CZ1 1315 aa10.32□□□□□ -0.76
SMARCE1-212ENST00000577721 FOXO3O43524 673 aa10.31□□□□□ -0.76
SMARCE1-212ENST00000577721 Q6ZNB5 142 aa10.31□□□□□ -0.76
SMARCE1-212ENST00000577721 RNF25Q96BH1 459 aaPredicted RBP10.31□□□□□ -0.76
SMARCE1-212ENST00000577721 TAOK2Q9UL54 1235 aa10.31□□□□□ -0.76
SMARCE1-212ENST00000577721 NPHP3Q7Z494 1330 aa10.31□□□□□ -0.76
SMARCE1-212ENST00000577721 XRN1Q8IZH2 1706 aaKnown RBP10.3□□□□□ -0.76
SMARCE1-212ENST00000577721 NRXN3Q9Y4C0 1643 aa10.3□□□□□ -0.76
SMARCE1-212ENST00000577721 CCDC125Q86Z20 511 aa10.3□□□□□ -0.76
SMARCE1-212ENST00000577721 HAP1P54257 671 aaPredicted RBP10.29□□□□□ -0.76
SMARCE1-212ENST00000577721 RGL3Q3MIN7 710 aa10.29□□□□□ -0.76
SMARCE1-212ENST00000577721 GJD4Q96KN9 370 aaPredicted RBP10.29□□□□□ -0.76
SMARCE1-212ENST00000577721 PTCH1Q13635 1447 aa10.29□□□□□ -0.76
SMARCE1-212ENST00000577721 NHSL1Q5SYE7 1610 aa10.29□□□□□ -0.76
SMARCE1-212ENST00000577721 NEXMIFQ5QGS0 1516 aa10.28□□□□□ -0.76
SMARCE1-212ENST00000577721 HFM1A2PYH4 1435 aa10.28□□□□□ -0.76
SMARCE1-212ENST00000577721 WAPLQ7Z5K2 1190 aa10.28□□□□□ -0.76
SMARCE1-212ENST00000577721 LRPPRCP42704 1394 aaKnown RBP10.27□□□□□ -0.76
SMARCE1-212ENST00000577721 ATRNO75882 1429 aa10.27□□□□□ -0.77
SMARCE1-212ENST00000577721 KCNK17Q96T54 332 aa10.27□□□□□ -0.77
SMARCE1-212ENST00000577721 BCL11BQ9C0K0 894 aaPredicted RBP10.27□□□□□ -0.77
SMARCE1-212ENST00000577721 SF3B2Q13435 895 aaKnown RBP10.26□□□□□ -0.77
SMARCE1-212ENST00000577721 UNC5CLQ8IV45 518 aa10.26□□□□□ -0.77
SMARCE1-212ENST00000577721 MFRPQ9BY79 579 aa10.26□□□□□ -0.77
SMARCE1-212ENST00000577721 CCDC9Q9Y3X0 531 aaKnown RBP10.26□□□□□ -0.77
SMARCE1-212ENST00000577721 SPHKAPQ2M3C7 1700 aa10.26□□□□□ -0.77
SMARCE1-212ENST00000577721 CLTCL1P53675 1640 aa10.25□□□□□ -0.77
SMARCE1-212ENST00000577721 GOLGA8CPA6NN73 597 aa10.25□□□□□ -0.77
SMARCE1-212ENST00000577721 TMEM132EQ6IEE7 984 aa10.25□□□□□ -0.77
SMARCE1-212ENST00000577721 LMOD2Q6P5Q4 547 aa10.25□□□□□ -0.77
SMARCE1-212ENST00000577721 KRT28Q7Z3Y7 464 aa10.25□□□□□ -0.77
SMARCE1-212ENST00000577721 STK24Q9Y6E0 443 aa10.25□□□□□ -0.77
SMARCE1-212ENST00000577721 ADGRF5Q8IZF2 1346 aa10.25□□□□□ -0.77
SMARCE1-212ENST00000577721 NAIPQ13075 1403 aa10.24□□□□□ -0.77
SMARCE1-212ENST00000577721 NALCNQ8IZF0 1738 aa10.24□□□□□ -0.77
SMARCE1-212ENST00000577721 PTCD2Q8WV60 388 aaKnown RBP10.24□□□□□ -0.77
SMARCE1-212ENST00000577721 VPS9D1Q9Y2B5 631 aa10.24□□□□□ -0.77
SMARCE1-212ENST00000577721 BCL9LQ86UU0 1499 aa10.23□□□□□ -0.77
SMARCE1-212ENST00000577721 PSME1Q06323 249 aa10.23□□□□□ -0.77
SMARCE1-212ENST00000577721 THSD4Q6ZMP0 1018 aa10.23□□□□□ -0.77
SMARCE1-212ENST00000577721 MYT1Q01538 1121 aa10.22□□□□□ -0.77
SMARCE1-212ENST00000577721 DEFB132Q7Z7B7 95 aa10.22□□□□□ -0.77
SMARCE1-212ENST00000577721 SEPT12Q8IYM1 358 aa10.22□□□□□ -0.77
SMARCE1-212ENST00000577721 SPATA31A3Q5VYP0 1347 aa10.22□□□□□ -0.77
SMARCE1-212ENST00000577721 MYOM2P54296 1465 aa10.22□□□□□ -0.77
SMARCE1-212ENST00000577721 TBC1D12O60347 775 aa10.21□□□□□ -0.77
SMARCE1-212ENST00000577721 CABLES1Q8TDN4 633 aa10.21□□□□□ -0.77
SMARCE1-212ENST00000577721 PXDNQ92626 1479 aa10.2□□□□□ -0.78
SMARCE1-212ENST00000577721 PLEKHH1Q9ULM0 1364 aa10.2□□□□□ -0.78
SMARCE1-212ENST00000577721 KIF1BO60333 1816 aa10.19□□□□□ -0.78
SMARCE1-212ENST00000577721 CCDC144AA2RUR9 1427 aa10.19□□□□□ -0.78
SMARCE1-212ENST00000577721 BLMP54132 1417 aaPredicted RBP10.19□□□□□ -0.78
SMARCE1-212ENST00000577721 PRAG1Q86YV5 1406 aa10.19□□□□□ -0.78
SMARCE1-212ENST00000577721 ABCC11Q96J66 1382 aa10.19□□□□□ -0.78
SMARCE1-212ENST00000577721 ANKRD30BQ9BXX2 1392 aa10.19□□□□□ -0.78
SMARCE1-212ENST00000577721 SAFB2Q14151 953 aaKnown RBP eCLIP10.19□□□□□ -0.78
SMARCE1-212ENST00000577721 VPS72Q15906 364 aa10.19□□□□□ -0.78
SMARCE1-212ENST00000577721 KRT27Q7Z3Y8 459 aa10.19□□□□□ -0.78
SMARCE1-212ENST00000577721 WNT2BQ93097 391 aa10.19□□□□□ -0.78
SMARCE1-212ENST00000577721 MPHOSPH9Q99550 1183 aa10.19□□□□□ -0.78
SMARCE1-212ENST00000577721 LAMC1P11047 1609 aa10.18□□□□□ -0.78
SMARCE1-212ENST00000577721 RALGAPBQ86X10 1494 aa10.18□□□□□ -0.78
SMARCE1-212ENST00000577721 RRBP1Q9P2E9 1410 aaKnown RBP10.18□□□□□ -0.78
SMARCE1-212ENST00000577721 POGKQ9P215 609 aa10.18□□□□□ -0.78
SMARCE1-212ENST00000577721 PMFBP1Q8TBY8 1022 aa10.17□□□□□ -0.78
SMARCE1-212ENST00000577721 SIRT1Q96EB6 747 aa10.17□□□□□ -0.78
SMARCE1-212ENST00000577721 COL22A1Q8NFW1 1626 aaPredicted RBP10.17□□□□□ -0.78
SMARCE1-212ENST00000577721 FAM83GA6ND36 823 aa10.16□□□□□ -0.78
SMARCE1-212ENST00000577721 BAG6P46379 1132 aa10.16□□□□□ -0.78
SMARCE1-212ENST00000577721 CFAP70Q5T0N1 1121 aa10.16□□□□□ -0.78
SMARCE1-212ENST00000577721 PRAM1Q96QH2 718 aa10.16□□□□□ -0.78
SMARCE1-212ENST00000577721 SLC4A5Q9BY07 1137 aa10.16□□□□□ -0.78
SMARCE1-212ENST00000577721 CDC42BPGQ6DT37 1551 aa10.16□□□□□ -0.78
SMARCE1-212ENST00000577721 SLIT2O94813 1529 aa10.16□□□□□ -0.78
SMARCE1-212ENST00000577721 YTHDC2Q9H6S0 1430 aaKnown RBP10.16□□□□□ -0.78
SMARCE1-212ENST00000577721 DHX57Q6P158 1386 aaKnown RBP10.15□□□□□ -0.78
SMARCE1-212ENST00000577721 FAM98CQ17RN3 349 aaKnown RBP10.15□□□□□ -0.78
SMARCE1-212ENST00000577721 MRPL50Q8N5N7 158 aaKnown RBP10.15□□□□□ -0.78
SMARCE1-212ENST00000577721 C14orf93Q9H972 538 aaKnown RBP10.15□□□□□ -0.78
SMARCE1-212ENST00000577721 STK25O00506 426 aa10.14□□□□□ -0.79
SMARCE1-212ENST00000577721 ONECUT3O60422 494 aaPredicted RBP10.14□□□□□ -0.79
SMARCE1-212ENST00000577721 BTG4Q9NY30 223 aa10.14□□□□□ -0.79
SMARCE1-212ENST00000577721 TECPR2O15040 1411 aa10.14□□□□□ -0.79
SMARCE1-212ENST00000577721 ARHGEF10O15013 1369 aa10.14□□□□□ -0.79
SMARCE1-212ENST00000577721 LAPTM4AQ15012 233 aa10.13□□□□□ -0.79
SMARCE1-212ENST00000577721 TNS3Q68CZ2 1445 aa10.13□□□□□ -0.79
SMARCE1-212ENST00000577721 SBNO1A3KN83 1393 aa10.13□□□□□ -0.79
SMARCE1-212ENST00000577721 EN1Q05925 392 aaPredicted RBP10.12□□□□□ -0.79
SMARCE1-212ENST00000577721 HIRIP3Q9BW71 556 aaPredicted RBP10.12□□□□□ -0.79
SMARCE1-212ENST00000577721 SPATA31E1Q6ZUB1 1445 aa10.12□□□□□ -0.79
SMARCE1-212ENST00000577721 GLI3P10071 1580 aa10.12□□□□□ -0.79
SMARCE1-212ENST00000577721 PIK3C2GO75747 1445 aa10.11□□□□□ -0.79
SMARCE1-212ENST00000577721 BHMG1C9JSJ3 638 aaPredicted RBP10.11□□□□□ -0.79
SMARCE1-212ENST00000577721 FAM182BQ5T319 152 aa10.11□□□□□ -0.79
SMARCE1-212ENST00000577721 PLPP6Q8IY26 295 aa10.11□□□□□ -0.79
SMARCE1-212ENST00000577721 NGDNQ8NEJ9 315 aaKnown RBP10.11□□□□□ -0.79
SMARCE1-212ENST00000577721 TRAK1Q9UPV9 953 aa10.11□□□□□ -0.79
SMARCE1-212ENST00000577721 KDM2AQ9Y2K7 1162 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms