RNA–Protein interactions for RNA: ENST00000576484.1

CDC27-219, Transcript of cell division cycle 27, humanhuman

TSL 5

Gene CDC27, Length 548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-219ENST00000576484 SIAH2O43255 324 aa9.98□□□□□ -0.81
CDC27-219ENST00000576484 SMPD1P17405 629 aa9.98□□□□□ -0.81
CDC27-219ENST00000576484 SOX11P35716 441 aa9.98□□□□□ -0.81
CDC27-219ENST00000576484 TRAF7Q6Q0C0 670 aa9.98□□□□□ -0.81
CDC27-219ENST00000576484 TRMT44Q8IYL2 757 aaKnown RBP9.98□□□□□ -0.81
CDC27-219ENST00000576484 HDGFL1Q5TGJ6 251 aa9.97□□□□□ -0.81
CDC27-219ENST00000576484 SLC10A4Q96EP9 437 aa9.97□□□□□ -0.81
CDC27-219ENST00000576484 SEMA3FQ13275 785 aa9.96□□□□□ -0.82
CDC27-219ENST00000576484 DZIP3Q86Y13 1208 aaKnown RBP9.96□□□□□ -0.82
CDC27-219ENST00000576484 CALR3Q96L12 384 aaKnown RBP9.96□□□□□ -0.82
CDC27-219ENST00000576484 HPS1Q92902 700 aa9.95□□□□□ -0.82
CDC27-219ENST00000576484 MYT1Q01538 1121 aa9.94□□□□□ -0.82
CDC27-219ENST00000576484 ST8SIA5O15466 376 aa9.93□□□□□ -0.82
CDC27-219ENST00000576484 UCN2Q96RP3 112 aa9.93□□□□□ -0.82
CDC27-219ENST00000576484 LCE2BO14633 110 aa9.92□□□□□ -0.82
CDC27-219ENST00000576484 MCCD1P59942 119 aaPredicted RBP9.92□□□□□ -0.82
CDC27-219ENST00000576484 CCDC82Q8N4S0 544 aa9.92□□□□□ -0.82
CDC27-219ENST00000576484 ZNF592Q92610 1267 aa9.92□□□□□ -0.82
CDC27-219ENST00000576484 CEP126Q9P2H0 1117 aa9.92□□□□□ -0.82
CDC27-219ENST00000576484 MAP4K5Q9Y4K4 846 aa9.92□□□□□ -0.82
CDC27-219ENST00000576484 PIK3CDO00329 1044 aa9.91□□□□□ -0.82
CDC27-219ENST00000576484 VASH1Q7L8A9 365 aaPredicted RBP9.91□□□□□ -0.82
CDC27-219ENST00000576484 CDK15Q96Q40 435 aa9.91□□□□□ -0.82
CDC27-219ENST00000576484 CDV3Q9UKY7 258 aaKnown RBP9.91□□□□□ -0.82
CDC27-219ENST00000576484 NBPF20Q3BBV1 942 aa9.9□□□□□ -0.82
CDC27-219ENST00000576484 MPNDQ8N594 471 aa9.9□□□□□ -0.82
CDC27-219ENST00000576484 ESPNB1AK53 854 aa9.89□□□□□ -0.83
CDC27-219ENST00000576484 AXIN1O15169 862 aa9.89□□□□□ -0.83
CDC27-219ENST00000576484 GIGYF1O75420 1035 aaPredicted RBP9.89□□□□□ -0.83
CDC27-219ENST00000576484 FSHRP23945 695 aa9.89□□□□□ -0.83
CDC27-219ENST00000576484 NNTQ13423 1086 aa9.89□□□□□ -0.83
CDC27-219ENST00000576484 KCTD15Q96SI1 283 aaPredicted RBP9.89□□□□□ -0.83
CDC27-219ENST00000576484 ADH1CP00326 375 aa9.88□□□□□ -0.83
CDC27-219ENST00000576484 GRM5P41594 1212 aa9.88□□□□□ -0.83
CDC27-219ENST00000576484 AAASQ9NRG9 546 aa9.88□□□□□ -0.83
CDC27-219ENST00000576484 AVPP01185 164 aa9.87□□□□□ -0.83
CDC27-219ENST00000576484 RAB15P59190 212 aa9.87□□□□□ -0.83
CDC27-219ENST00000576484 INTS6LQ5JSJ4 861 aaKnown RBP9.87□□□□□ -0.83
CDC27-219ENST00000576484 PHTF2Q8N3S3 785 aa9.87□□□□□ -0.83
CDC27-219ENST00000576484 CCDC97Q96F63 343 aaPredicted RBP9.87□□□□□ -0.83
CDC27-219ENST00000576484 SLFNL1Q499Z3 407 aa9.86□□□□□ -0.83
CDC27-219ENST00000576484 TBC1D9Q6ZT07 1266 aa9.86□□□□□ -0.83
CDC27-219ENST00000576484 RNF135Q8IUD6 432 aa9.86□□□□□ -0.83
CDC27-219ENST00000576484 CCDC85AQ96PX6 553 aaPredicted RBP9.85□□□□□ -0.83
CDC27-219ENST00000576484 ARID3AQ99856 593 aa9.85□□□□□ -0.83
CDC27-219ENST00000576484 PPP1R12CQ9BZL4 782 aa9.85□□□□□ -0.83
CDC27-219ENST00000576484 DACH1Q9UI36 760 aa9.85□□□□□ -0.83
CDC27-219ENST00000576484 SERPINA10Q9UK55 444 aa9.85□□□□□ -0.83
CDC27-219ENST00000576484 PALM3A6NDB9 673 aaPredicted RBP9.84□□□□□ -0.83
CDC27-219ENST00000576484 CAPN5O15484 640 aaPredicted RBP9.84□□□□□ -0.83
CDC27-219ENST00000576484 NR3C2P08235 984 aa9.84□□□□□ -0.83
CDC27-219ENST00000576484 WDR4P57081 412 aaKnown RBP9.84□□□□□ -0.83
CDC27-219ENST00000576484 NR5A1Q13285 461 aa9.84□□□□□ -0.83
CDC27-219ENST00000576484 CTC1Q2NKJ3 1217 aa9.84□□□□□ -0.83
CDC27-219ENST00000576484 SEPT12Q8IYM1 358 aa9.84□□□□□ -0.83
CDC27-219ENST00000576484 SKIP12755 728 aa9.83□□□□□ -0.84
CDC27-219ENST00000576484 TSGA10IPQ3SY00 556 aa9.83□□□□□ -0.84
CDC27-219ENST00000576484 NFATC2IPQ8NCF5 419 aa9.83□□□□□ -0.84
CDC27-219ENST00000576484 CHIC2Q9UKJ5 165 aa9.83□□□□□ -0.84
CDC27-219ENST00000576484 ATP9BO43861 1147 aa9.82□□□□□ -0.84
CDC27-219ENST00000576484 CFAP70Q5T0N1 1121 aa9.82□□□□□ -0.84
CDC27-219ENST00000576484 RNF20Q5VTR2 975 aa9.82□□□□□ -0.84
CDC27-219ENST00000576484 PLPP7Q8NBV4 271 aa9.82□□□□□ -0.84
CDC27-219ENST00000576484 TFIP11Q9UBB9 837 aaKnown RBP9.82□□□□□ -0.84
CDC27-219ENST00000576484 MAFBQ9Y5Q3 323 aaPredicted RBP9.82□□□□□ -0.84
CDC27-219ENST00000576484 USP17L5A8MUK1 530 aa9.81□□□□□ -0.84
CDC27-219ENST00000576484 ERVH48-1M5A8F1 160 aa9.81□□□□□ -0.84
CDC27-219ENST00000576484 CCDC116Q8IYX3 515 aa9.81□□□□□ -0.84
CDC27-219ENST00000576484 ZIC2O95409 532 aaPredicted RBP9.8□□□□□ -0.84
CDC27-219ENST00000576484 CRIPAKQ8N1N5 446 aa9.8□□□□□ -0.84
CDC27-219ENST00000576484 CDCA7Q9BWT1 371 aaPredicted RBP9.8□□□□□ -0.84
CDC27-219ENST00000576484 ZFAND3Q9H8U3 227 aa9.8□□□□□ -0.84
CDC27-219ENST00000576484 DOLKQ9UPQ8 538 aa9.8□□□□□ -0.84
CDC27-219ENST00000576484 PCDHB11Q9Y5F2 797 aa9.8□□□□□ -0.84
CDC27-219ENST00000576484 USP17L3A6NCW0 530 aa9.79□□□□□ -0.84
CDC27-219ENST00000576484 USP17L4A6NCW7 530 aa9.79□□□□□ -0.84
CDC27-219ENST00000576484 BMP1P13497 986 aa9.79□□□□□ -0.84
CDC27-219ENST00000576484 SMCPP49901 116 aaPredicted RBP9.79□□□□□ -0.84
CDC27-219ENST00000576484 PPP1R26Q5T8A7 1209 aaPredicted RBP9.79□□□□□ -0.84
CDC27-219ENST00000576484 ZNF787Q6DD87 383 aa9.79□□□□□ -0.84
CDC27-219ENST00000576484 USP17L2Q6R6M4 530 aa9.79□□□□□ -0.84
CDC27-219ENST00000576484 USP17L1Q7RTZ2 530 aa9.79□□□□□ -0.84
CDC27-219ENST00000576484 DEPDC4Q8N2C3 294 aa9.79□□□□□ -0.84
CDC27-219ENST00000576484 ITPKCQ96DU7 683 aa9.79□□□□□ -0.84
CDC27-219ENST00000576484 TMPRSS4Q9NRS4 437 aa9.79□□□□□ -0.84
CDC27-219ENST00000576484 POTECB2RU33 542 aa9.78□□□□□ -0.84
CDC27-219ENST00000576484 TIMP2P16035 220 aa9.78□□□□□ -0.84
CDC27-219ENST00000576484 LMOD1P29536 600 aaPredicted RBP9.78□□□□□ -0.84
CDC27-219ENST00000576484 RFX1P22670 979 aa9.77□□□□□ -0.85
CDC27-219ENST00000576484 DHX9Q08211 1270 aaKnown RBP9.77□□□□□ -0.85
CDC27-219ENST00000576484 NCOA4Q13772 614 aa9.77□□□□□ -0.85
CDC27-219ENST00000576484 MAP7D1Q3KQU3 841 aa9.77□□□□□ -0.85
CDC27-219ENST00000576484 OXLD1Q5BKU9 147 aa9.77□□□□□ -0.85
CDC27-219ENST00000576484 PLEKHM2Q8IWE5 1019 aa9.77□□□□□ -0.85
CDC27-219ENST00000576484 ATP13A2Q9NQ11 1180 aa9.77□□□□□ -0.85
CDC27-219ENST00000576484 GMPR2Q9P2T1 348 aaKnown RBP9.77□□□□□ -0.85
CDC27-219ENST00000576484 SCTRP47872 440 aa9.76□□□□□ -0.85
CDC27-219ENST00000576484 CCDC125Q86Z20 511 aa9.76□□□□□ -0.85
CDC27-219ENST00000576484 ZNF784Q8NCA9 323 aaPredicted RBP9.76□□□□□ -0.85
CDC27-219ENST00000576484 KLF16Q9BXK1 252 aaPredicted RBP9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms