RNA–Protein interactions for RNA: ENST00000575333.5

TOM1L1-220, Transcript of target of myb1 like 1 membrane trafficking protein, humanhuman

TSL 1 (best) BASIC

Gene TOM1L1, Length 1,849 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1L1-220ENST00000575333 BOLA1Q9Y3E2 137 aa9.73□□□□□ -0.85
TOM1L1-220ENST00000575333 DHX16O60231 1041 aaKnown RBP9.72□□□□□ -0.85
TOM1L1-220ENST00000575333 CLEC17AQ6ZS10 378 aa9.72□□□□□ -0.85
TOM1L1-220ENST00000575333 KRT222Q8N1A0 295 aa9.72□□□□□ -0.85
TOM1L1-220ENST00000575333 PIBF1Q8WXW3 757 aa9.72□□□□□ -0.85
TOM1L1-220ENST00000575333 DDX41Q9UJV9 622 aaKnown RBP9.72□□□□□ -0.85
TOM1L1-220ENST00000575333 DHX29Q7Z478 1369 aaKnown RBP9.72□□□□□ -0.85
TOM1L1-220ENST00000575333 CTIFO43310 598 aaKnown RBP9.72□□□□□ -0.85
TOM1L1-220ENST00000575333 MUM1L1Q5H9M0 696 aa9.72□□□□□ -0.85
TOM1L1-220ENST00000575333 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.72□□□□□ -0.857e-7■■□□□ 13.6
TOM1L1-220ENST00000575333 LARP6Q9BRS8 491 aaKnown RBP9.72□□□□□ -0.85
TOM1L1-220ENST00000575333 WDR70Q9NW82 654 aa9.72□□□□□ -0.85
TOM1L1-220ENST00000575333 RSPH14Q9UHP6 348 aa9.72□□□□□ -0.85
TOM1L1-220ENST00000575333 MIA2Q96PC5 1412 aa9.71□□□□□ -0.85
TOM1L1-220ENST00000575333 KIF3CO14782 793 aa9.71□□□□□ -0.85
TOM1L1-220ENST00000575333 REC8O95072 547 aa9.71□□□□□ -0.85
TOM1L1-220ENST00000575333 U2AF2P26368 475 aaKnown RBP eCLIP9.71□□□□□ -0.85
TOM1L1-220ENST00000575333 DDIT3P35638 169 aa9.71□□□□□ -0.85
TOM1L1-220ENST00000575333 ZKSCAN8Q15776 578 aaPredicted RBP9.71□□□□□ -0.85
TOM1L1-220ENST00000575333 HSCBQ8IWL3 235 aa9.71□□□□□ -0.85
TOM1L1-220ENST00000575333 TMEM121BQ9BXQ6 578 aaPredicted RBP9.71□□□□□ -0.85
TOM1L1-220ENST00000575333 CRISPLD2Q9H0B8 497 aa9.71□□□□□ -0.85
TOM1L1-220ENST00000575333 KNSTRNQ9Y448 316 aa9.71□□□□□ -0.85
TOM1L1-220ENST00000575333 TRDNQ13061 729 aa9.7□□□□□ -0.86
TOM1L1-220ENST00000575333 CYB5RLQ6IPT4 315 aa9.7□□□□□ -0.86
TOM1L1-220ENST00000575333 RPAINQ86UA6 219 aa9.7□□□□□ -0.86
TOM1L1-220ENST00000575333 CHMP4CQ96CF2 233 aa9.7□□□□□ -0.86
TOM1L1-220ENST00000575333 TERF2IPQ9NYB0 399 aa9.7□□□□□ -0.86
TOM1L1-220ENST00000575333 SH3BP1Q9Y3L3 701 aa9.7□□□□□ -0.86
TOM1L1-220ENST00000575333 ZNF853P0CG23 659 aa9.7□□□□□ -0.86
TOM1L1-220ENST00000575333 FKBP5Q13451 457 aaPredicted RBP9.7□□□□□ -0.86
TOM1L1-220ENST00000575333 RAB3GAP1Q15042 981 aa9.7□□□□□ -0.86
TOM1L1-220ENST00000575333 NBPF6Q5VWK0 638 aa9.7□□□□□ -0.86
TOM1L1-220ENST00000575333 CCDC91Q7Z6B0 441 aa9.7□□□□□ -0.86
TOM1L1-220ENST00000575333 NBPF5PQ86XG9 351 aaPredicted RBP9.7□□□□□ -0.86
TOM1L1-220ENST00000575333 NBPF4Q96M43 638 aa9.7□□□□□ -0.86
TOM1L1-220ENST00000575333 SPTLC3Q9NUV7 552 aa9.7□□□□□ -0.86
TOM1L1-220ENST00000575333 UGGT2Q9NYU1 1516 aa9.7□□□□□ -0.86
TOM1L1-220ENST00000575333 TIAM1Q13009 1591 aa9.69□□□□□ -0.86
TOM1L1-220ENST00000575333 CASQ1P31415 396 aa9.69□□□□□ -0.86
TOM1L1-220ENST00000575333 RAD51AP2Q09MP3 1159 aa9.69□□□□□ -0.86
TOM1L1-220ENST00000575333 CTNNA3Q9UI47 895 aa9.69□□□□□ -0.86
TOM1L1-220ENST00000575333 CARMIL2Q6F5E8 1435 aa9.69□□□□□ -0.86
TOM1L1-220ENST00000575333 CCDC18Q5T9S5 1454 aa9.69□□□□□ -0.86
TOM1L1-220ENST00000575333 TDO2P48775 406 aa9.68□□□□□ -0.86
TOM1L1-220ENST00000575333 OS9Q13438 667 aaPredicted RBP9.68□□□□□ -0.86
TOM1L1-220ENST00000575333 SMC5Q8IY18 1101 aa9.68□□□□□ -0.86
TOM1L1-220ENST00000575333 GPATCH11Q8N954 259 aa9.68□□□□□ -0.86
TOM1L1-220ENST00000575333 YEATS2Q9ULM3 1422 aa9.68□□□□□ -0.86
TOM1L1-220ENST00000575333 CASC1Q6TDU7 716 aa9.68□□□□□ -0.86
TOM1L1-220ENST00000575333 DISP1Q96F81 1524 aa9.67□□□□□ -0.86
TOM1L1-220ENST00000575333 G3V3G9 751 aa9.67□□□□□ -0.86
TOM1L1-220ENST00000575333 MAFGO15525 162 aa9.67□□□□□ -0.86
TOM1L1-220ENST00000575333 IGSF3O75054 1194 aa9.67□□□□□ -0.86
TOM1L1-220ENST00000575333 CYP2C19P33261 490 aa9.67□□□□□ -0.86
TOM1L1-220ENST00000575333 SEMA3FQ13275 785 aa9.67□□□□□ -0.86
TOM1L1-220ENST00000575333 NOM1Q5C9Z4 860 aaKnown RBP9.67□□□□□ -0.86
TOM1L1-220ENST00000575333 OTUD6BQ8N6M0 293 aa9.67□□□□□ -0.86
TOM1L1-220ENST00000575333 KCNV2Q8TDN2 545 aa9.67□□□□□ -0.86
TOM1L1-220ENST00000575333 TNPO1Q92973 898 aaKnown RBP9.67□□□□□ -0.86
TOM1L1-220ENST00000575333 SNX21Q969T3 373 aa9.67□□□□□ -0.86
TOM1L1-220ENST00000575333 L3MBTL3Q96JM7 780 aaPredicted RBP9.67□□□□□ -0.86
TOM1L1-220ENST00000575333 CWC15Q9P013 229 aaKnown RBP9.67□□□□□ -0.86
TOM1L1-220ENST00000575333 KIF7Q2M1P5 1343 aa9.67□□□□□ -0.86
TOM1L1-220ENST00000575333 PPP1R12AO14974 1030 aaPredicted RBP9.66□□□□□ -0.86
TOM1L1-220ENST00000575333 NOLC1Q14978 699 aaKnown RBP eCLIP9.66□□□□□ -0.86
TOM1L1-220ENST00000575333 SKAP1Q86WV1 359 aa9.66□□□□□ -0.86
TOM1L1-220ENST00000575333 KIAA0556O60303 1618 aa9.66□□□□□ -0.86
TOM1L1-220ENST00000575333 SPATA31E1Q6ZUB1 1445 aa9.66□□□□□ -0.86
TOM1L1-220ENST00000575333 TXLNBQ8N3L3 684 aa9.66□□□□□ -0.86
TOM1L1-220ENST00000575333 DDX27Q96GQ7 796 aaKnown RBP9.66□□□□□ -0.86
TOM1L1-220ENST00000575333 DEF6Q9H4E7 631 aa9.66□□□□□ -0.86
TOM1L1-220ENST00000575333 IRF6O14896 467 aa9.65□□□□□ -0.86
TOM1L1-220ENST00000575333 TPM3P06753 285 aa9.65□□□□□ -0.86
TOM1L1-220ENST00000575333 LIG1P18858 919 aa9.65□□□□□ -0.86
TOM1L1-220ENST00000575333 ANAPC15P60006 121 aa9.65□□□□□ -0.86
TOM1L1-220ENST00000575333 MFSD10Q14728 455 aa9.65□□□□□ -0.86
TOM1L1-220ENST00000575333 ZBTB9Q96C00 473 aa9.65□□□□□ -0.86
TOM1L1-220ENST00000575333 FAM210AQ96ND0 272 aa9.65□□□□□ -0.86
TOM1L1-220ENST00000575333 GPHNQ9NQX3 736 aaPredicted RBP9.65□□□□□ -0.86
TOM1L1-220ENST00000575333 MYBBP1AQ9BQG0 1328 aaKnown RBP9.65□□□□□ -0.87
TOM1L1-220ENST00000575333 KIF15Q9NS87 1388 aa9.65□□□□□ -0.87
TOM1L1-220ENST00000575333 A0A1B0GUL7 405 aa9.64□□□□□ -0.87
TOM1L1-220ENST00000575333 SWT1Q5T5J6 900 aaKnown RBP9.64□□□□□ -0.87
TOM1L1-220ENST00000575333 TMEM92Q6UXU6 159 aa9.64□□□□□ -0.87
TOM1L1-220ENST00000575333 RNF217Q8TC41 542 aa9.64□□□□□ -0.87
TOM1L1-220ENST00000575333 TACO1Q9BSH4 297 aaKnown RBP9.64□□□□□ -0.87
TOM1L1-220ENST00000575333 DDX49Q9Y6V7 483 aaKnown RBP9.64□□□□□ -0.87
TOM1L1-220ENST00000575333 HFM1A2PYH4 1435 aa9.64□□□□□ -0.87
TOM1L1-220ENST00000575333 PTPRGP23470 1445 aa9.64□□□□□ -0.87
TOM1L1-220ENST00000575333 HECW1Q76N89 1606 aa9.64□□□□□ -0.87
TOM1L1-220ENST00000575333 GSCP56915 257 aaPredicted RBP9.63□□□□□ -0.87
TOM1L1-220ENST00000575333 CC2D2BQ6DHV5 1058 aa9.63□□□□□ -0.87
TOM1L1-220ENST00000575333 KIF18AQ8NI77 898 aa9.63□□□□□ -0.87
TOM1L1-220ENST00000575333 CXorf56Q9H5V9 222 aa9.63□□□□□ -0.87
TOM1L1-220ENST00000575333 FAM53CQ9NYF3 392 aa9.63□□□□□ -0.87
TOM1L1-220ENST00000575333 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP9.63□□□□□ -0.87
TOM1L1-220ENST00000575333 RTEL1-TNFRSF6BF6WH68 1400 aa9.63□□□□□ -0.87
TOM1L1-220ENST00000575333 SAMD9Q5K651 1589 aa9.63□□□□□ -0.87
TOM1L1-220ENST00000575333 HNRNPH2P55795 449 aaKnown RBP9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms