RNA–Protein interactions for RNA: ENST00000573126.1

RPAIN-212, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 2,728 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-212ENST00000573126 C22orf23Q9BZE7 217 aa14.16□□□□□ -0.14
RPAIN-212ENST00000573126 SETD1AO15047 1707 aaKnown RBP14.16□□□□□ -0.14
RPAIN-212ENST00000573126 DCTN1Q14203 1278 aa14.16□□□□□ -0.14
RPAIN-212ENST00000573126 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.16□□□□□ -0.14
RPAIN-212ENST00000573126 MAP2P11137 1827 aaKnown RBP14.16□□□□□ -0.14
RPAIN-212ENST00000573126 REREQ9P2R6 1566 aa14.15□□□□□ -0.14
RPAIN-212ENST00000573126 NUTM2FA1L443 756 aa14.15□□□□□ -0.14
RPAIN-212ENST00000573126 GNAI1P63096 354 aa14.15□□□□□ -0.14
RPAIN-212ENST00000573126 ANTXR1Q9H6X2 564 aa14.15□□□□□ -0.14
RPAIN-212ENST00000573126 BRPF3Q9ULD4 1205 aa14.15□□□□□ -0.14
RPAIN-212ENST00000573126 NUCB1Q02818 461 aa14.15□□□□□ -0.14
RPAIN-212ENST00000573126 CALD1Q05682 793 aaKnown RBP14.15□□□□□ -0.14
RPAIN-212ENST00000573126 MRPL50Q8N5N7 158 aaKnown RBP14.15□□□□□ -0.14
RPAIN-212ENST00000573126 IFT57Q9NWB7 429 aa14.15□□□□□ -0.14
RPAIN-212ENST00000573126 CPS1P31327 1500 aa14.15□□□□□ -0.15
RPAIN-212ENST00000573126 ZNF428Q96B54 188 aa14.14□□□□□ -0.15
RPAIN-212ENST00000573126 NRXN3Q9Y4C0 1643 aa14.14□□□□□ -0.15
RPAIN-212ENST00000573126 ZBTB7BO15156 539 aaPredicted RBP14.14□□□□□ -0.15
RPAIN-212ENST00000573126 TWISTNBQ3B726 338 aaPredicted RBP14.14□□□□□ -0.15
RPAIN-212ENST00000573126 CDK12Q9NYV4 1490 aaPredicted RBP14.14□□□□□ -0.15
RPAIN-212ENST00000573126 PRR36Q9H6K5 1346 aa14.14□□□□□ -0.15
RPAIN-212ENST00000573126 CHD1LQ86WJ1 897 aa14.14□□□□□ -0.15
RPAIN-212ENST00000573126 C8orf58Q8NAV2 365 aa14.14□□□□□ -0.15
RPAIN-212ENST00000573126 ZNF853P0CG23 659 aa14.13□□□□□ -0.15
RPAIN-212ENST00000573126 BRPF1P55201 1214 aaPredicted RBP14.13□□□□□ -0.15
RPAIN-212ENST00000573126 AATKQ6ZMQ8 1374 aa14.13□□□□□ -0.15
RPAIN-212ENST00000573126 ANKRD45Q5TZF3 282 aa14.12□□□□□ -0.15
RPAIN-212ENST00000573126 AEBP1Q8IUX7 1158 aa14.12□□□□□ -0.15
RPAIN-212ENST00000573126 CFAP44Q96MT7 982 aa14.12□□□□□ -0.15
RPAIN-212ENST00000573126 SOX12O15370 315 aa14.11□□□□□ -0.15
RPAIN-212ENST00000573126 ARHGAP45Q92619 1136 aa14.11□□□□□ -0.15
RPAIN-212ENST00000573126 ROBO2Q9HCK4 1378 aa14.1□□□□□ -0.15
RPAIN-212ENST00000573126 LMOD3Q0VAK6 560 aa14.1□□□□□ -0.15
RPAIN-212ENST00000573126 HDGFP51858 240 aaKnown RBP14.1□□□□□ -0.15
RPAIN-212ENST00000573126 SULT6B1Q6IMI4 303 aa14.1□□□□□ -0.15
RPAIN-212ENST00000573126 PTCH1Q13635 1447 aa14.1□□□□□ -0.15
RPAIN-212ENST00000573126 SIRT2Q8IXJ6 389 aa14.09□□□□□ -0.15
RPAIN-212ENST00000573126 KRT24Q2M2I5 525 aa14.09□□□□□ -0.15
RPAIN-212ENST00000573126 ZNF692Q9BU19 519 aaPredicted RBP14.09□□□□□ -0.15
RPAIN-212ENST00000573126 ABCC4O15439 1325 aa14.09□□□□□ -0.15
RPAIN-212ENST00000573126 EIF4A2Q14240 407 aaKnown RBP14.08□□□□□ -0.15
RPAIN-212ENST00000573126 TNRQ92752 1358 aa14.08□□□□□ -0.15
RPAIN-212ENST00000573126 TECPR2O15040 1411 aa14.08□□□□□ -0.16
RPAIN-212ENST00000573126 PIK3R4Q99570 1358 aa14.08□□□□□ -0.16
RPAIN-212ENST00000573126 TMEM2Q9UHN6 1383 aa14.07□□□□□ -0.16
RPAIN-212ENST00000573126 ACEP12821 1306 aa14.07□□□□□ -0.16
RPAIN-212ENST00000573126 GCC1Q96CN9 775 aa14.07□□□□□ -0.16
RPAIN-212ENST00000573126 SIRT1Q96EB6 747 aa14.07□□□□□ -0.16
RPAIN-212ENST00000573126 TTC21BQ7Z4L5 1316 aa14.07□□□□□ -0.16
RPAIN-212ENST00000573126 BMP2KLQ5H9B9 411 aa14.06□□□□□ -0.16
RPAIN-212ENST00000573126 MCM10Q7L590 875 aa14.06□□□□□ -0.16
RPAIN-212ENST00000573126 CHMP4BQ9H444 224 aaKnown RBP14.06□□□□□ -0.16
RPAIN-212ENST00000573126 HSP90AB2PQ58FF8 381 aa14.06□□□□□ -0.16
RPAIN-212ENST00000573126 HSCBQ8IWL3 235 aa14.06□□□□□ -0.16
RPAIN-212ENST00000573126 SLC26A8Q96RN1 970 aa14.06□□□□□ -0.16
RPAIN-212ENST00000573126 LTKP29376 864 aa14.05□□□□□ -0.16
RPAIN-212ENST00000573126 API5Q9BZZ5 524 aaKnown RBP14.05□□□□□ -0.16
RPAIN-212ENST00000573126 MON2Q7Z3U7 1717 aa14.04□□□□□ -0.16
RPAIN-212ENST00000573126 ADAMTS13Q76LX8 1427 aa14.04□□□□□ -0.16
RPAIN-212ENST00000573126 RBM25P49756 843 aaKnown RBP14.04□□□□□ -0.16
RPAIN-212ENST00000573126 PLPPR3Q6T4P5 718 aa14.04□□□□□ -0.16
RPAIN-212ENST00000573126 C3P01024 1663 aa14.04□□□□□ -0.16
RPAIN-212ENST00000573126 DLG5Q8TDM6 1919 aa14.04□□□□□ -0.16
RPAIN-212ENST00000573126 CEBPAP49715 358 aaPredicted RBP14.03□□□□□ -0.16
RPAIN-212ENST00000573126 TBC1D9Q6ZT07 1266 aa14.02□□□□□ -0.16
RPAIN-212ENST00000573126 CHMP5Q9NZZ3 219 aa14.02□□□□□ -0.16
RPAIN-212ENST00000573126 ARXQ96QS3 562 aa14.02□□□□□ -0.17
RPAIN-212ENST00000573126 MIS18AQ9NYP9 233 aa14.01□□□□□ -0.17
RPAIN-212ENST00000573126 KNDC1Q76NI1 1749 aa14.01□□□□□ -0.17
RPAIN-212ENST00000573126 MCM4P33991 863 aa14.01□□□□□ -0.17
RPAIN-212ENST00000573126 OVOS2A0A0J9YW53 1432 aa14.01□□□□□ -0.17
RPAIN-212ENST00000573126 OVOS2Q6IE36 1432 aa14.01□□□□□ -0.17
RPAIN-212ENST00000573126 ITSN1Q15811 1721 aa14.01□□□□□ -0.17
RPAIN-212ENST00000573126 CHL1O00533 1208 aa14□□□□□ -0.17
RPAIN-212ENST00000573126 AEBP2Q6ZN18 517 aaPredicted RBP14□□□□□ -0.17
RPAIN-212ENST00000573126 USP6P35125 1406 aa14□□□□□ -0.17
RPAIN-212ENST00000573126 AKAP12Q02952 1782 aa14□□□□□ -0.17
RPAIN-212ENST00000573126 PLEKHG3A1L390 1219 aa14□□□□□ -0.17
RPAIN-212ENST00000573126 FOXO3O43524 673 aa14□□□□□ -0.17
RPAIN-212ENST00000573126 GZF1Q9H116 711 aaPredicted RBP14□□□□□ -0.17
RPAIN-212ENST00000573126 KIF2CQ99661 725 aa13.99□□□□□ -0.17
RPAIN-212ENST00000573126 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.99□□□□□ -0.17
RPAIN-212ENST00000573126 APBB1O00213 710 aa13.99□□□□□ -0.17
RPAIN-212ENST00000573126 CD2BP2O95400 341 aaKnown RBP13.99□□□□□ -0.17
RPAIN-212ENST00000573126 GSPT1P15170 499 aaKnown RBP13.99□□□□□ -0.17
RPAIN-212ENST00000573126 INTS3Q68E01 1043 aaKnown RBP13.99□□□□□ -0.17
RPAIN-212ENST00000573126 C16orf71Q8IYS4 520 aaPredicted RBP13.99□□□□□ -0.17
RPAIN-212ENST00000573126 MAP3K19Q56UN5 1328 aa13.98□□□□□ -0.17
RPAIN-212ENST00000573126 UBR1Q8IWV7 1749 aa13.98□□□□□ -0.17
RPAIN-212ENST00000573126 RBM42Q9BTD8 480 aaKnown RBP13.98□□□□□ -0.17
RPAIN-212ENST00000573126 PLEKHG1Q9ULL1 1385 aa13.97□□□□□ -0.17
RPAIN-212ENST00000573126 RGS12O14924 1447 aa13.97□□□□□ -0.17
RPAIN-212ENST00000573126 PTPRUQ92729 1446 aa13.97□□□□□ -0.17
RPAIN-212ENST00000573126 NRKQ7Z2Y5 1582 aa13.97□□□□□ -0.17
RPAIN-212ENST00000573126 HSP90AB1P08238 724 aaKnown RBP13.97□□□□□ -0.17
RPAIN-212ENST00000573126 PLEKHM2Q8IWE5 1019 aa13.97□□□□□ -0.17
RPAIN-212ENST00000573126 SNX21Q969T3 373 aa13.97□□□□□ -0.17
RPAIN-212ENST00000573126 DCTPP1Q9H773 170 aa13.97□□□□□ -0.17
RPAIN-212ENST00000573126 FOXD4L1Q9NU39 408 aa13.97□□□□□ -0.17
RPAIN-212ENST00000573126 AMOTL2Q9Y2J4 779 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms