RNA–Protein interactions for RNA: ENST00000572844.1

POLR2A-201, Transcript of RNA polymerase II subunit A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene POLR2A, Length 2,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2A-201ENST00000572844 C8orf34Q49A92 452 aa20.87■□□□□ 0.93
POLR2A-201ENST00000572844 SSH1Q8WYL5 1049 aa20.87■□□□□ 0.93
POLR2A-201ENST00000572844 TNNQ9UQP3 1299 aa20.87■□□□□ 0.93
POLR2A-201ENST00000572844 PHACTR3Q96KR7 559 aa20.86■□□□□ 0.93
POLR2A-201ENST00000572844 AMOTL2Q9Y2J4 779 aa20.86■□□□□ 0.93
POLR2A-201ENST00000572844 USP31Q70CQ4 1352 aa20.86■□□□□ 0.93
POLR2A-201ENST00000572844 LMOD3Q0VAK6 560 aa20.85■□□□□ 0.93
POLR2A-201ENST00000572844 SLC26A8Q96RN1 970 aa20.85■□□□□ 0.93
POLR2A-201ENST00000572844 KIF16BQ96L93 1317 aa20.85■□□□□ 0.93
POLR2A-201ENST00000572844 HMOX1P09601 288 aa20.84■□□□□ 0.93
POLR2A-201ENST00000572844 FTSJ3Q8IY81 847 aaKnown RBP20.84■□□□□ 0.93
POLR2A-201ENST00000572844 RWDD1Q9H446 243 aaPredicted RBP20.84■□□□□ 0.93
POLR2A-201ENST00000572844 PCDHB15Q9Y5E8 787 aa20.84■□□□□ 0.93
POLR2A-201ENST00000572844 PIK3R4Q99570 1358 aa20.84■□□□□ 0.93
POLR2A-201ENST00000572844 RGPD1P0DJD0 1748 aa20.84■□□□□ 0.93
POLR2A-201ENST00000572844 TTC21AQ8NDW8 1320 aa20.84■□□□□ 0.93
POLR2A-201ENST00000572844 IPO8O15397 1037 aaKnown RBP20.84■□□□□ 0.93
POLR2A-201ENST00000572844 ATF7IPQ6VMQ6 1270 aa20.84■□□□□ 0.93
POLR2A-201ENST00000572844 NPM2Q86SE8 214 aaKnown RBP20.84■□□□□ 0.93
POLR2A-201ENST00000572844 DDRGK1Q96HY6 314 aa20.84■□□□□ 0.93
POLR2A-201ENST00000572844 IFT57Q9NWB7 429 aa20.84■□□□□ 0.93
POLR2A-201ENST00000572844 RGPD8O14715 1765 aaPredicted RBP20.83■□□□□ 0.93
POLR2A-201ENST00000572844 ZNF853P0CG23 659 aa20.82■□□□□ 0.92
POLR2A-201ENST00000572844 TRIM27P14373 513 aa20.82■□□□□ 0.92
POLR2A-201ENST00000572844 RGS3P49796 1198 aa20.82■□□□□ 0.92
POLR2A-201ENST00000572844 GNAI1P63096 354 aa20.82■□□□□ 0.92
POLR2A-201ENST00000572844 RRS1Q15050 365 aaKnown RBP20.82■□□□□ 0.92
POLR2A-201ENST00000572844 DDX19BQ9UMR2 479 aa20.82■□□□□ 0.92
POLR2A-201ENST00000572844 CEP170BQ9Y4F5 1589 aaPredicted RBP20.82■□□□□ 0.92
POLR2A-201ENST00000572844 PEAK1Q9H792 1746 aa20.82■□□□□ 0.92
POLR2A-201ENST00000572844 FMN2Q9NZ56 1722 aa20.82■□□□□ 0.92
POLR2A-201ENST00000572844 ANKARQ7Z5J8 1434 aa20.81■□□□□ 0.92
POLR2A-201ENST00000572844 NOB1Q9ULX3 412 aaKnown RBP20.8■□□□□ 0.92
POLR2A-201ENST00000572844 USP54Q70EL1 1684 aa20.79■□□□□ 0.92
POLR2A-201ENST00000572844 ZNF142P52746 1687 aaPredicted RBP20.78■□□□□ 0.92
POLR2A-201ENST00000572844 HDAC1Q13547 482 aaPredicted RBP20.77■□□□□ 0.92
POLR2A-201ENST00000572844 EIF4A2Q14240 407 aaKnown RBP20.77■□□□□ 0.92
POLR2A-201ENST00000572844 ARHGAP45Q92619 1136 aa20.77■□□□□ 0.92
POLR2A-201ENST00000572844 VAMP4O75379 141 aa20.76■□□□□ 0.91
POLR2A-201ENST00000572844 CFAP44Q96MT7 982 aa20.76■□□□□ 0.91
POLR2A-201ENST00000572844 CHD2O14647 1828 aaKnown RBP20.75■□□□□ 0.91
POLR2A-201ENST00000572844 PIK3C2AO00443 1686 aa20.74■□□□□ 0.91
POLR2A-201ENST00000572844 PDZRN3Q9UPQ7 1066 aa20.74■□□□□ 0.91
POLR2A-201ENST00000572844 MBIPQ9NS73 344 aa20.73■□□□□ 0.91
POLR2A-201ENST00000572844 ITPRIPQ8IWB1 547 aa20.73■□□□□ 0.91
POLR2A-201ENST00000572844 MRPL50Q8N5N7 158 aaKnown RBP20.73■□□□□ 0.91
POLR2A-201ENST00000572844 LAS1LQ9Y4W2 734 aaKnown RBP20.73■□□□□ 0.91
POLR2A-201ENST00000572844 ARHGEF10O15013 1369 aa20.72■□□□□ 0.91
POLR2A-201ENST00000572844 NUTM2FA1L443 756 aa20.72■□□□□ 0.91
POLR2A-201ENST00000572844 TMEM57Q8N5G2 664 aa20.72■□□□□ 0.91
POLR2A-201ENST00000572844 THUMPD2Q9BTF0 503 aaKnown RBP20.72■□□□□ 0.91
POLR2A-201ENST00000572844 CHMP4BQ9H444 224 aaKnown RBP20.72■□□□□ 0.91
POLR2A-201ENST00000572844 ZBTB40Q9NUA8 1239 aa20.72■□□□□ 0.91
POLR2A-201ENST00000572844 SBNO1A3KN83 1393 aa20.72■□□□□ 0.91
POLR2A-201ENST00000572844 PLPPR3Q6T4P5 718 aa20.71■□□□□ 0.91
POLR2A-201ENST00000572844 MARF1Q9Y4F3 1742 aaKnown RBP20.71■□□□□ 0.91
POLR2A-201ENST00000572844 SULT6B1Q6IMI4 303 aa20.71■□□□□ 0.91
POLR2A-201ENST00000572844 FLT4P35916 1363 aa20.69■□□□□ 0.9
POLR2A-201ENST00000572844 KIF24Q5T7B8 1368 aa20.69■□□□□ 0.9
POLR2A-201ENST00000572844 NGDNQ8NEJ9 315 aaKnown RBP20.69■□□□□ 0.9
POLR2A-201ENST00000572844 ADAMTSL3P82987 1691 aa20.69■□□□□ 0.9
POLR2A-201ENST00000572844 SETD1BQ9UPS6 1966 aaKnown RBP20.69■□□□□ 0.9
POLR2A-201ENST00000572844 MAP3K19Q56UN5 1328 aa20.68■□□□□ 0.9
POLR2A-201ENST00000572844 KCNA6P17658 529 aa20.68■□□□□ 0.9
POLR2A-201ENST00000572844 TWISTNBQ3B726 338 aaPredicted RBP20.68■□□□□ 0.9
POLR2A-201ENST00000572844 AEBP1Q8IUX7 1158 aa20.68■□□□□ 0.9
POLR2A-201ENST00000572844 SMC5Q8IY18 1101 aa20.68■□□□□ 0.9
POLR2A-201ENST00000572844 HAP1P54257 671 aaPredicted RBP20.67■□□□□ 0.9
POLR2A-201ENST00000572844 HSP90AB2PQ58FF8 381 aa20.67■□□□□ 0.9
POLR2A-201ENST00000572844 TSPYL6Q8N831 410 aa20.67■□□□□ 0.9
POLR2A-201ENST00000572844 KDRP35968 1356 aa20.66■□□□□ 0.9
POLR2A-201ENST00000572844 ABCC4O15439 1325 aa20.65■□□□□ 0.9
POLR2A-201ENST00000572844 KIAA0232Q92628 1395 aa20.65■□□□□ 0.9
POLR2A-201ENST00000572844 FAM83GA6ND36 823 aa20.65■□□□□ 0.9
POLR2A-201ENST00000572844 CHL1O00533 1208 aa20.64■□□□□ 0.89
POLR2A-201ENST00000572844 USP19O94966 1318 aa20.64■□□□□ 0.89
POLR2A-201ENST00000572844 ANKLE2Q86XL3 938 aa20.63■□□□□ 0.89
POLR2A-201ENST00000572844 C8orf58Q8NAV2 365 aa20.63■□□□□ 0.89
POLR2A-201ENST00000572844 API5Q9BZZ5 524 aaKnown RBP20.63■□□□□ 0.89
POLR2A-201ENST00000572844 ZBTB7BO15156 539 aaPredicted RBP20.62■□□□□ 0.89
POLR2A-201ENST00000572844 IGSF1Q8N6C5 1336 aa20.62■□□□□ 0.89
POLR2A-201ENST00000572844 DCTN1Q14203 1278 aa20.61■□□□□ 0.89
POLR2A-201ENST00000572844 CRB1P82279 1406 aa20.61■□□□□ 0.89
POLR2A-201ENST00000572844 AMPHP49418 695 aa20.58■□□□□ 0.89
POLR2A-201ENST00000572844 NLRP6P59044 892 aa20.58■□□□□ 0.88
POLR2A-201ENST00000572844 DAXXQ9UER7 740 aaPredicted RBP20.58■□□□□ 0.88
POLR2A-201ENST00000572844 LRRC37A3O60309 1634 aa20.58■□□□□ 0.88
POLR2A-201ENST00000572844 ELL2O00472 640 aaPredicted RBP20.57■□□□□ 0.88
POLR2A-201ENST00000572844 HTATSF1O43719 755 aaKnown RBP20.57■□□□□ 0.88
POLR2A-201ENST00000572844 NUCB1Q02818 461 aa20.57■□□□□ 0.88
POLR2A-201ENST00000572844 GAS2L2Q8NHY3 880 aa20.57■□□□□ 0.88
POLR2A-201ENST00000572844 USP35Q9P2H5 1018 aa20.57■□□□□ 0.88
POLR2A-201ENST00000572844 RTL1A6NKG5 1358 aa20.56■□□□□ 0.88
POLR2A-201ENST00000572844 SEC24BO95487 1268 aa20.56■□□□□ 0.88
POLR2A-201ENST00000572844 NBR1Q14596 966 aa20.56■□□□□ 0.88
POLR2A-201ENST00000572844 EYA1Q99502 592 aa20.56■□□□□ 0.88
POLR2A-201ENST00000572844 NWD1Q149M9 1564 aa20.56■□□□□ 0.88
POLR2A-201ENST00000572844 ADGRL3Q9HAR2 1447 aa20.56■□□□□ 0.88
POLR2A-201ENST00000572844 GCC1Q96CN9 775 aa20.55■□□□□ 0.88
POLR2A-201ENST00000572844 LTN1O94822 1766 aa20.55■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms