RNA–Protein interactions for RNA: ENST00000572824.1

NPLOC4-210, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4

Gene NPLOC4, Length 559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-210ENST00000572824 GLI3P10071 1580 aa13.66□□□□□ -0.22
NPLOC4-210ENST00000572824 ATRNO75882 1429 aa13.66□□□□□ -0.22
NPLOC4-210ENST00000572824 POTEFA5A3E0 1075 aa13.66□□□□□ -0.22
NPLOC4-210ENST00000572824 NPHP3Q7Z494 1330 aa13.65□□□□□ -0.22
NPLOC4-210ENST00000572824 DLC1Q96QB1 1528 aa13.65□□□□□ -0.22
NPLOC4-210ENST00000572824 MICALL2Q8IY33 904 aa13.65□□□□□ -0.22
NPLOC4-210ENST00000572824 PRAM1Q96QH2 718 aa13.65□□□□□ -0.22
NPLOC4-210ENST00000572824 HIRIP3Q9BW71 556 aaPredicted RBP13.65□□□□□ -0.22
NPLOC4-210ENST00000572824 METRNQ9UJH8 293 aa13.65□□□□□ -0.22
NPLOC4-210ENST00000572824 USP21Q9UK80 565 aa13.65□□□□□ -0.22
NPLOC4-210ENST00000572824 CRYBG1Q9Y4K1 1723 aa13.64□□□□□ -0.23
NPLOC4-210ENST00000572824 DHX57Q6P158 1386 aaKnown RBP13.64□□□□□ -0.23
NPLOC4-210ENST00000572824 WDR70Q9NW82 654 aa13.64□□□□□ -0.23
NPLOC4-210ENST00000572824 ALS2Q96Q42 1657 aa13.63□□□□□ -0.23
NPLOC4-210ENST00000572824 RBM6P78332 1123 aaKnown RBP13.63□□□□□ -0.23
NPLOC4-210ENST00000572824 CABLES1Q8TDN4 633 aa13.63□□□□□ -0.23
NPLOC4-210ENST00000572824 BOLA1Q9Y3E2 137 aa13.63□□□□□ -0.23
NPLOC4-210ENST00000572824 TNS3Q68CZ2 1445 aa13.63□□□□□ -0.23
NPLOC4-210ENST00000572824 PRR36Q9H6K5 1346 aa13.63□□□□□ -0.23
NPLOC4-210ENST00000572824 TMEM121BQ9BXQ6 578 aaPredicted RBP13.62□□□□□ -0.23
NPLOC4-210ENST00000572824 CRISPLD2Q9H0B8 497 aa13.62□□□□□ -0.23
NPLOC4-210ENST00000572824 SPATA31A3Q5VYP0 1347 aa13.62□□□□□ -0.23
NPLOC4-210ENST00000572824 NRAPQ86VF7 1730 aa13.61□□□□□ -0.23
NPLOC4-210ENST00000572824 SLIT2O94813 1529 aa13.61□□□□□ -0.23
NPLOC4-210ENST00000572824 PDE4AP27815 886 aa13.61□□□□□ -0.23
NPLOC4-210ENST00000572824 FNBP4Q8N3X1 1017 aaPredicted RBP13.61□□□□□ -0.23
NPLOC4-210ENST00000572824 PMFBP1Q8TBY8 1022 aa13.61□□□□□ -0.23
NPLOC4-210ENST00000572824 TRAK1Q9UPV9 953 aa13.61□□□□□ -0.23
NPLOC4-210ENST00000572824 MINK1Q8N4C8 1332 aaPredicted RBP13.61□□□□□ -0.23
NPLOC4-210ENST00000572824 KRT28Q7Z3Y7 464 aa13.6□□□□□ -0.23
NPLOC4-210ENST00000572824 DCAF11Q8TEB1 546 aa13.6□□□□□ -0.23
NPLOC4-210ENST00000572824 L3MBTL3Q96JM7 780 aaPredicted RBP13.6□□□□□ -0.23
NPLOC4-210ENST00000572824 RALGAPBQ86X10 1494 aa13.6□□□□□ -0.23
NPLOC4-210ENST00000572824 TOPAZ1Q8N9V7 1692 aa13.59□□□□□ -0.23
NPLOC4-210ENST00000572824 TULP4Q9NRJ4 1543 aa13.59□□□□□ -0.23
NPLOC4-210ENST00000572824 G3V3G9 751 aa13.58□□□□□ -0.24
NPLOC4-210ENST00000572824 LARP6Q9BRS8 491 aaKnown RBP13.58□□□□□ -0.24
NPLOC4-210ENST00000572824 TRPC5Q9UL62 973 aaPredicted RBP13.58□□□□□ -0.24
NPLOC4-210ENST00000572824 NWD2Q9ULI1 1742 aa13.58□□□□□ -0.24
NPLOC4-210ENST00000572824 ATP7BP35670 1465 aa13.57□□□□□ -0.24
NPLOC4-210ENST00000572824 ITSN1Q15811 1721 aa13.56□□□□□ -0.24
NPLOC4-210ENST00000572824 POGKQ9P215 609 aa13.56□□□□□ -0.24
NPLOC4-210ENST00000572824 ANKARQ7Z5J8 1434 aa13.56□□□□□ -0.24
NPLOC4-210ENST00000572824 PHRF1Q9P1Y6 1649 aaKnown RBP13.55□□□□□ -0.24
NPLOC4-210ENST00000572824 MFSD10Q14728 455 aa13.55□□□□□ -0.24
NPLOC4-210ENST00000572824 LMOD2Q6P5Q4 547 aa13.55□□□□□ -0.24
NPLOC4-210ENST00000572824 SIRT1Q96EB6 747 aa13.55□□□□□ -0.24
NPLOC4-210ENST00000572824 SRCAPQ6ZRS2 3230 aa13.53□□□□□ -0.24
NPLOC4-210ENST00000572824 GPHNQ9NQX3 736 aaPredicted RBP13.53□□□□□ -0.24
NPLOC4-210ENST00000572824 SBNO1A3KN83 1393 aa13.53□□□□□ -0.24
NPLOC4-210ENST00000572824 ATAD2Q6PL18 1390 aa13.53□□□□□ -0.24
NPLOC4-210ENST00000572824 KIAA1210Q9ULL0 1709 aa13.53□□□□□ -0.24
NPLOC4-210ENST00000572824 DDX27Q96GQ7 796 aaKnown RBP13.52□□□□□ -0.25
NPLOC4-210ENST00000572824 GJD4Q96KN9 370 aaPredicted RBP13.52□□□□□ -0.25
NPLOC4-210ENST00000572824 COL14A1Q05707 1796 aaKnown RBP13.51□□□□□ -0.25
NPLOC4-210ENST00000572824 QRICH2Q9H0J4 1663 aa13.51□□□□□ -0.25
NPLOC4-210ENST00000572824 ACIN1Q9UKV3 1341 aaKnown RBP13.51□□□□□ -0.25
NPLOC4-210ENST00000572824 NBPF1Q3BBV0 1214 aa13.51□□□□□ -0.25
NPLOC4-210ENST00000572824 UNC5CLQ8IV45 518 aa13.51□□□□□ -0.25
NPLOC4-210ENST00000572824 FAM83GA6ND36 823 aa13.5□□□□□ -0.25
NPLOC4-210ENST00000572824 WASLO00401 505 aaPredicted RBP13.5□□□□□ -0.25
NPLOC4-210ENST00000572824 PSME1Q06323 249 aa13.5□□□□□ -0.25
NPLOC4-210ENST00000572824 KCNV2Q8TDN2 545 aa13.5□□□□□ -0.25
NPLOC4-210ENST00000572824 E2F4Q16254 413 aa13.49□□□□□ -0.25
NPLOC4-210ENST00000572824 ARHGEF10O15013 1369 aa13.48□□□□□ -0.25
NPLOC4-210ENST00000572824 TMC2Q8TDI7 906 aa13.48□□□□□ -0.25
NPLOC4-210ENST00000572824 NRKQ7Z2Y5 1582 aa13.48□□□□□ -0.25
NPLOC4-210ENST00000572824 NUTM2GQ5VZR2 741 aa13.47□□□□□ -0.25
NPLOC4-210ENST00000572824 THSD7AQ9UPZ6 1657 aa13.47□□□□□ -0.25
NPLOC4-210ENST00000572824 TRPM1Q7Z4N2 1603 aa13.46□□□□□ -0.25
NPLOC4-210ENST00000572824 KIF3CO14782 793 aa13.46□□□□□ -0.25
NPLOC4-210ENST00000572824 SEPT12Q8IYM1 358 aa13.46□□□□□ -0.25
NPLOC4-210ENST00000572824 C2orf72A6NCS6 295 aa13.45□□□□□ -0.26
NPLOC4-210ENST00000572824 VPS72Q15906 364 aa13.45□□□□□ -0.26
NPLOC4-210ENST00000572824 PPP1R15BQ5SWA1 713 aa13.45□□□□□ -0.26
NPLOC4-210ENST00000572824 FAM182BQ5T319 152 aa13.45□□□□□ -0.26
NPLOC4-210ENST00000572824 TMEM92Q6UXU6 159 aa13.45□□□□□ -0.26
NPLOC4-210ENST00000572824 DEFB132Q7Z7B7 95 aa13.45□□□□□ -0.26
NPLOC4-210ENST00000572824 NUDT16Q96DE0 195 aaKnown RBP13.45□□□□□ -0.26
NPLOC4-210ENST00000572824 CCDC9Q9Y3X0 531 aaKnown RBP13.45□□□□□ -0.26
NPLOC4-210ENST00000572824 TNS1Q9HBL0 1735 aaKnown RBP13.44□□□□□ -0.26
NPLOC4-210ENST00000572824 HRCP23327 699 aa13.44□□□□□ -0.26
NPLOC4-210ENST00000572824 DSG2Q14126 1118 aa13.44□□□□□ -0.26
NPLOC4-210ENST00000572824 NBR1Q14596 966 aa13.44□□□□□ -0.26
NPLOC4-210ENST00000572824 CHRNA2Q15822 529 aa13.44□□□□□ -0.26
NPLOC4-210ENST00000572824 NGDNQ8NEJ9 315 aaKnown RBP13.44□□□□□ -0.26
NPLOC4-210ENST00000572824 SIN3AQ96ST3 1273 aa13.44□□□□□ -0.26
NPLOC4-210ENST00000572824 CDK19Q9BWU1 502 aa13.44□□□□□ -0.26
NPLOC4-210ENST00000572824 BTG4Q9NY30 223 aa13.44□□□□□ -0.26
NPLOC4-210ENST00000572824 GPRASP1Q5JY77 1395 aa13.44□□□□□ -0.26
NPLOC4-210ENST00000572824 FOXK1P85037 733 aa13.43□□□□□ -0.26
NPLOC4-210ENST00000572824 LMO7Q8WWI1 1683 aa13.43□□□□□ -0.26
NPLOC4-210ENST00000572824 KIAA0232Q92628 1395 aa13.43□□□□□ -0.26
NPLOC4-210ENST00000572824 CAMK2BQ13554 666 aa13.42□□□□□ -0.26
NPLOC4-210ENST00000572824 FAM98CQ17RN3 349 aaKnown RBP13.42□□□□□ -0.26
NPLOC4-210ENST00000572824 EIF3AQ14152 1382 aaKnown RBP13.42□□□□□ -0.26
NPLOC4-210ENST00000572824 PIK3C2AO00443 1686 aa13.41□□□□□ -0.26
NPLOC4-210ENST00000572824 C3orf67Q6ZVT6 689 aa13.41□□□□□ -0.26
NPLOC4-210ENST00000572824 POLR3AO14802 1390 aaPredicted RBP13.41□□□□□ -0.26
NPLOC4-210ENST00000572824 ACEP12821 1306 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 99.7 ms