RNA–Protein interactions for RNA: ENST00000571688.5

LITAF-209, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,632 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-209ENST00000571688 GSPT1P15170 499 aaKnown RBP20.71■□□□□ 0.91
LITAF-209ENST00000571688 PTCH1Q13635 1447 aa20.71■□□□□ 0.91
LITAF-209ENST00000571688 SIRT2Q8IXJ6 389 aa20.71■□□□□ 0.91
LITAF-209ENST00000571688 AFAP1Q8N556 730 aa20.71■□□□□ 0.91
LITAF-209ENST00000571688 PPLO60437 1756 aa20.7■□□□□ 0.9
LITAF-209ENST00000571688 PRPF40AO75400 957 aaKnown RBP20.7■□□□□ 0.9
LITAF-209ENST00000571688 ZNF428Q96B54 188 aa20.7■□□□□ 0.9
LITAF-209ENST00000571688 PODXL2Q9NZ53 605 aa20.7■□□□□ 0.9
LITAF-209ENST00000571688 CFAP44Q96MT7 982 aa20.7■□□□□ 0.9
LITAF-209ENST00000571688 C1orf115Q9H7X2 142 aa20.7■□□□□ 0.9
LITAF-209ENST00000571688 TULP4Q9NRJ4 1543 aa20.69■□□□□ 0.9
LITAF-209ENST00000571688 C14orf93Q9H972 538 aaKnown RBP20.69■□□□□ 0.9
LITAF-209ENST00000571688 TMEM63CQ9P1W3 806 aa20.69■□□□□ 0.9
LITAF-209ENST00000571688 ATP7AQ04656 1500 aa20.69■□□□□ 0.9
LITAF-209ENST00000571688 FANCAO15360 1455 aa20.69■□□□□ 0.9
LITAF-209ENST00000571688 USP26Q9BXU7 913 aa20.68■□□□□ 0.9
LITAF-209ENST00000571688 ZDHHC9Q9Y397 364 aa20.68■□□□□ 0.9
LITAF-209ENST00000571688 ARHGAP45Q92619 1136 aa20.67■□□□□ 0.9
LITAF-209ENST00000571688 ARAP3Q8WWN8 1544 aa20.67■□□□□ 0.9
LITAF-209ENST00000571688 SYCE3A1L190 88 aa20.66■□□□□ 0.9
LITAF-209ENST00000571688 KIF3BO15066 747 aa20.66■□□□□ 0.9
LITAF-209ENST00000571688 PLEKHM2Q8IWE5 1019 aa20.66■□□□□ 0.9
LITAF-209ENST00000571688 CCDC94Q9BW85 323 aaPredicted RBP20.66■□□□□ 0.9
LITAF-209ENST00000571688 ANKRD26Q9UPS8 1709 aa20.66■□□□□ 0.9
LITAF-209ENST00000571688 ZCCHC11Q5TAX3 1644 aaKnown RBP20.65■□□□□ 0.9
LITAF-209ENST00000571688 ZGPATQ8N5A5 531 aaKnown RBP20.65■□□□□ 0.9
LITAF-209ENST00000571688 MRPL50Q8N5N7 158 aaKnown RBP20.65■□□□□ 0.9
LITAF-209ENST00000571688 ARHGEF28Q8N1W1 1705 aaKnown RBP20.65■□□□□ 0.9
LITAF-209ENST00000571688 EVC2Q86UK5 1308 aa20.64■□□□□ 0.9
LITAF-209ENST00000571688 ABCC4O15439 1325 aa20.64■□□□□ 0.89
LITAF-209ENST00000571688 TTC22Q5TAA0 569 aa20.63■□□□□ 0.89
LITAF-209ENST00000571688 UTP14CQ5TAP6 766 aaKnown RBP20.63■□□□□ 0.89
LITAF-209ENST00000571688 NSFL1CQ9UNZ2 370 aaKnown RBP20.63■□□□□ 0.89
LITAF-209ENST00000571688 GLI2P10070 1586 aa20.63■□□□□ 0.89
LITAF-209ENST00000571688 KNDC1Q76NI1 1749 aa20.62■□□□□ 0.89
LITAF-209ENST00000571688 TMEM132EQ6IEE7 984 aa20.62■□□□□ 0.89
LITAF-209ENST00000571688 MYRIPQ8NFW9 859 aa20.62■□□□□ 0.89
LITAF-209ENST00000571688 ARID3AQ99856 593 aa20.62■□□□□ 0.89
LITAF-209ENST00000571688 ST18O60284 1047 aa20.62■□□□□ 0.89
LITAF-209ENST00000571688 MBD3O95983 291 aa20.61■□□□□ 0.89
LITAF-209ENST00000571688 KIAA2012Q0VF49 1180 aa20.61■□□□□ 0.89
LITAF-209ENST00000571688 DMTNQ08495 405 aa20.61■□□□□ 0.89
LITAF-209ENST00000571688 INTS3Q68E01 1043 aaKnown RBP20.61■□□□□ 0.89
LITAF-209ENST00000571688 A0A1W2PP64 1363 aa20.61■□□□□ 0.89
LITAF-209ENST00000571688 VAMP4O75379 141 aa20.6■□□□□ 0.89
LITAF-209ENST00000571688 LMTK2Q8IWU2 1503 aa20.6■□□□□ 0.89
LITAF-209ENST00000571688 CDC42BPGQ6DT37 1551 aa20.6■□□□□ 0.89
LITAF-209ENST00000571688 LRRC7Q96NW7 1537 aa20.6■□□□□ 0.89
LITAF-209ENST00000571688 PRDM10Q9NQV6 1147 aa20.59■□□□□ 0.89
LITAF-209ENST00000571688 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP20.59■□□□□ 0.89
LITAF-209ENST00000571688 CHAMP1Q96JM3 812 aa20.58■□□□□ 0.89
LITAF-209ENST00000571688 GGNBP2Q9H3C7 697 aa20.58■□□□□ 0.89
LITAF-209ENST00000571688 PNPLA6Q8IY17 1366 aa20.58■□□□□ 0.88
LITAF-209ENST00000571688 ERCC6L2Q5T890 1561 aa20.58■□□□□ 0.88
LITAF-209ENST00000571688 RNF214Q8ND24 703 aa20.57■□□□□ 0.88
LITAF-209ENST00000571688 DCTPP1Q9H773 170 aa20.57■□□□□ 0.88
LITAF-209ENST00000571688 YEATS2Q9ULM3 1422 aa20.57■□□□□ 0.88
LITAF-209ENST00000571688 DIAPH1O60610 1272 aaKnown RBP20.57■□□□□ 0.88
LITAF-209ENST00000571688 ZSCAN20P17040 1043 aaPredicted RBP20.57■□□□□ 0.88
LITAF-209ENST00000571688 PRIMPOLQ96LW4 560 aa20.57■□□□□ 0.88
LITAF-209ENST00000571688 CABP2Q9NPB3 220 aa20.57■□□□□ 0.88
LITAF-209ENST00000571688 FAM135BQ49AJ0 1406 aa20.56■□□□□ 0.88
LITAF-209ENST00000571688 TSPY26PQ9H489 355 aa20.56■□□□□ 0.88
LITAF-209ENST00000571688 PTMAP06454 111 aaKnown RBP20.56■□□□□ 0.88
LITAF-209ENST00000571688 GTF2F1P35269 517 aaKnown RBP eCLIP20.56■□□□□ 0.88
LITAF-209ENST00000571688 CHGAP10645 457 aaKnown RBP20.55■□□□□ 0.88
LITAF-209ENST00000571688 ZHX1Q9UKY1 873 aaPredicted RBP20.55■□□□□ 0.88
LITAF-209ENST00000571688 KIF24Q5T7B8 1368 aa20.55■□□□□ 0.88
LITAF-209ENST00000571688 CHD1O14646 1710 aa20.54■□□□□ 0.88
LITAF-209ENST00000571688 FCHSD2O94868 740 aa20.54■□□□□ 0.88
LITAF-209ENST00000571688 ZNF710Q8N1W2 664 aa20.54■□□□□ 0.88
LITAF-209ENST00000571688 TSPYL6Q8N831 410 aa20.54■□□□□ 0.88
LITAF-209ENST00000571688 C16orf71Q8IYS4 520 aaPredicted RBP20.53■□□□□ 0.88
LITAF-209ENST00000571688 PIBF1Q8WXW3 757 aa20.53■□□□□ 0.88
LITAF-209ENST00000571688 SDSP20132 328 aa20.53■□□□□ 0.88
LITAF-209ENST00000571688 HMGN5P82970 282 aaKnown RBP20.53■□□□□ 0.88
LITAF-209ENST00000571688 CAMSAP1Q5T5Y3 1602 aa20.52■□□□□ 0.88
LITAF-209ENST00000571688 ABCA9Q8IUA7 1624 aa20.52■□□□□ 0.88
LITAF-209ENST00000571688 FYB1O15117 783 aa20.52■□□□□ 0.88
LITAF-209ENST00000571688 BRD1O95696 1058 aa20.52■□□□□ 0.88
LITAF-209ENST00000571688 CASC1Q6TDU7 716 aa20.52■□□□□ 0.88
LITAF-209ENST00000571688 RPGRIP1LQ68CZ1 1315 aa20.51■□□□□ 0.87
LITAF-209ENST00000571688 API5Q9BZZ5 524 aaKnown RBP20.51■□□□□ 0.87
LITAF-209ENST00000571688 REC8O95072 547 aa20.51■□□□□ 0.87
LITAF-209ENST00000571688 DNTTIP2Q5QJE6 756 aaKnown RBP20.51■□□□□ 0.87
LITAF-209ENST00000571688 JARID2Q92833 1246 aaPredicted RBP20.5■□□□□ 0.87
LITAF-209ENST00000571688 SYAP1Q96A49 352 aaPredicted RBP20.5■□□□□ 0.87
LITAF-209ENST00000571688 UHRF1BP1LA0JNW5 1464 aa20.5■□□□□ 0.87
LITAF-209ENST00000571688 ZFYVE9O95405 1425 aa20.5■□□□□ 0.87
LITAF-209ENST00000571688 OTUD7AQ8TE49 926 aaPredicted RBP20.5■□□□□ 0.87
LITAF-209ENST00000571688 ATP10DQ9P241 1426 aa20.5■□□□□ 0.87
LITAF-209ENST00000571688 PRKAR2BP31323 418 aa20.49■□□□□ 0.87
LITAF-209ENST00000571688 IFT57Q9NWB7 429 aa20.49■□□□□ 0.87
LITAF-209ENST00000571688 ATAD2Q6PL18 1390 aa20.49■□□□□ 0.87
LITAF-209ENST00000571688 GNAI1P63096 354 aa20.49■□□□□ 0.87
LITAF-209ENST00000571688 FOXD4L5Q5VV16 416 aaPredicted RBP20.49■□□□□ 0.87
LITAF-209ENST00000571688 FOXD4L4Q8WXT5 416 aaPredicted RBP20.49■□□□□ 0.87
LITAF-209ENST00000571688 CD163L1Q9NR16 1453 aa20.48■□□□□ 0.87
LITAF-209ENST00000571688 NOLC1Q14978 699 aaKnown RBP eCLIP20.48■□□□□ 0.871e-6■□□□□ 11
LITAF-209ENST00000571688 UVSSAQ2YD98 709 aa20.48■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms