RNA–Protein interactions for RNA: ENST00000571252.2

PCDHGA4-201, Transcript of protocadherin gamma subfamily A, 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA4, Length 4,778 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA4-201ENST00000571252 C9orf78Q9NZ63 289 aaPredicted RBP13.48□□□□□ -0.25
PCDHGA4-201ENST00000571252 ZFYVE16Q7Z3T8 1539 aa13.48□□□□□ -0.25
PCDHGA4-201ENST00000571252 PTPRTO14522 1441 aa13.48□□□□□ -0.25
PCDHGA4-201ENST00000571252 FAM184AQ8NB25 1140 aa13.48□□□□□ -0.25
PCDHGA4-201ENST00000571252 ERC2O15083 957 aa13.47□□□□□ -0.25
PCDHGA4-201ENST00000571252 SF3A1Q15459 793 aaKnown RBP13.47□□□□□ -0.25
PCDHGA4-201ENST00000571252 FBXO31Q5XUX0 539 aaPredicted RBP13.47□□□□□ -0.25
PCDHGA4-201ENST00000571252 GNAI3P08754 354 aa13.47□□□□□ -0.25
PCDHGA4-201ENST00000571252 IFIT2P09913 472 aaKnown RBP13.47□□□□□ -0.25
PCDHGA4-201ENST00000571252 THUMPD2Q9BTF0 503 aaKnown RBP13.47□□□□□ -0.25
PCDHGA4-201ENST00000571252 RBM10P98175 930 aaKnown RBP13.47□□□□□ -0.25
PCDHGA4-201ENST00000571252 CDK19Q9BWU1 502 aa13.47□□□□□ -0.25
PCDHGA4-201ENST00000571252 GORABQ5T7V8 394 aa13.46□□□□□ -0.25
PCDHGA4-201ENST00000571252 TNPO1Q92973 898 aaKnown RBP13.46□□□□□ -0.25
PCDHGA4-201ENST00000571252 UBTFL1P0CB47 393 aaPredicted RBP13.46□□□□□ -0.25
PCDHGA4-201ENST00000571252 SLC4A2P04920 1241 aa13.45□□□□□ -0.26
PCDHGA4-201ENST00000571252 TSPY26PQ9H489 355 aa13.45□□□□□ -0.26
PCDHGA4-201ENST00000571252 SLC52A1Q9NWF4 448 aa13.45□□□□□ -0.26
PCDHGA4-201ENST00000571252 BICD2Q8TD16 824 aa13.45□□□□□ -0.26
PCDHGA4-201ENST00000571252 CLTCL1P53675 1640 aa13.45□□□□□ -0.26
PCDHGA4-201ENST00000571252 RRP9O43818 475 aaKnown RBP13.45□□□□□ -0.26
PCDHGA4-201ENST00000571252 ZSCAN30Q86W11 494 aa13.45□□□□□ -0.26
PCDHGA4-201ENST00000571252 NPC1L1Q9UHC9 1359 aa13.44□□□□□ -0.26
PCDHGA4-201ENST00000571252 SURF6O75683 361 aaKnown RBP13.44□□□□□ -0.26
PCDHGA4-201ENST00000571252 NFE2L2Q16236 605 aa13.44□□□□□ -0.26
PCDHGA4-201ENST00000571252 SULT6B1Q6IMI4 303 aa13.44□□□□□ -0.26
PCDHGA4-201ENST00000571252 MTERF4Q7Z6M4 381 aaKnown RBP13.44□□□□□ -0.26
PCDHGA4-201ENST00000571252 TNNQ9UQP3 1299 aa13.44□□□□□ -0.26
PCDHGA4-201ENST00000571252 E9PCH4 1651 aa13.44□□□□□ -0.26
PCDHGA4-201ENST00000571252 HSP90AB4PQ58FF6 505 aa13.44□□□□□ -0.26
PCDHGA4-201ENST00000571252 ZNF592Q92610 1267 aa13.44□□□□□ -0.26
PCDHGA4-201ENST00000571252 INSRP06213 1382 aa13.44□□□□□ -0.26
PCDHGA4-201ENST00000571252 ERVK-7P63135 1459 aa13.44□□□□□ -0.26
PCDHGA4-201ENST00000571252 SEC24BO95487 1268 aa13.44□□□□□ -0.26
PCDHGA4-201ENST00000571252 GNAI2P04899 355 aa13.44□□□□□ -0.26
PCDHGA4-201ENST00000571252 ALDH1L2Q3SY69 923 aa13.44□□□□□ -0.26
PCDHGA4-201ENST00000571252 ZNF521Q96K83 1311 aa13.44□□□□□ -0.26
PCDHGA4-201ENST00000571252 ATAD2Q6PL18 1390 aa13.43□□□□□ -0.26
PCDHGA4-201ENST00000571252 ABCC11Q96J66 1382 aa13.43□□□□□ -0.26
PCDHGA4-201ENST00000571252 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.43□□□□□ -0.26
PCDHGA4-201ENST00000571252 CCDC27Q2M243 656 aa13.43□□□□□ -0.26
PCDHGA4-201ENST00000571252 RNF20Q5VTR2 975 aa13.43□□□□□ -0.26
PCDHGA4-201ENST00000571252 SHROOM2Q13796 1616 aa13.43□□□□□ -0.26
PCDHGA4-201ENST00000571252 XRCC6P12956 609 aaKnown RBP eCLIP13.43□□□□□ -0.26
PCDHGA4-201ENST00000571252 SSFA2P28290 1259 aa13.43□□□□□ -0.26
PCDHGA4-201ENST00000571252 RPAP2Q8IXW5 612 aaPredicted RBP13.43□□□□□ -0.26
PCDHGA4-201ENST00000571252 MPNDQ8N594 471 aa13.43□□□□□ -0.26
PCDHGA4-201ENST00000571252 NPATQ14207 1427 aa13.42□□□□□ -0.26
PCDHGA4-201ENST00000571252 FBLN1P23142 703 aa13.42□□□□□ -0.26
PCDHGA4-201ENST00000571252 TAF7LQ5H9L4 462 aa13.42□□□□□ -0.26
PCDHGA4-201ENST00000571252 POLR3AO14802 1390 aaPredicted RBP13.42□□□□□ -0.26
PCDHGA4-201ENST00000571252 FIBPO43427 364 aa13.42□□□□□ -0.26
PCDHGA4-201ENST00000571252 GTF2E1P29083 439 aaPredicted RBP13.42□□□□□ -0.26
PCDHGA4-201ENST00000571252 KDM2BQ8NHM5 1336 aa13.42□□□□□ -0.26
PCDHGA4-201ENST00000571252 MADDQ8WXG6 1647 aa13.42□□□□□ -0.26
PCDHGA4-201ENST00000571252 WAPLQ7Z5K2 1190 aa13.41□□□□□ -0.26
PCDHGA4-201ENST00000571252 RLBP1P12271 317 aa13.41□□□□□ -0.26
PCDHGA4-201ENST00000571252 BMP2KLQ5H9B9 411 aa13.41□□□□□ -0.26
PCDHGA4-201ENST00000571252 PANK2Q9BZ23 570 aa13.41□□□□□ -0.26
PCDHGA4-201ENST00000571252 G3BP1Q13283 466 aaKnown RBP eCLIP13.41□□□□□ -0.26
PCDHGA4-201ENST00000571252 CCDC30Q5VVM6 783 aa13.41□□□□□ -0.26
PCDHGA4-201ENST00000571252 SASS6Q6UVJ0 657 aa13.4□□□□□ -0.26
PCDHGA4-201ENST00000571252 IFT57Q9NWB7 429 aa13.4□□□□□ -0.26
PCDHGA4-201ENST00000571252 SYNMO15061 1565 aa13.4□□□□□ -0.26
PCDHGA4-201ENST00000571252 C1orf141Q5JVX7 400 aa13.4□□□□□ -0.26
PCDHGA4-201ENST00000571252 CNTROBQ8N137 903 aa13.4□□□□□ -0.26
PCDHGA4-201ENST00000571252 NEXNQ0ZGT2 675 aa13.4□□□□□ -0.26
PCDHGA4-201ENST00000571252 HDAC1Q13547 482 aaPredicted RBP13.4□□□□□ -0.26
PCDHGA4-201ENST00000571252 CLASRPQ8N2M8 674 aaKnown RBP13.4□□□□□ -0.26
PCDHGA4-201ENST00000571252 LRRCC1Q9C099 1032 aa13.4□□□□□ -0.26
PCDHGA4-201ENST00000571252 CCT4P50991 539 aaKnown RBP13.4□□□□□ -0.26
PCDHGA4-201ENST00000571252 WDR33Q9C0J8 1336 aaKnown RBP13.39□□□□□ -0.27
PCDHGA4-201ENST00000571252 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.39□□□□□ -0.27
PCDHGA4-201ENST00000571252 HMGN5P82970 282 aaKnown RBP13.39□□□□□ -0.27
PCDHGA4-201ENST00000571252 TBC1D9Q6ZT07 1266 aa13.39□□□□□ -0.27
PCDHGA4-201ENST00000571252 KDM5AP29375 1690 aaKnown RBP13.39□□□□□ -0.27
PCDHGA4-201ENST00000571252 SPHKAPQ2M3C7 1700 aa13.39□□□□□ -0.27
PCDHGA4-201ENST00000571252 LETM1O95202 739 aaPredicted RBP13.39□□□□□ -0.27
PCDHGA4-201ENST00000571252 RRS1Q15050 365 aaKnown RBP13.39□□□□□ -0.27
PCDHGA4-201ENST00000571252 TET3O43151 1660 aa13.39□□□□□ -0.27
PCDHGA4-201ENST00000571252 SYCE3A1L190 88 aa13.39□□□□□ -0.27
PCDHGA4-201ENST00000571252 GAS2L2Q8NHY3 880 aa13.38□□□□□ -0.27
PCDHGA4-201ENST00000571252 PKNOX2Q96KN3 472 aa13.38□□□□□ -0.27
PCDHGA4-201ENST00000571252 TXNDC2Q86VQ3 553 aa13.37□□□□□ -0.27
PCDHGA4-201ENST00000571252 CLASP1Q7Z460 1538 aa13.37□□□□□ -0.27
PCDHGA4-201ENST00000571252 UQCRHLA0A096LP55 91 aa13.37□□□□□ -0.27
PCDHGA4-201ENST00000571252 UQCRHP07919 91 aa13.37□□□□□ -0.27
PCDHGA4-201ENST00000571252 DCTN1Q14203 1278 aa13.37□□□□□ -0.27
PCDHGA4-201ENST00000571252 ZNF771Q7L3S4 317 aaPredicted RBP13.37□□□□□ -0.27
PCDHGA4-201ENST00000571252 TRMT2AQ8IZ69 625 aaKnown RBP13.37□□□□□ -0.27
PCDHGA4-201ENST00000571252 CHMP4CQ96CF2 233 aa13.37□□□□□ -0.27
PCDHGA4-201ENST00000571252 EXOC6BQ9Y2D4 811 aa13.37□□□□□ -0.27
PCDHGA4-201ENST00000571252 LAMC1P11047 1609 aa13.37□□□□□ -0.27
PCDHGA4-201ENST00000571252 ANKRD36BQ8N2N9 1353 aa13.37□□□□□ -0.27
PCDHGA4-201ENST00000571252 FYB1O15117 783 aa13.37□□□□□ -0.27
PCDHGA4-201ENST00000571252 SMARCA5O60264 1052 aaPredicted RBP13.37□□□□□ -0.27
PCDHGA4-201ENST00000571252 CCDC34Q96HJ3 373 aa13.37□□□□□ -0.27
PCDHGA4-201ENST00000571252 CLCN1P35523 988 aa13.36□□□□□ -0.27
PCDHGA4-201ENST00000571252 BAG4O95429 457 aaKnown RBP13.36□□□□□ -0.27
PCDHGA4-201ENST00000571252 DDX58O95786 925 aaKnown RBP13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms