RNA–Protein interactions for RNA: ENST00000570756.5

SMG6-207, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 2,426 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-207ENST00000570756 ZSCAN23Q3MJ62 389 aa19.05■□□□□ 0.64
SMG6-207ENST00000570756 PDLIM2Q96JY6 352 aa19.05■□□□□ 0.64
SMG6-207ENST00000570756 R3HCC1Q9Y3T6 440 aaKnown RBP19.05■□□□□ 0.64
SMG6-207ENST00000570756 MCM5P33992 734 aa19.04■□□□□ 0.64
SMG6-207ENST00000570756 MCTP1Q6DN14 999 aa19.04■□□□□ 0.64
SMG6-207ENST00000570756 RBM42Q9BTD8 480 aaKnown RBP19.04■□□□□ 0.64
SMG6-207ENST00000570756 CAVIN1Q6NZI2 390 aaKnown RBP19.04■□□□□ 0.64
SMG6-207ENST00000570756 EFCAB6Q5THR3 1501 aa19.03■□□□□ 0.64
SMG6-207ENST00000570756 PPIP5K1Q6PFW1 1433 aa19.03■□□□□ 0.64
SMG6-207ENST00000570756 NCLP19338 710 aaKnown RBP19.03■□□□□ 0.64
SMG6-207ENST00000570756 BRPF1P55201 1214 aaPredicted RBP19.03■□□□□ 0.64
SMG6-207ENST00000570756 RBM10P98175 930 aaKnown RBP19.03■□□□□ 0.64
SMG6-207ENST00000570756 FAM13BQ9NYF5 915 aa19.03■□□□□ 0.64
SMG6-207ENST00000570756 EVC2Q86UK5 1308 aa19.02■□□□□ 0.64
SMG6-207ENST00000570756 ADGRB3O60242 1522 aa19.02■□□□□ 0.64
SMG6-207ENST00000570756 C14orf93Q9H972 538 aaKnown RBP19.02■□□□□ 0.63
SMG6-207ENST00000570756 CWC22Q9HCG8 908 aaKnown RBP19.01■□□□□ 0.63
SMG6-207ENST00000570756 ARHGEF40Q8TER5 1519 aa19.01■□□□□ 0.63
SMG6-207ENST00000570756 ADGRB1O14514 1584 aa19.01■□□□□ 0.63
SMG6-207ENST00000570756 LMBRD1Q9NUN5 540 aa19.01■□□□□ 0.63
SMG6-207ENST00000570756 UQCRHLA0A096LP55 91 aa19■□□□□ 0.63
SMG6-207ENST00000570756 UQCRHP07919 91 aa19■□□□□ 0.63
SMG6-207ENST00000570756 ZKSCAN5Q9Y2L8 839 aa19■□□□□ 0.63
SMG6-207ENST00000570756 AK9Q5TCS8 1911 aa19■□□□□ 0.63
SMG6-207ENST00000570756 DYNC1I1O14576 645 aa19■□□□□ 0.63
SMG6-207ENST00000570756 ZBTB7BO15156 539 aaPredicted RBP19■□□□□ 0.63
SMG6-207ENST00000570756 CYP2E1P05181 493 aaPredicted RBP19■□□□□ 0.63
SMG6-207ENST00000570756 RBSNQ9H1K0 784 aa19■□□□□ 0.63
SMG6-207ENST00000570756 MROH1Q8NDA8 1641 aa18.99■□□□□ 0.63
SMG6-207ENST00000570756 COL3A1P02461 1466 aaPredicted RBP18.99■□□□□ 0.63
SMG6-207ENST00000570756 ARHGAP45Q92619 1136 aa18.99■□□□□ 0.63
SMG6-207ENST00000570756 CCDC39Q9UFE4 941 aa18.98■□□□□ 0.63
SMG6-207ENST00000570756 PIK3R4Q99570 1358 aa18.97■□□□□ 0.63
SMG6-207ENST00000570756 PPLO60437 1756 aa18.97■□□□□ 0.63
SMG6-207ENST00000570756 XPCQ01831 940 aaPredicted RBP18.97■□□□□ 0.63
SMG6-207ENST00000570756 PRIM1P49642 420 aaKnown RBP18.96■□□□□ 0.63
SMG6-207ENST00000570756 EIF2AK3Q9NZJ5 1116 aaKnown RBP18.96■□□□□ 0.63
SMG6-207ENST00000570756 PTCH1Q13635 1447 aa18.95■□□□□ 0.62
SMG6-207ENST00000570756 CHGAP10645 457 aaKnown RBP18.95■□□□□ 0.62
SMG6-207ENST00000570756 ST18O60284 1047 aa18.94■□□□□ 0.62
SMG6-207ENST00000570756 SASS6Q6UVJ0 657 aa18.94■□□□□ 0.62
SMG6-207ENST00000570756 PRDM4Q9UKN5 801 aa18.94■□□□□ 0.62
SMG6-207ENST00000570756 TULP4Q9NRJ4 1543 aa18.94■□□□□ 0.62
SMG6-207ENST00000570756 LRSAM1Q6UWE0 723 aa18.94■□□□□ 0.62
SMG6-207ENST00000570756 PRPF40AO75400 957 aaKnown RBP18.93■□□□□ 0.62
SMG6-207ENST00000570756 SMAP1Q8IYB5 467 aaPredicted RBP18.93■□□□□ 0.62
SMG6-207ENST00000570756 C1orf115Q9H7X2 142 aa18.93■□□□□ 0.62
SMG6-207ENST00000570756 LMTK2Q8IWU2 1503 aa18.93■□□□□ 0.62
SMG6-207ENST00000570756 TMEM132EQ6IEE7 984 aa18.93■□□□□ 0.62
SMG6-207ENST00000570756 INTS3Q68E01 1043 aaKnown RBP18.92■□□□□ 0.62
SMG6-207ENST00000570756 RPGRIP1LQ68CZ1 1315 aa18.92■□□□□ 0.62
SMG6-207ENST00000570756 DIAPH1O60610 1272 aaKnown RBP18.92■□□□□ 0.62
SMG6-207ENST00000570756 GSPT1P15170 499 aaKnown RBP18.92■□□□□ 0.62
SMG6-207ENST00000570756 CFAP65Q6ZU64 1925 aaKnown RBP18.92■□□□□ 0.62
SMG6-207ENST00000570756 CASC1Q6TDU7 716 aa18.91■□□□□ 0.62
SMG6-207ENST00000570756 SIRT2Q8IXJ6 389 aa18.91■□□□□ 0.62
SMG6-207ENST00000570756 GPT2Q8TD30 523 aa18.91■□□□□ 0.62
SMG6-207ENST00000570756 USP26Q9BXU7 913 aa18.91■□□□□ 0.62
SMG6-207ENST00000570756 MBD3O95983 291 aa18.91■□□□□ 0.62
SMG6-207ENST00000570756 MRPL50Q8N5N7 158 aaKnown RBP18.91■□□□□ 0.62
SMG6-207ENST00000570756 ANKRD26Q9UPS8 1709 aa18.91■□□□□ 0.62
SMG6-207ENST00000570756 ARHGEF28Q8N1W1 1705 aaKnown RBP18.9■□□□□ 0.62
SMG6-207ENST00000570756 A0A1W2PP64 1363 aa18.9■□□□□ 0.62
SMG6-207ENST00000570756 ABCC4O15439 1325 aa18.9■□□□□ 0.62
SMG6-207ENST00000570756 TTC22Q5TAA0 569 aa18.9■□□□□ 0.62
SMG6-207ENST00000570756 PLEKHM2Q8IWE5 1019 aa18.9■□□□□ 0.62
SMG6-207ENST00000570756 PKP1Q13835 747 aa18.89■□□□□ 0.61
SMG6-207ENST00000570756 GGNBP2Q9H3C7 697 aa18.89■□□□□ 0.61
SMG6-207ENST00000570756 FCHSD2O94868 740 aa18.89■□□□□ 0.61
SMG6-207ENST00000570756 PLPPR3Q6T4P5 718 aa18.89■□□□□ 0.61
SMG6-207ENST00000570756 CABP2Q9NPB3 220 aa18.88■□□□□ 0.61
SMG6-207ENST00000570756 RBM27Q9P2N5 1060 aaKnown RBP18.88■□□□□ 0.61
SMG6-207ENST00000570756 VAMP4O75379 141 aa18.88■□□□□ 0.61
SMG6-207ENST00000570756 SYCE3A1L190 88 aa18.87■□□□□ 0.61
SMG6-207ENST00000570756 API5Q9BZZ5 524 aaKnown RBP18.86■□□□□ 0.61
SMG6-207ENST00000570756 TMEM63CQ9P1W3 806 aa18.86■□□□□ 0.61
SMG6-207ENST00000570756 PNPLA6Q8IY17 1366 aa18.86■□□□□ 0.61
SMG6-207ENST00000570756 KIAA2012Q0VF49 1180 aa18.86■□□□□ 0.61
SMG6-207ENST00000570756 CDC42BPGQ6DT37 1551 aa18.86■□□□□ 0.61
SMG6-207ENST00000570756 KIF24Q5T7B8 1368 aa18.86■□□□□ 0.61
SMG6-207ENST00000570756 DCTPP1Q9H773 170 aa18.85■□□□□ 0.61
SMG6-207ENST00000570756 TERF2IPQ9NYB0 399 aa18.85■□□□□ 0.61
SMG6-207ENST00000570756 ZFYVE9O95405 1425 aa18.85■□□□□ 0.61
SMG6-207ENST00000570756 LRRC7Q96NW7 1537 aa18.85■□□□□ 0.61
SMG6-207ENST00000570756 REC8O95072 547 aa18.85■□□□□ 0.61
SMG6-207ENST00000570756 PTMAP06454 111 aaKnown RBP18.85■□□□□ 0.61
SMG6-207ENST00000570756 ZGPATQ8N5A5 531 aaKnown RBP18.84■□□□□ 0.61
SMG6-207ENST00000570756 GNAI1P63096 354 aa18.84■□□□□ 0.61
SMG6-207ENST00000570756 SYAP1Q96A49 352 aaPredicted RBP18.84■□□□□ 0.61
SMG6-207ENST00000570756 ZDHHC9Q9Y397 364 aa18.84■□□□□ 0.61
SMG6-207ENST00000570756 AGLP35573 1532 aa18.84■□□□□ 0.61
SMG6-207ENST00000570756 FAM135BQ49AJ0 1406 aa18.84■□□□□ 0.61
SMG6-207ENST00000570756 ABCC3O15438 1527 aa18.83■□□□□ 0.61
SMG6-207ENST00000570756 FYB1O15117 783 aa18.83■□□□□ 0.6
SMG6-207ENST00000570756 CCDC94Q9BW85 323 aaPredicted RBP18.83■□□□□ 0.6
SMG6-207ENST00000570756 IFT57Q9NWB7 429 aa18.83■□□□□ 0.6
SMG6-207ENST00000570756 ATAD2Q6PL18 1390 aa18.82■□□□□ 0.6
SMG6-207ENST00000570756 SRPK2P78362 688 aaKnown RBP18.82■□□□□ 0.6
SMG6-207ENST00000570756 PRKAR2BP31323 418 aa18.82■□□□□ 0.6
SMG6-207ENST00000570756 TSPY26PQ9H489 355 aa18.82■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms