RNA–Protein interactions for RNA: ENST00000569288.1

LINC00555-201, long intergenic non-protein coding RNA 555, humanhuman

BASIC

Gene LINC00555, Length 442 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00555-201ENST00000569288 COL14A1Q05707 1796 aaKnown RBP12.53□□□□□ -0.4
LINC00555-201ENST00000569288 NEFMP07197 916 aa12.52□□□□□ -0.41
LINC00555-201ENST00000569288 TRMT2AQ8IZ69 625 aaKnown RBP12.52□□□□□ -0.41
LINC00555-201ENST00000569288 PLEKHF1Q96S99 279 aa12.52□□□□□ -0.41
LINC00555-201ENST00000569288 CPDO75976 1380 aa12.52□□□□□ -0.41
LINC00555-201ENST00000569288 PLCH1Q4KWH8 1693 aa12.51□□□□□ -0.41
LINC00555-201ENST00000569288 LTN1O94822 1766 aa12.51□□□□□ -0.41
LINC00555-201ENST00000569288 U2AF1L5P0DN76 240 aaPredicted RBP12.51□□□□□ -0.41
LINC00555-201ENST00000569288 U2AF1Q01081 240 aaKnown RBP eCLIP12.51□□□□□ -0.41
LINC00555-201ENST00000569288 GOLGA2Q08379 1002 aa12.51□□□□□ -0.41
LINC00555-201ENST00000569288 LMOD2Q6P5Q4 547 aa12.51□□□□□ -0.41
LINC00555-201ENST00000569288 FLT4P35916 1363 aa12.51□□□□□ -0.41
LINC00555-201ENST00000569288 ABCC6O95255 1503 aa12.51□□□□□ -0.41
LINC00555-201ENST00000569288 COL18A1P39060 1754 aa12.51□□□□□ -0.41
LINC00555-201ENST00000569288 IL16Q14005 1332 aa12.5□□□□□ -0.41
LINC00555-201ENST00000569288 PLEKHG2Q9H7P9 1386 aa12.5□□□□□ -0.41
LINC00555-201ENST00000569288 NFAT5O94916 1531 aa12.5□□□□□ -0.41
LINC00555-201ENST00000569288 MAP2P11137 1827 aaKnown RBP12.49□□□□□ -0.41
LINC00555-201ENST00000569288 LMO7Q8WWI1 1683 aa12.49□□□□□ -0.41
LINC00555-201ENST00000569288 SLIT2O94813 1529 aa12.49□□□□□ -0.41
LINC00555-201ENST00000569288 RNF123Q5XPI4 1314 aa12.49□□□□□ -0.41
LINC00555-201ENST00000569288 E9PSI1 815 aa12.49□□□□□ -0.41
LINC00555-201ENST00000569288 APAF1O14727 1248 aa12.49□□□□□ -0.41
LINC00555-201ENST00000569288 GCP02774 474 aa12.49□□□□□ -0.41
LINC00555-201ENST00000569288 FNBP4Q8N3X1 1017 aaPredicted RBP12.49□□□□□ -0.41
LINC00555-201ENST00000569288 TCP11L2Q8N4U5 519 aa12.49□□□□□ -0.41
LINC00555-201ENST00000569288 NRAPQ86VF7 1730 aa12.48□□□□□ -0.41
LINC00555-201ENST00000569288 NUTM2BA6NNL0 878 aaPredicted RBP12.48□□□□□ -0.41
LINC00555-201ENST00000569288 NUTM2EB1AL46 878 aaPredicted RBP12.48□□□□□ -0.41
LINC00555-201ENST00000569288 CT47B1P0C2W7 299 aaPredicted RBP12.48□□□□□ -0.41
LINC00555-201ENST00000569288 CALD1Q05682 793 aaKnown RBP12.48□□□□□ -0.41
LINC00555-201ENST00000569288 NUTM2AQ8IVF1 878 aaPredicted RBP12.48□□□□□ -0.41
LINC00555-201ENST00000569288 CABLES1Q8TDN4 633 aa12.48□□□□□ -0.41
LINC00555-201ENST00000569288 IP6K1Q92551 441 aa12.48□□□□□ -0.41
LINC00555-201ENST00000569288 ZRANB1Q9UGI0 708 aa12.48□□□□□ -0.41
LINC00555-201ENST00000569288 EMILIN1Q9Y6C2 1016 aa12.48□□□□□ -0.41
LINC00555-201ENST00000569288 MAP3K19Q56UN5 1328 aa12.47□□□□□ -0.41
LINC00555-201ENST00000569288 SLFN5Q08AF3 891 aa12.47□□□□□ -0.41
LINC00555-201ENST00000569288 LMOD3Q0VAK6 560 aa12.47□□□□□ -0.41
LINC00555-201ENST00000569288 WWC1Q8IX03 1113 aa12.47□□□□□ -0.41
LINC00555-201ENST00000569288 RSPH6AQ9H0K4 717 aa12.47□□□□□ -0.41
LINC00555-201ENST00000569288 RGPD5Q99666 1765 aa12.47□□□□□ -0.41
LINC00555-201ENST00000569288 MAPK8IP3Q9UPT6 1336 aa12.46□□□□□ -0.41
LINC00555-201ENST00000569288 HAP1P54257 671 aaPredicted RBP12.46□□□□□ -0.41
LINC00555-201ENST00000569288 MEX3CQ5U5Q3 659 aaKnown RBP12.46□□□□□ -0.41
LINC00555-201ENST00000569288 ARHGEF25Q86VW2 580 aa12.46□□□□□ -0.41
LINC00555-201ENST00000569288 KDRP35968 1356 aa12.45□□□□□ -0.42
LINC00555-201ENST00000569288 U2SURPO15042 1029 aaKnown RBP12.45□□□□□ -0.42
LINC00555-201ENST00000569288 HTATSF1O43719 755 aaKnown RBP12.45□□□□□ -0.42
LINC00555-201ENST00000569288 ADAMTS2O95450 1211 aa12.45□□□□□ -0.42
LINC00555-201ENST00000569288 TMPOP42166 694 aaKnown RBP12.45□□□□□ -0.42
LINC00555-201ENST00000569288 AMPHP49418 695 aa12.45□□□□□ -0.42
LINC00555-201ENST00000569288 EIF4A2Q14240 407 aaKnown RBP12.45□□□□□ -0.42
LINC00555-201ENST00000569288 RRS1Q15050 365 aaKnown RBP12.45□□□□□ -0.42
LINC00555-201ENST00000569288 NUTM2GQ5VZR2 741 aa12.45□□□□□ -0.42
LINC00555-201ENST00000569288 ZNF772Q68DY9 489 aaPredicted RBP12.45□□□□□ -0.42
LINC00555-201ENST00000569288 BCL9LQ86UU0 1499 aa12.45□□□□□ -0.42
LINC00555-201ENST00000569288 KIAA0232Q92628 1395 aa12.44□□□□□ -0.42
LINC00555-201ENST00000569288 FAM83GA6ND36 823 aa12.44□□□□□ -0.42
LINC00555-201ENST00000569288 PPM1GO15355 546 aaPredicted RBP12.44□□□□□ -0.42
LINC00555-201ENST00000569288 HOXC9P31274 260 aa12.44□□□□□ -0.42
LINC00555-201ENST00000569288 NGLY1Q96IV0 654 aa12.44□□□□□ -0.42
LINC00555-201ENST00000569288 C8orf37Q96NL8 207 aa12.44□□□□□ -0.42
LINC00555-201ENST00000569288 AFF2P51816 1311 aa12.43□□□□□ -0.42
LINC00555-201ENST00000569288 IGSF1Q8N6C5 1336 aa12.43□□□□□ -0.42
LINC00555-201ENST00000569288 FAM208AQ9UK61 1670 aaKnown RBP12.43□□□□□ -0.42
LINC00555-201ENST00000569288 NEFLP07196 543 aa12.43□□□□□ -0.42
LINC00555-201ENST00000569288 NFE2L2Q16236 605 aa12.43□□□□□ -0.42
LINC00555-201ENST00000569288 DUSP27Q5VZP5 1158 aa12.43□□□□□ -0.42
LINC00555-201ENST00000569288 ZNF428Q96B54 188 aa12.43□□□□□ -0.42
LINC00555-201ENST00000569288 MYH16Q9H6N6 1097 aa12.43□□□□□ -0.42
LINC00555-201ENST00000569288 PRDM11Q9NQV5 511 aa12.43□□□□□ -0.42
LINC00555-201ENST00000569288 RGS17Q9UGC6 210 aaPredicted RBP12.43□□□□□ -0.42
LINC00555-201ENST00000569288 CAMTA1Q9Y6Y1 1673 aa12.42□□□□□ -0.42
LINC00555-201ENST00000569288 HSP90AB2PQ58FF8 381 aa12.42□□□□□ -0.42
LINC00555-201ENST00000569288 UNC5CLQ8IV45 518 aa12.42□□□□□ -0.42
LINC00555-201ENST00000569288 GTF3C3Q9Y5Q9 886 aa12.42□□□□□ -0.42
LINC00555-201ENST00000569288 ATRNO75882 1429 aa12.41□□□□□ -0.42
LINC00555-201ENST00000569288 ZC3H6P61129 1189 aaKnown RBP12.41□□□□□ -0.42
LINC00555-201ENST00000569288 CCDC146Q8IYE0 955 aa12.41□□□□□ -0.42
LINC00555-201ENST00000569288 USP21Q9UK80 565 aa12.41□□□□□ -0.42
LINC00555-201ENST00000569288 FBLN1P23142 703 aa12.4□□□□□ -0.42
LINC00555-201ENST00000569288 PRKAR2BP31323 418 aa12.4□□□□□ -0.42
LINC00555-201ENST00000569288 BABAM1Q9NWV8 329 aa12.4□□□□□ -0.42
LINC00555-201ENST00000569288 TRPC5Q9UL62 973 aaPredicted RBP12.4□□□□□ -0.42
LINC00555-201ENST00000569288 COL5A2P05997 1499 aaPredicted RBP12.4□□□□□ -0.43
LINC00555-201ENST00000569288 RIPK4P57078 832 aa12.39□□□□□ -0.43
LINC00555-201ENST00000569288 VPS72Q15906 364 aa12.39□□□□□ -0.43
LINC00555-201ENST00000569288 GAS2L2Q8NHY3 880 aa12.39□□□□□ -0.43
LINC00555-201ENST00000569288 BTG4Q9NY30 223 aa12.39□□□□□ -0.43
LINC00555-201ENST00000569288 RCAN3Q9UKA8 241 aa12.39□□□□□ -0.43
LINC00555-201ENST00000569288 TRIM35Q9UPQ4 493 aa12.39□□□□□ -0.43
LINC00555-201ENST00000569288 NCAPD2Q15021 1401 aa12.38□□□□□ -0.43
LINC00555-201ENST00000569288 PEAK1Q9H792 1746 aa12.38□□□□□ -0.43
LINC00555-201ENST00000569288 SULT6B1Q6IMI4 303 aa12.38□□□□□ -0.43
LINC00555-201ENST00000569288 EYA1Q99502 592 aa12.38□□□□□ -0.43
LINC00555-201ENST00000569288 SUPT16HQ9Y5B9 1047 aaKnown RBP12.38□□□□□ -0.43
LINC00555-201ENST00000569288 WNK3Q9BYP7 1800 aa12.38□□□□□ -0.43
LINC00555-201ENST00000569288 GLI3P10071 1580 aa12.38□□□□□ -0.43
LINC00555-201ENST00000569288 AMOTQ4VCS5 1084 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms