RNA–Protein interactions for RNA: ENST00000568770.5

CDH13-211, Transcript of cadherin 13, humanhuman

TSL 4

Gene CDH13, Length 589 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-211ENST00000568770 KDM5DQ9BY66 1539 aa9.13□□□□□ -0.95
CDH13-211ENST00000568770 MED14O60244 1454 aa9.12□□□□□ -0.95
CDH13-211ENST00000568770 MBD5Q9P267 1494 aa9.12□□□□□ -0.95
CDH13-211ENST00000568770 NPHP4O75161 1426 aaPredicted RBP9.12□□□□□ -0.95
CDH13-211ENST00000568770 SYNMO15061 1565 aa9.12□□□□□ -0.95
CDH13-211ENST00000568770 DHX29Q7Z478 1369 aaKnown RBP9.12□□□□□ -0.95
CDH13-211ENST00000568770 ZC3H13Q5T200 1668 aaKnown RBP9.11□□□□□ -0.95
CDH13-211ENST00000568770 CD46P15529 392 aa9.11□□□□□ -0.95
CDH13-211ENST00000568770 THEMISQ8N1K5 641 aaPredicted RBP9.11□□□□□ -0.95
CDH13-211ENST00000568770 BEGAINQ9BUH8 593 aa9.11□□□□□ -0.95
CDH13-211ENST00000568770 RTEL1-TNFRSF6BF6WH68 1400 aa9.11□□□□□ -0.95
CDH13-211ENST00000568770 LRRC7Q96NW7 1537 aa9.1□□□□□ -0.95
CDH13-211ENST00000568770 FAM135AQ9P2D6 1515 aa9.1□□□□□ -0.95
CDH13-211ENST00000568770 WASHC2CQ9Y4E1 1318 aa9.1□□□□□ -0.95
CDH13-211ENST00000568770 NLRP1Q9C000 1473 aa9.1□□□□□ -0.95
CDH13-211ENST00000568770 KIF3BO15066 747 aa9.1□□□□□ -0.95
CDH13-211ENST00000568770 TMEM132AQ24JP5 1023 aa9.1□□□□□ -0.95
CDH13-211ENST00000568770 MTUS2Q5JR59 1369 aa9.1□□□□□ -0.95
CDH13-211ENST00000568770 MIA2Q96PC5 1412 aa9.09□□□□□ -0.95
CDH13-211ENST00000568770 STAC3Q96MF2 364 aa9.09□□□□□ -0.95
CDH13-211ENST00000568770 UBR1Q8IWV7 1749 aa9.08□□□□□ -0.96
CDH13-211ENST00000568770 BCAMP50895 628 aa9.08□□□□□ -0.96
CDH13-211ENST00000568770 RGS17Q9UGC6 210 aaPredicted RBP9.08□□□□□ -0.96
CDH13-211ENST00000568770 CEP152O94986 1710 aa9.08□□□□□ -0.96
CDH13-211ENST00000568770 EHBP1L1Q8N3D4 1523 aa9.07□□□□□ -0.96
CDH13-211ENST00000568770 HDGFP51858 240 aaKnown RBP9.07□□□□□ -0.96
CDH13-211ENST00000568770 SULF1Q8IWU6 871 aa9.07□□□□□ -0.96
CDH13-211ENST00000568770 RDH13Q8NBN7 331 aa9.07□□□□□ -0.96
CDH13-211ENST00000568770 DDRGK1Q96HY6 314 aa9.07□□□□□ -0.96
CDH13-211ENST00000568770 CCDC141Q6ZP82 1450 aa9.07□□□□□ -0.96
CDH13-211ENST00000568770 GOLGA8CPA6NN73 597 aa9.06□□□□□ -0.96
CDH13-211ENST00000568770 WNT2BQ93097 391 aa9.06□□□□□ -0.96
CDH13-211ENST00000568770 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.06□□□□□ -0.96
CDH13-211ENST00000568770 CAMSAP2Q08AD1 1489 aa9.06□□□□□ -0.96
CDH13-211ENST00000568770 SOWAHBA6NEL2 793 aa9.05□□□□□ -0.96
CDH13-211ENST00000568770 RNF40O75150 1001 aa9.05□□□□□ -0.96
CDH13-211ENST00000568770 GCGRP47871 477 aa9.05□□□□□ -0.96
CDH13-211ENST00000568770 LRCH3Q96II8 777 aa9.05□□□□□ -0.96
CDH13-211ENST00000568770 SETD1AO15047 1707 aaKnown RBP9.05□□□□□ -0.96
CDH13-211ENST00000568770 SLF2Q8IX21 1173 aa9.04□□□□□ -0.96
CDH13-211ENST00000568770 ANKK1Q8NFD2 765 aa9.04□□□□□ -0.96
CDH13-211ENST00000568770 SPIRE2Q8WWL2 714 aa9.04□□□□□ -0.96
CDH13-211ENST00000568770 TBC1D2Q9BYX2 928 aa9.04□□□□□ -0.96
CDH13-211ENST00000568770 ABCC3O15438 1527 aa9.04□□□□□ -0.96
CDH13-211ENST00000568770 CEP162Q5TB80 1403 aa9.04□□□□□ -0.96
CDH13-211ENST00000568770 ARHGEF5Q12774 1597 aa9.03□□□□□ -0.96
CDH13-211ENST00000568770 KCTD12Q96CX2 325 aaKnown RBP9.03□□□□□ -0.96
CDH13-211ENST00000568770 ROBO1Q9Y6N7 1651 aa9.03□□□□□ -0.96
CDH13-211ENST00000568770 ERVK-7P63135 1459 aa9.02□□□□□ -0.96
CDH13-211ENST00000568770 SCAF11Q99590 1463 aaKnown RBP9.02□□□□□ -0.96
CDH13-211ENST00000568770 MROH1Q8NDA8 1641 aa9.02□□□□□ -0.96
CDH13-211ENST00000568770 EIF2AK4Q9P2K8 1649 aaKnown RBP9.02□□□□□ -0.96
CDH13-211ENST00000568770 MYSM1Q5VVJ2 828 aa9.02□□□□□ -0.97
CDH13-211ENST00000568770 HPS5Q9UPZ3 1129 aa9.02□□□□□ -0.97
CDH13-211ENST00000568770 CFHP08603 1231 aa9.01□□□□□ -0.97
CDH13-211ENST00000568770 RSPH4AQ5TD94 716 aa9.01□□□□□ -0.97
CDH13-211ENST00000568770 POTEAQ6S8J7 498 aa9.01□□□□□ -0.97
CDH13-211ENST00000568770 THSD4Q6ZMP0 1018 aa9.01□□□□□ -0.97
CDH13-211ENST00000568770 POLR3EQ9NVU0 708 aa9.01□□□□□ -0.97
CDH13-211ENST00000568770 WBP1LQ9NX94 342 aa9.01□□□□□ -0.97
CDH13-211ENST00000568770 NCOA2Q15596 1464 aa9.01□□□□□ -0.97
CDH13-211ENST00000568770 NDUFV2P19404 249 aa9□□□□□ -0.97
CDH13-211ENST00000568770 SPNS2Q8IVW8 549 aa9□□□□□ -0.97
CDH13-211ENST00000568770 PROCA1Q8NCQ7 364 aaPredicted RBP9□□□□□ -0.97
CDH13-211ENST00000568770 HLA-CQ95604 372 aa9□□□□□ -0.97
CDH13-211ENST00000568770 PCDH10Q9P2E7 1040 aa9□□□□□ -0.97
CDH13-211ENST00000568770 SLIT1O75093 1534 aa9□□□□□ -0.97
CDH13-211ENST00000568770 MAST1Q9Y2H9 1570 aa8.99□□□□□ -0.97
CDH13-211ENST00000568770 PIK3C2BO00750 1634 aa8.99□□□□□ -0.97
CDH13-211ENST00000568770 MOXD2PA6NHM9 499 aa8.99□□□□□ -0.97
CDH13-211ENST00000568770 KDM4AO75164 1064 aa8.99□□□□□ -0.97
CDH13-211ENST00000568770 TSPY4P0CV99 314 aa8.99□□□□□ -0.97
CDH13-211ENST00000568770 TSPY10P0CW01 314 aa8.99□□□□□ -0.97
CDH13-211ENST00000568770 LTKP29376 864 aa8.99□□□□□ -0.97
CDH13-211ENST00000568770 APLP1P51693 650 aa8.99□□□□□ -0.97
CDH13-211ENST00000568770 PPP4CP60510 307 aa8.99□□□□□ -0.97
CDH13-211ENST00000568770 NUTM1Q86Y26 1132 aa8.99□□□□□ -0.97
CDH13-211ENST00000568770 TSR3Q9UJK0 312 aaKnown RBP8.99□□□□□ -0.97
CDH13-211ENST00000568770 ARHGAP23Q9P227 1491 aa8.99□□□□□ -0.97
CDH13-211ENST00000568770 PHLPP1O60346 1717 aa8.99□□□□□ -0.97
CDH13-211ENST00000568770 FAM135BQ49AJ0 1406 aa8.98□□□□□ -0.97
CDH13-211ENST00000568770 FUT2Q10981 343 aa8.98□□□□□ -0.97
CDH13-211ENST00000568770 SKIV2LQ15477 1246 aaKnown RBP8.98□□□□□ -0.97
CDH13-211ENST00000568770 SH3D19Q5HYK7 790 aa8.98□□□□□ -0.97
CDH13-211ENST00000568770 TXNDC2Q86VQ3 553 aa8.98□□□□□ -0.97
CDH13-211ENST00000568770 LIMD1Q9UGP4 676 aa8.98□□□□□ -0.97
CDH13-211ENST00000568770 GUCA2AQ02747 115 aa8.97□□□□□ -0.97
CDH13-211ENST00000568770 KDM5AP29375 1690 aaKnown RBP8.97□□□□□ -0.97
CDH13-211ENST00000568770 MAP3K1Q13233 1512 aa8.96□□□□□ -0.97
CDH13-211ENST00000568770 SLC4A3P48751 1232 aa8.96□□□□□ -0.98
CDH13-211ENST00000568770 PTPN5P54829 565 aa8.96□□□□□ -0.98
CDH13-211ENST00000568770 RSPH6AQ9H0K4 717 aa8.96□□□□□ -0.98
CDH13-211ENST00000568770 GOPCQ9HD26 462 aa8.96□□□□□ -0.98
CDH13-211ENST00000568770 PCDHB15Q9Y5E8 787 aa8.96□□□□□ -0.98
CDH13-211ENST00000568770 EID1Q9Y6B2 187 aa8.96□□□□□ -0.98
CDH13-211ENST00000568770 TMEM94Q12767 1356 aa8.96□□□□□ -0.98
CDH13-211ENST00000568770 HOXA2O43364 376 aa8.95□□□□□ -0.98
CDH13-211ENST00000568770 PUS10Q3MIT2 529 aaKnown RBP8.95□□□□□ -0.98
CDH13-211ENST00000568770 RIC3Q7Z5B4 369 aa8.95□□□□□ -0.98
CDH13-211ENST00000568770 PCDHGC3Q9UN70 934 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms